RNA–Protein interactions for RNA: ENST00000584483.5

SMARCD2-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 821 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-211ENST00000584483 NOTCH2NLQ7Z3S9 236 aa7.98□□□□□ -1.13
SMARCD2-211ENST00000584483 PRR15Q8IV56 129 aa7.97□□□□□ -1.13
SMARCD2-211ENST00000584483 A0A1B0GVX0 72 aa7.96□□□□□ -1.14
SMARCD2-211ENST00000584483 A0A087WVE0 104 aa7.95□□□□□ -1.14
SMARCD2-211ENST00000584483 IGHV6-1A0A0B4J1U7 121 aa7.93□□□□□ -1.14
SMARCD2-211ENST00000584483 HIST1H4AP62805 103 aaKnown RBP7.92□□□□□ -1.14
SMARCD2-211ENST00000584483 MMP24-AS1A0A0U1RRL7 71 aa7.91□□□□□ -1.14
SMARCD2-211ENST00000584483 NDUFB1O75438 58 aa7.91□□□□□ -1.14
SMARCD2-211ENST00000584483 C8orf17Q9NRJ1 99 aa7.91□□□□□ -1.14
SMARCD2-211ENST00000584483 FP248Q71RG6 208 aaPredicted RBP7.9□□□□□ -1.14
SMARCD2-211ENST00000584483 IMUPQ9GZP8 106 aa7.9□□□□□ -1.14
SMARCD2-211ENST00000584483 IGLV7-46A0A075B6I9 117 aa7.89□□□□□ -1.15
SMARCD2-211ENST00000584483 PRR4Q16378 134 aa7.88□□□□□ -1.15
SMARCD2-211ENST00000584483 C9orf92A6NGG3 77 aa7.87□□□□□ -1.15
SMARCD2-211ENST00000584483 KRTAP16-1A8MUX0 517 aa7.87□□□□□ -1.15
SMARCD2-211ENST00000584483 LINC00313P59037 77 aa7.86□□□□□ -1.15
SMARCD2-211ENST00000584483 HCG22E2RYF7 251 aa7.85□□□□□ -1.15
SMARCD2-211ENST00000584483 KRTAP13-3Q3SY46 172 aa7.85□□□□□ -1.15
SMARCD2-211ENST00000584483 WFDC13Q8IUB5 93 aa7.85□□□□□ -1.15
SMARCD2-211ENST00000584483 C8orf87E5RJ46 101 aa7.84□□□□□ -1.15
SMARCD2-211ENST00000584483 CASC2Q6XLA1 102 aa7.82□□□□□ -1.16
SMARCD2-211ENST00000584483 HERC1Q15751 4861 aa7.81□□□□□ -1.16
SMARCD2-211ENST00000584483 hDV103S1A0JD37 113 aa7.81□□□□□ -1.16
SMARCD2-211ENST00000584483 FAM236AA0A1B0GUQ0 79 aa7.79□□□□□ -1.16
SMARCD2-211ENST00000584483 FAM236BA0A1B0GV22 79 aa7.79□□□□□ -1.16
SMARCD2-211ENST00000584483 TMEM254Q8TBM7 123 aa7.79□□□□□ -1.16
SMARCD2-211ENST00000584483 TPRXLQ17RH7 258 aa7.78□□□□□ -1.16
SMARCD2-211ENST00000584483 MRPL34Q9BQ48 92 aaKnown RBP7.78□□□□□ -1.16
SMARCD2-211ENST00000584483 LPAP08519 4548 aa7.77□□□□□ -1.17
SMARCD2-211ENST00000584483 XP32Q5T750 250 aa7.75□□□□□ -1.17
SMARCD2-211ENST00000584483 Q8N9P0 234 aaPredicted RBP7.75□□□□□ -1.17
SMARCD2-211ENST00000584483 A8MUU9 505 aa7.74□□□□□ -1.17
SMARCD2-211ENST00000584483 C20orf166-AS1Q96NR2 134 aa7.74□□□□□ -1.17
SMARCD2-211ENST00000584483 HMCN2Q8NDA2 5059 aa7.71□□□□□ -1.18
SMARCD2-211ENST00000584483 OCR1Q9BZK8 76 aa7.7□□□□□ -1.18
SMARCD2-211ENST00000584483 NDUFS5O43920 106 aa7.68□□□□□ -1.18
SMARCD2-211ENST00000584483 SCGB1A1P11684 91 aa7.68□□□□□ -1.18
SMARCD2-211ENST00000584483 Q5W150 140 aa7.67□□□□□ -1.18
SMARCD2-211ENST00000584483 Q75L30 129 aa7.67□□□□□ -1.18
SMARCD2-211ENST00000584483 RPL37P61927 97 aaKnown RBP7.66□□□□□ -1.18
SMARCD2-211ENST00000584483 LRP2P98164 4655 aa7.66□□□□□ -1.18
SMARCD2-211ENST00000584483 ATOX1O00244 68 aa7.64□□□□□ -1.19
SMARCD2-211ENST00000584483 TP53AIP1Q9HCN2 124 aa7.62□□□□□ -1.19
SMARCD2-211ENST00000584483 TRAV7A0A075B6U4 112 aa7.61□□□□□ -1.19
SMARCD2-211ENST00000584483 UQCRQO14949 82 aa7.6□□□□□ -1.19
SMARCD2-211ENST00000584483 ZCCHC13Q8WW36 166 aaKnown RBP7.6□□□□□ -1.19
SMARCD2-211ENST00000584483 SMIM20Q8N5G0 67 aa7.58□□□□□ -1.2
SMARCD2-211ENST00000584483 SERP2Q8N6R1 65 aa7.57□□□□□ -1.2
SMARCD2-211ENST00000584483 PCOTHQ58A44 107 aa7.56□□□□□ -1.2
SMARCD2-211ENST00000584483 ANAPC13Q9BS18 74 aa7.55□□□□□ -1.2
SMARCD2-211ENST00000584483 MUC17Q685J3 4493 aa7.54□□□□□ -1.2
SMARCD2-211ENST00000584483 TRAV22A0A0B4J277 110 aa7.54□□□□□ -1.2
SMARCD2-211ENST00000584483 H0Y9P7 68 aa7.54□□□□□ -1.2
SMARCD2-211ENST00000584483 ATP11AUNQ6ZP68 121 aa7.54□□□□□ -1.2
SMARCD2-211ENST00000584483 COX7CP15954 63 aa7.52□□□□□ -1.21
SMARCD2-211ENST00000584483 C5orf47Q569G3 176 aa7.52□□□□□ -1.21
SMARCD2-211ENST00000584483 KRTAP4-1Q9BYQ7 146 aa7.5□□□□□ -1.21
SMARCD2-211ENST00000584483 A0A0U1RQV1 116 aa7.48□□□□□ -1.21
SMARCD2-211ENST00000584483 LINC00208Q96KT6 92 aa7.48□□□□□ -1.21
SMARCD2-211ENST00000584483 CCDC179H3BU77 68 aa7.47□□□□□ -1.21
SMARCD2-211ENST00000584483 IGKV2-30P06310 120 aa7.47□□□□□ -1.21
SMARCD2-211ENST00000584483 SEC61BP60468 96 aaKnown RBP7.47□□□□□ -1.21
SMARCD2-211ENST00000584483 C20orf197Q8N268 126 aa7.46□□□□□ -1.22
SMARCD2-211ENST00000584483 C1orf64Q8NEQ6 169 aa7.46□□□□□ -1.22
SMARCD2-211ENST00000584483 MP68P56378 58 aa7.45□□□□□ -1.22
SMARCD2-211ENST00000584483 SNURFQ9Y675 71 aa7.45□□□□□ -1.22
SMARCD2-211ENST00000584483 IGKV2D-30A0A075B6S6 120 aa7.44□□□□□ -1.22
SMARCD2-211ENST00000584483 SPINK7P58062 85 aa7.44□□□□□ -1.22
SMARCD2-211ENST00000584483 CYP4F30PQ9H0H9 118 aa7.44□□□□□ -1.22
SMARCD2-211ENST00000584483 H3BPC8 53 aa7.43□□□□□ -1.22
SMARCD2-211ENST00000584483 CYSTM1Q9H1C7 97 aa7.43□□□□□ -1.22
SMARCD2-211ENST00000584483 KLKP1Q107X0 134 aa7.42□□□□□ -1.22
SMARCD2-211ENST00000584483 LOC101927531A0A1B0GV80 90 aa7.41□□□□□ -1.22
SMARCD2-211ENST00000584483 PCP4P48539 62 aa7.4□□□□□ -1.22
SMARCD2-211ENST00000584483 C7orf65Q6ZTY9 151 aa7.39□□□□□ -1.23
SMARCD2-211ENST00000584483 HRES1P13985 223 aa7.37□□□□□ -1.23
SMARCD2-211ENST00000584483 UBR4Q5T4S7 5183 aa7.35□□□□□ -1.23
SMARCD2-211ENST00000584483 RNF213Q63HN8 5207 aa7.33□□□□□ -1.24
SMARCD2-211ENST00000584483 MPLKIPQ8TAP9 179 aa7.32□□□□□ -1.24
SMARCD2-211ENST00000584483 H7BZZ5 65 aa7.3□□□□□ -1.24
SMARCD2-211ENST00000584483 C4orf26Q17RF5 130 aa7.29□□□□□ -1.24
SMARCD2-211ENST00000584483 KRTAP19-2Q3LHN2 52 aa7.27□□□□□ -1.25
SMARCD2-211ENST00000584483 KRTAP3-1Q9BYR8 98 aa7.27□□□□□ -1.25
SMARCD2-211ENST00000584483 MUC2Q02817 5179 aa7.26□□□□□ -1.25
SMARCD2-211ENST00000584483 NDUFC1O43677 76 aa7.23□□□□□ -1.25
SMARCD2-211ENST00000584483 COX6B2Q6YFQ2 88 aa7.21□□□□□ -1.26
SMARCD2-211ENST00000584483 SPANXA2-OT1Q8N9U9 137 aa7.19□□□□□ -1.26
SMARCD2-211ENST00000584483 LCE2CQ5TA81 110 aa7.16□□□□□ -1.26
SMARCD2-211ENST00000584483 DMAC1Q96GE9 116 aa7.15□□□□□ -1.26
SMARCD2-211ENST00000584483 RBM12B-AS1Q9P1G2 102 aa7.15□□□□□ -1.26
SMARCD2-211ENST00000584483 TMEM258P61165 79 aa7.1□□□□□ -1.27
SMARCD2-211ENST00000584483 FAM236DA0A1B0GTK5 79 aa7.09□□□□□ -1.27
SMARCD2-211ENST00000584483 FAM236CP0DP71 79 aa7.09□□□□□ -1.27
SMARCD2-211ENST00000584483 H1FX-AS1Q4G0G2 97 aa7.09□□□□□ -1.27
SMARCD2-211ENST00000584483 A8MUN3 132 aa7.07□□□□□ -1.28
SMARCD2-211ENST00000584483 ACYP2P14621 99 aa7.04□□□□□ -1.28
SMARCD2-211ENST00000584483 FLGP20930 4061 aaPredicted RBP7.03□□□□□ -1.28
SMARCD2-211ENST00000584483 FAT4Q6V0I7 4981 aa7.02□□□□□ -1.29
SMARCD2-211ENST00000584483 ATP5EP56381 51 aaPredicted RBP7.02□□□□□ -1.29
SMARCD2-211ENST00000584483 KRTAP3-3Q9BYR6 98 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms