RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 PRO0628Q9UI54 55 aa8.56□□□□□ -1.04
NEDD4L-223ENST00000588516 LORP23490 312 aaPredicted RBP8.55□□□□□ -1.04
NEDD4L-223ENST00000588516 LINC00208Q96KT6 92 aa8.55□□□□□ -1.04
NEDD4L-223ENST00000588516 PLAC8Q9NZF1 115 aa8.55□□□□□ -1.04
NEDD4L-223ENST00000588516 HSPG2P98160 4391 aa8.55□□□□□ -1.04
NEDD4L-223ENST00000588516 RTL8CO15255 209 aa8.54□□□□□ -1.04
NEDD4L-223ENST00000588516 DNAH17Q9UFH2 4485 aa8.54□□□□□ -1.04
NEDD4L-223ENST00000588516 IGLV5-52A0A0A0MRZ9 124 aa8.54□□□□□ -1.04
NEDD4L-223ENST00000588516 ZNF861PO60384 105 aa8.54□□□□□ -1.04
NEDD4L-223ENST00000588516 C1orf64Q8NEQ6 169 aa8.54□□□□□ -1.04
NEDD4L-223ENST00000588516 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.54□□□□□ -1.04
NEDD4L-223ENST00000588516 Q1T7F1 81 aa8.53□□□□□ -1.04
NEDD4L-223ENST00000588516 IGLV9-49A0A0B4J1Y8 123 aa8.52□□□□□ -1.05
NEDD4L-223ENST00000588516 MMP24-AS1A0A0U1RRL7 71 aa8.52□□□□□ -1.05
NEDD4L-223ENST00000588516 Q6ZR54 194 aa8.52□□□□□ -1.05
NEDD4L-223ENST00000588516 PANO1I0J062 215 aa8.51□□□□□ -1.05
NEDD4L-223ENST00000588516 C1orf134Q5TEV5 83 aa8.5□□□□□ -1.05
NEDD4L-223ENST00000588516 Q8N1X5 172 aa8.49□□□□□ -1.05
NEDD4L-223ENST00000588516 MPLKIPQ8TAP9 179 aa8.49□□□□□ -1.05
NEDD4L-223ENST00000588516 PSORS1C2Q9UIG4 136 aa8.49□□□□□ -1.05
NEDD4L-223ENST00000588516 DMBT1Q9UGM3 2413 aaPredicted RBP8.48□□□□□ -1.05
NEDD4L-223ENST00000588516 CD164Q04900 197 aa8.48□□□□□ -1.05
NEDD4L-223ENST00000588516 ASB16-AS1Q495Z4 193 aa8.48□□□□□ -1.05
NEDD4L-223ENST00000588516 FAM229BQ4G0N7 80 aa8.48□□□□□ -1.05
NEDD4L-223ENST00000588516 C8orf17Q9NRJ1 99 aa8.48□□□□□ -1.05
NEDD4L-223ENST00000588516 A0A1B0GVX0 72 aa8.47□□□□□ -1.05
NEDD4L-223ENST00000588516 PKD1P98161 4303 aa8.46□□□□□ -1.05
NEDD4L-223ENST00000588516 C1orf195Q5TG92 126 aa8.46□□□□□ -1.06
NEDD4L-223ENST00000588516 Q96NJ1 140 aa8.45□□□□□ -1.06
NEDD4L-223ENST00000588516 SSBP3-AS1Q7Z2R9 100 aa8.44□□□□□ -1.06
NEDD4L-223ENST00000588516 IGLV7-46A0A075B6I9 117 aa8.41□□□□□ -1.06
NEDD4L-223ENST00000588516 IGLV7-43P04211 117 aa8.41□□□□□ -1.06
NEDD4L-223ENST00000588516 MRPL34Q9BQ48 92 aaKnown RBP8.41□□□□□ -1.06
NEDD4L-223ENST00000588516 LIMD2Q9BT23 127 aa8.4□□□□□ -1.06
NEDD4L-223ENST00000588516 LRP1BQ9NZR2 4599 aa8.39□□□□□ -1.07
NEDD4L-223ENST00000588516 IGHV6-1A0A0B4J1U7 121 aa8.39□□□□□ -1.07
NEDD4L-223ENST00000588516 BRK1Q8WUW1 75 aa8.39□□□□□ -1.07
NEDD4L-223ENST00000588516 C8orf87E5RJ46 101 aa8.38□□□□□ -1.07
NEDD4L-223ENST00000588516 UBR4Q5T4S7 5183 aa8.38□□□□□ -1.07
NEDD4L-223ENST00000588516 NDUFS5O43920 106 aa8.37□□□□□ -1.07
NEDD4L-223ENST00000588516 PRR4Q16378 134 aa8.37□□□□□ -1.07
NEDD4L-223ENST00000588516 APOBP04114 4563 aaKnown RBP8.36□□□□□ -1.07
NEDD4L-223ENST00000588516 LOC101927531A0A1B0GV80 90 aa8.35□□□□□ -1.07
NEDD4L-223ENST00000588516 DNAH5Q8TE73 4624 aa8.32□□□□□ -1.08
NEDD4L-223ENST00000588516 COA5Q86WW8 74 aa8.29□□□□□ -1.08
NEDD4L-223ENST00000588516 CIRBP-AS1Q8TBR5 109 aa8.29□□□□□ -1.08
NEDD4L-223ENST00000588516 Q8N9P0 234 aaPredicted RBP8.27□□□□□ -1.09
NEDD4L-223ENST00000588516 FLG2Q5D862 2391 aaPredicted RBP8.26□□□□□ -1.09
NEDD4L-223ENST00000588516 PCOTHQ58A44 107 aa8.26□□□□□ -1.09
NEDD4L-223ENST00000588516 ANAPC11Q9NYG5 84 aa8.26□□□□□ -1.09
NEDD4L-223ENST00000588516 PSPHP1O15172 72 aa8.25□□□□□ -1.09
NEDD4L-223ENST00000588516 SPINK6Q6UWN8 80 aa8.24□□□□□ -1.09
NEDD4L-223ENST00000588516 SRRM2Q9UQ35 2752 aaKnown RBP8.23□□□□□ -1.09
NEDD4L-223ENST00000588516 FAM229AH3BQW9 127 aa8.22□□□□□ -1.09
NEDD4L-223ENST00000588516 Q5VSD8 79 aa8.22□□□□□ -1.09
NEDD4L-223ENST00000588516 A8MUN3 132 aa8.21□□□□□ -1.1
NEDD4L-223ENST00000588516 LINC00313P59037 77 aa8.21□□□□□ -1.1
NEDD4L-223ENST00000588516 MYCBP2O75592 4640 aa8.21□□□□□ -1.1
NEDD4L-223ENST00000588516 Q6ZSA8 131 aa8.2□□□□□ -1.1
NEDD4L-223ENST00000588516 Q75L30 129 aa8.19□□□□□ -1.1
NEDD4L-223ENST00000588516 PRR15LQ9BU68 103 aa8.19□□□□□ -1.1
NEDD4L-223ENST00000588516 KRTAP10-2P60368 255 aa8.18□□□□□ -1.1
NEDD4L-223ENST00000588516 Q5VV11 94 aa8.18□□□□□ -1.1
NEDD4L-223ENST00000588516 LINC01558Q9Y6Z2 57 aa8.18□□□□□ -1.1
NEDD4L-223ENST00000588516 FAT1Q14517 4588 aa8.18□□□□□ -1.1
NEDD4L-223ENST00000588516 CHKB-CPT1BH3BT56 60 aa8.17□□□□□ -1.1
NEDD4L-223ENST00000588516 ACYP2P14621 99 aa8.17□□□□□ -1.1
NEDD4L-223ENST00000588516 A0A087X002 238 aa8.15□□□□□ -1.1
NEDD4L-223ENST00000588516 NOTCH2NLQ7Z3S9 236 aa8.15□□□□□ -1.1
NEDD4L-223ENST00000588516 KRTAP13-3Q3SY46 172 aa8.14□□□□□ -1.11
NEDD4L-223ENST00000588516 HRES1P13985 223 aa8.12□□□□□ -1.11
NEDD4L-223ENST00000588516 SMR3BP02814 79 aaPredicted RBP8.11□□□□□ -1.11
NEDD4L-223ENST00000588516 Q5W150 140 aa8.09□□□□□ -1.11
NEDD4L-223ENST00000588516 A6NED7 52 aa8.08□□□□□ -1.12
NEDD4L-223ENST00000588516 SPINK1P00995 79 aa8.08□□□□□ -1.12
NEDD4L-223ENST00000588516 KRTAP10-1P60331 282 aa8.08□□□□□ -1.12
NEDD4L-223ENST00000588516 KRTAP13-2Q52LG2 175 aa8.08□□□□□ -1.12
NEDD4L-223ENST00000588516 XP32Q5T750 250 aa8.08□□□□□ -1.12
NEDD4L-223ENST00000588516 VPS13BQ7Z7G8 4022 aa8.07□□□□□ -1.12
NEDD4L-223ENST00000588516 HMCN2Q8NDA2 5059 aa8.06□□□□□ -1.12
NEDD4L-223ENST00000588516 RPS29P62273 56 aaKnown RBP8.06□□□□□ -1.12
NEDD4L-223ENST00000588516 SPAG11AQ6PDA7 123 aa8.06□□□□□ -1.12
NEDD4L-223ENST00000588516 ATP11AUNQ6ZP68 121 aa8.06□□□□□ -1.12
NEDD4L-223ENST00000588516 IGKV2-30P06310 120 aa8.05□□□□□ -1.12
NEDD4L-223ENST00000588516 DMAC1Q96GE9 116 aa8.05□□□□□ -1.12
NEDD4L-223ENST00000588516 TYMSOSQ8TAI1 123 aa8.03□□□□□ -1.12
NEDD4L-223ENST00000588516 CDC42SE1Q9NRR8 79 aa8.03□□□□□ -1.12
NEDD4L-223ENST00000588516 PLA2G1BP04054 148 aaKnown RBP8.03□□□□□ -1.12
NEDD4L-223ENST00000588516 DNAH8Q96JB1 4490 aa8.02□□□□□ -1.13
NEDD4L-223ENST00000588516 KRTAP1-4P0C5Y4 121 aa8.02□□□□□ -1.13
NEDD4L-223ENST00000588516 PMAIP1Q13794 54 aa8.01□□□□□ -1.13
NEDD4L-223ENST00000588516 PRR26Q8N8Z3 221 aa8.01□□□□□ -1.13
NEDD4L-223ENST00000588516 KRTAP16-1A8MUX0 517 aa7.99□□□□□ -1.13
NEDD4L-223ENST00000588516 KRTAP4-8Q9BYQ9 185 aa7.94□□□□□ -1.14
NEDD4L-223ENST00000588516 LINC00304Q8N9R0 145 aa7.93□□□□□ -1.14
NEDD4L-223ENST00000588516 LCA10Q71F78 164 aa7.92□□□□□ -1.14
NEDD4L-223ENST00000588516 SPTSSBQ8NFR3 76 aa7.91□□□□□ -1.14
NEDD4L-223ENST00000588516 IGKV2D-30A0A075B6S6 120 aa7.88□□□□□ -1.15
NEDD4L-223ENST00000588516 A0A1B0GU69 56 aa7.88□□□□□ -1.15
NEDD4L-223ENST00000588516 SEC61GP60059 68 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms