RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 BCORQ6W2J9 1755 aa-0.57□□□□□ -2.5
SMAD4-207ENST00000589076 MYH4Q9Y623 1939 aa-0.57□□□□□ -2.5
SMAD4-207ENST00000589076 TMEM218A2RU14 115 aa-0.57□□□□□ -2.5
SMAD4-207ENST00000589076 H7BZZ5 65 aa-0.57□□□□□ -2.5
SMAD4-207ENST00000589076 I3L3M4 83 aa-0.57□□□□□ -2.5
SMAD4-207ENST00000589076 UQCRHP07919 91 aa-0.57□□□□□ -2.5
SMAD4-207ENST00000589076 GNGT1P63211 74 aa-0.57□□□□□ -2.5
SMAD4-207ENST00000589076 TCEAL7Q9BRU2 100 aa-0.57□□□□□ -2.5
SMAD4-207ENST00000589076 ALS2Q96Q42 1657 aa-0.58□□□□□ -2.5
SMAD4-207ENST00000589076 DEFB124Q8NES8 71 aa-0.58□□□□□ -2.5
SMAD4-207ENST00000589076 PMCHL2Q9BQD1 86 aa-0.58□□□□□ -2.5
SMAD4-207ENST00000589076 NRAPQ86VF7 1730 aa-0.58□□□□□ -2.5
SMAD4-207ENST00000589076 MYO3AQ8NEV4 1616 aa-0.59□□□□□ -2.5
SMAD4-207ENST00000589076 ATOX1O00244 68 aa-0.59□□□□□ -2.5
SMAD4-207ENST00000589076 TRGV9Q99603 122 aa-0.59□□□□□ -2.5
SMAD4-207ENST00000589076 DDX60LQ5H9U9 1706 aaKnown RBP-0.59□□□□□ -2.5
SMAD4-207ENST00000589076 ANKRD36BQ8N2N9 1353 aa-0.59□□□□□ -2.5
SMAD4-207ENST00000589076 PLXNC1O60486 1568 aa-0.6□□□□□ -2.51
SMAD4-207ENST00000589076 TRAV30A0A087WSZ9 112 aa-0.6□□□□□ -2.51
SMAD4-207ENST00000589076 KRTAP19-8Q3LI54 63 aa-0.6□□□□□ -2.51
SMAD4-207ENST00000589076 H1FX-AS1Q4G0G2 97 aa-0.6□□□□□ -2.51
SMAD4-207ENST00000589076 C14orf144Q96I85 54 aa-0.6□□□□□ -2.51
SMAD4-207ENST00000589076 AP4S1Q9Y587 144 aa-0.6□□□□□ -2.51
SMAD4-207ENST00000589076 ABCC6O95255 1503 aa-0.6□□□□□ -2.51
SMAD4-207ENST00000589076 AGLP35573 1532 aa-0.6□□□□□ -2.51
SMAD4-207ENST00000589076 CLIP1P30622 1438 aa-0.61□□□□□ -2.51
SMAD4-207ENST00000589076 LMO7Q8WWI1 1683 aa-0.61□□□□□ -2.51
SMAD4-207ENST00000589076 MT2AP02795 61 aa-0.61□□□□□ -2.51
SMAD4-207ENST00000589076 MT-ATP8P03928 68 aa-0.61□□□□□ -2.51
SMAD4-207ENST00000589076 MT1FP04733 61 aa-0.61□□□□□ -2.51
SMAD4-207ENST00000589076 ARMS2P0C7Q2 107 aa-0.61□□□□□ -2.51
SMAD4-207ENST00000589076 KRTAP6-2Q3LI66 62 aa-0.61□□□□□ -2.51
SMAD4-207ENST00000589076 C4AP0C0L4 1744 aa-0.61□□□□□ -2.51
SMAD4-207ENST00000589076 C4BP0C0L5 1744 aa-0.61□□□□□ -2.51
SMAD4-207ENST00000589076 MROH1Q8NDA8 1641 aa-0.62□□□□□ -2.51
SMAD4-207ENST00000589076 S100A10P60903 97 aa-0.62□□□□□ -2.51
SMAD4-207ENST00000589076 DEFB135Q30KP9 77 aa-0.62□□□□□ -2.51
SMAD4-207ENST00000589076 SERP2Q8N6R1 65 aa-0.62□□□□□ -2.51
SMAD4-207ENST00000589076 CNTLNQ9NXG0 1405 aa-0.63□□□□□ -2.51
SMAD4-207ENST00000589076 AKAP12Q02952 1782 aa-0.63□□□□□ -2.51
SMAD4-207ENST00000589076 CCL22O00626 93 aa-0.64□□□□□ -2.51
SMAD4-207ENST00000589076 LINC00032P0C843 101 aa-0.64□□□□□ -2.51
SMAD4-207ENST00000589076 MRPL34Q9BQ48 92 aaKnown RBP-0.64□□□□□ -2.51
SMAD4-207ENST00000589076 TRPM2O94759 1503 aa-0.64□□□□□ -2.51
SMAD4-207ENST00000589076 DEFB121Q5J5C9 76 aa-0.65□□□□□ -2.51
SMAD4-207ENST00000589076 MYO5CQ9NQX4 1742 aa-0.66□□□□□ -2.51
SMAD4-207ENST00000589076 SPTY2D1-AS1A0A0U1RR47 76 aa-0.66□□□□□ -2.52
SMAD4-207ENST00000589076 RBP2P50120 134 aa-0.66□□□□□ -2.52
SMAD4-207ENST00000589076 HMGN3Q15651 99 aa-0.66□□□□□ -2.52
SMAD4-207ENST00000589076 ANKRD50Q9ULJ7 1429 aa-0.66□□□□□ -2.52
SMAD4-207ENST00000589076 TRBV7-7A0A0K0K1E9 115 aa-0.67□□□□□ -2.52
SMAD4-207ENST00000589076 ATP6V1G2-DDX39BF2Z307 99 aa-0.67□□□□□ -2.52
SMAD4-207ENST00000589076 ETDBQ3ZM63 59 aa-0.67□□□□□ -2.52
SMAD4-207ENST00000589076 C9orf62Q8N4C0 152 aa-0.67□□□□□ -2.52
SMAD4-207ENST00000589076 LMTK2Q8IWU2 1503 aa-0.68□□□□□ -2.52
SMAD4-207ENST00000589076 UQCRHLA0A096LP55 91 aa-0.68□□□□□ -2.52
SMAD4-207ENST00000589076 CDC42BPAQ5VT25 1732 aa-0.68□□□□□ -2.52
SMAD4-207ENST00000589076 ALKAL2Q6UX46 152 aa-0.68□□□□□ -2.52
SMAD4-207ENST00000589076 ZNF720Q7Z2F6 126 aa-0.68□□□□□ -2.52
SMAD4-207ENST00000589076 ACBD7Q8N6N7 88 aa-0.68□□□□□ -2.52
SMAD4-207ENST00000589076 DPY30Q9C005 99 aa-0.68□□□□□ -2.52
SMAD4-207ENST00000589076 INO80Q9ULG1 1556 aaPredicted RBP-0.69□□□□□ -2.52
SMAD4-207ENST00000589076 COL5A1-AS1Q5SY13 56 aa-0.69□□□□□ -2.52
SMAD4-207ENST00000589076 HEPN1Q6WQI6 88 aa-0.7□□□□□ -2.52
SMAD4-207ENST00000589076 ATP7AQ04656 1500 aa-0.7□□□□□ -2.52
SMAD4-207ENST00000589076 D6R8Y8 96 aa-0.71□□□□□ -2.52
SMAD4-207ENST00000589076 F8WEM9 126 aa-0.71□□□□□ -2.52
SMAD4-207ENST00000589076 LEPROTL1O95214 131 aa-0.71□□□□□ -2.52
SMAD4-207ENST00000589076 MUSTN1Q8IVN3 82 aa-0.71□□□□□ -2.52
SMAD4-207ENST00000589076 ERICH3Q5RHP9 1530 aa-0.71□□□□□ -2.52
SMAD4-207ENST00000589076 ARHGAP35Q9NRY4 1499 aa-0.72□□□□□ -2.52
SMAD4-207ENST00000589076 FAUP35544 74 aaKnown RBP-0.72□□□□□ -2.52
SMAD4-207ENST00000589076 PSENENQ9NZ42 101 aa-0.72□□□□□ -2.52
SMAD4-207ENST00000589076 CDKN2A-AS1Q9UH64 79 aa-0.72□□□□□ -2.52
SMAD4-207ENST00000589076 IGLC2P0DOY2 106 aa-0.73□□□□□ -2.53
SMAD4-207ENST00000589076 IGLC3P0DOY3 106 aa-0.73□□□□□ -2.53
SMAD4-207ENST00000589076 HIGD1BQ9P298 99 aa-0.74□□□□□ -2.53
SMAD4-207ENST00000589076 UBE2D4Q9Y2X8 147 aa-0.74□□□□□ -2.53
SMAD4-207ENST00000589076 URB2Q14146 1524 aaKnown RBP-0.74□□□□□ -2.53
SMAD4-207ENST00000589076 PIK3C2BO00750 1634 aa-0.75□□□□□ -2.53
SMAD4-207ENST00000589076 DEFB112Q30KQ8 113 aa-0.75□□□□□ -2.53
SMAD4-207ENST00000589076 NCMAPQ5T1S8 102 aa-0.75□□□□□ -2.53
SMAD4-207ENST00000589076 VPS8Q8N3P4 1428 aa-0.75□□□□□ -2.53
SMAD4-207ENST00000589076 CCDC180Q9P1Z9 1646 aa-0.75□□□□□ -2.53
SMAD4-207ENST00000589076 ABCC1P33527 1531 aa-0.76□□□□□ -2.53
SMAD4-207ENST00000589076 CDC42BPGQ6DT37 1551 aa-0.76□□□□□ -2.53
SMAD4-207ENST00000589076 M0R143 59 aa-0.77□□□□□ -2.53
SMAD4-207ENST00000589076 WFDC13Q8IUB5 93 aa-0.77□□□□□ -2.53
SMAD4-207ENST00000589076 CFAP74Q9C0B2 1584 aa-0.78□□□□□ -2.53
SMAD4-207ENST00000589076 FAM208AQ9UK61 1670 aaKnown RBP-0.78□□□□□ -2.53
SMAD4-207ENST00000589076 DUOX1Q9NRD9 1551 aa-0.79□□□□□ -2.54
SMAD4-207ENST00000589076 NMSQ5H8A3 153 aa-0.79□□□□□ -2.54
SMAD4-207ENST00000589076 MROH2AA6NES4 1674 aa-0.8□□□□□ -2.54
SMAD4-207ENST00000589076 H0YGG7 62 aa-0.8□□□□□ -2.54
SMAD4-207ENST00000589076 COX7BP24311 80 aa-0.8□□□□□ -2.54
SMAD4-207ENST00000589076 CEP162Q5TB80 1403 aa-0.81□□□□□ -2.54
SMAD4-207ENST00000589076 RRBP1Q9P2E9 1410 aaKnown RBP-0.81□□□□□ -2.54
SMAD4-207ENST00000589076 GYPAP02724 150 aa-0.82□□□□□ -2.54
SMAD4-207ENST00000589076 HMGN2P05204 90 aaKnown RBP-0.82□□□□□ -2.54
SMAD4-207ENST00000589076 SMIM11AP58511 58 aa-0.82□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms