RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 SSBP3-AS1Q7Z2R9 100 aa6.41□□□□□ -1.38
TOP3A-216ENST00000583804 Q8NBF4 154 aa6.41□□□□□ -1.38
TOP3A-216ENST00000583804 SMIM20Q8N5G0 67 aa6.4□□□□□ -1.39
TOP3A-216ENST00000583804 DMBT1Q9UGM3 2413 aaPredicted RBP6.39□□□□□ -1.39
TOP3A-216ENST00000583804 LINC00304Q8N9R0 145 aa6.38□□□□□ -1.39
TOP3A-216ENST00000583804 TNXBP22105 4242 aa6.38□□□□□ -1.39
TOP3A-216ENST00000583804 XP32Q5T750 250 aa6.37□□□□□ -1.39
TOP3A-216ENST00000583804 A0A1W2PNM2 257 aa6.36□□□□□ -1.39
TOP3A-216ENST00000583804 IGLV8-61A0A075B6I0 122 aa6.35□□□□□ -1.39
TOP3A-216ENST00000583804 TRAV7A0A075B6U4 112 aa6.35□□□□□ -1.39
TOP3A-216ENST00000583804 SPAG11AQ6PDA7 123 aa6.34□□□□□ -1.39
TOP3A-216ENST00000583804 TMEM258P61165 79 aa6.34□□□□□ -1.4
TOP3A-216ENST00000583804 NREPQ16612 68 aa6.34□□□□□ -1.4
TOP3A-216ENST00000583804 A0A087WSZ3 146 aa6.32□□□□□ -1.4
TOP3A-216ENST00000583804 SPINK1P00995 79 aa6.32□□□□□ -1.4
TOP3A-216ENST00000583804 IGKV4-1P06312 121 aa6.3□□□□□ -1.4
TOP3A-216ENST00000583804 CYSTM1Q9H1C7 97 aa6.3□□□□□ -1.4
TOP3A-216ENST00000583804 BPY2O14599 106 aa6.29□□□□□ -1.4
TOP3A-216ENST00000583804 RPS28P62857 69 aaKnown RBP6.28□□□□□ -1.4
TOP3A-216ENST00000583804 CD164Q04900 197 aa6.28□□□□□ -1.4
TOP3A-216ENST00000583804 LCE3BQ5TA77 95 aa6.28□□□□□ -1.4
TOP3A-216ENST00000583804 KLKP1Q107X0 134 aa6.28□□□□□ -1.4
TOP3A-216ENST00000583804 J3KT08 172 aa6.26□□□□□ -1.41
TOP3A-216ENST00000583804 DEFB116Q30KQ4 102 aa6.26□□□□□ -1.41
TOP3A-216ENST00000583804 LIMD2Q9BT23 127 aa6.26□□□□□ -1.41
TOP3A-216ENST00000583804 KRTAP4-8A0A0G2JLE6 195 aa6.25□□□□□ -1.41
TOP3A-216ENST00000583804 RPS29P62273 56 aaKnown RBP6.25□□□□□ -1.41
TOP3A-216ENST00000583804 C20orf197Q8N268 126 aa6.25□□□□□ -1.41
TOP3A-216ENST00000583804 RETNLBQ9BQ08 111 aa6.25□□□□□ -1.41
TOP3A-216ENST00000583804 NDUFC1O43677 76 aa6.22□□□□□ -1.41
TOP3A-216ENST00000583804 PRR4Q16378 134 aa6.22□□□□□ -1.41
TOP3A-216ENST00000583804 Q8N9L7 120 aa6.22□□□□□ -1.41
TOP3A-216ENST00000583804 OCR1Q9BZK8 76 aa6.22□□□□□ -1.41
TOP3A-216ENST00000583804 H7BZZ5 65 aa6.21□□□□□ -1.42
TOP3A-216ENST00000583804 DSCR10P59022 87 aa6.21□□□□□ -1.42
TOP3A-216ENST00000583804 Q5XG85 94 aa6.2□□□□□ -1.42
TOP3A-216ENST00000583804 FAM236DA0A1B0GTK5 79 aa6.19□□□□□ -1.42
TOP3A-216ENST00000583804 FAM236CP0DP71 79 aa6.19□□□□□ -1.42
TOP3A-216ENST00000583804 TMEM254Q8TBM7 123 aa6.18□□□□□ -1.42
TOP3A-216ENST00000583804 ATP5EP56381 51 aaPredicted RBP6.17□□□□□ -1.42
TOP3A-216ENST00000583804 C1orf195Q5TG92 126 aa6.17□□□□□ -1.42
TOP3A-216ENST00000583804 Q96NJ1 140 aa6.17□□□□□ -1.42
TOP3A-216ENST00000583804 IGLV7-46A0A075B6I9 117 aa6.16□□□□□ -1.42
TOP3A-216ENST00000583804 A0A0U1RQV1 116 aa6.16□□□□□ -1.42
TOP3A-216ENST00000583804 ASB16-AS1Q495Z4 193 aa6.16□□□□□ -1.42
TOP3A-216ENST00000583804 K7EQZ3 153 aa6.15□□□□□ -1.42
TOP3A-216ENST00000583804 FP248Q71RG6 208 aaPredicted RBP6.15□□□□□ -1.42
TOP3A-216ENST00000583804 LINC00472Q9H8W2 130 aa6.15□□□□□ -1.42
TOP3A-216ENST00000583804 HMCN2Q8NDA2 5059 aa6.15□□□□□ -1.42
TOP3A-216ENST00000583804 SNURFQ9Y675 71 aa6.15□□□□□ -1.43
TOP3A-216ENST00000583804 HCG22E2RYF7 251 aa6.14□□□□□ -1.43
TOP3A-216ENST00000583804 KRTAP9-9Q9BYP9 154 aa6.14□□□□□ -1.43
TOP3A-216ENST00000583804 KRTAP9-4Q9BYQ2 154 aa6.14□□□□□ -1.43
TOP3A-216ENST00000583804 SERP1Q9Y6X1 66 aa6.14□□□□□ -1.43
TOP3A-216ENST00000583804 IGHV6-1A0A0B4J1U7 121 aa6.09□□□□□ -1.43
TOP3A-216ENST00000583804 C5orf47Q569G3 176 aa6.09□□□□□ -1.43
TOP3A-216ENST00000583804 KRTAP4-7Q9BYR0 210 aa6.09□□□□□ -1.43
TOP3A-216ENST00000583804 UBR4Q5T4S7 5183 aa6.09□□□□□ -1.44
TOP3A-216ENST00000583804 A8MWP4 228 aa6.09□□□□□ -1.44
TOP3A-216ENST00000583804 ZCCHC13Q8WW36 166 aaKnown RBP6.09□□□□□ -1.44
TOP3A-216ENST00000583804 PRR15Q8IV56 129 aa6.08□□□□□ -1.44
TOP3A-216ENST00000583804 C9orf92A6NGG3 77 aa6.07□□□□□ -1.44
TOP3A-216ENST00000583804 TPRXLQ17RH7 258 aa6.06□□□□□ -1.44
TOP3A-216ENST00000583804 KRTAP13-3Q3SY46 172 aa6.06□□□□□ -1.44
TOP3A-216ENST00000583804 NOTCH2NLQ7Z3S9 236 aa6.06□□□□□ -1.44
TOP3A-216ENST00000583804 A0A1B0GVX0 72 aa6.05□□□□□ -1.44
TOP3A-216ENST00000583804 NDUFB1O75438 58 aa6.05□□□□□ -1.44
TOP3A-216ENST00000583804 LPAP08519 4548 aa6.04□□□□□ -1.44
TOP3A-216ENST00000583804 WFDC13Q8IUB5 93 aa6.04□□□□□ -1.44
TOP3A-216ENST00000583804 H3BPC8 53 aa6.03□□□□□ -1.44
TOP3A-216ENST00000583804 CASC2Q6XLA1 102 aa6.03□□□□□ -1.44
TOP3A-216ENST00000583804 SMIM26A0A096LP01 95 aa6.02□□□□□ -1.45
TOP3A-216ENST00000583804 C8orf17Q9NRJ1 99 aa6.02□□□□□ -1.45
TOP3A-216ENST00000583804 MMP24-AS1A0A0U1RRL7 71 aa6.01□□□□□ -1.45
TOP3A-216ENST00000583804 MP68P56378 58 aa6.01□□□□□ -1.45
TOP3A-216ENST00000583804 LINC00313P59037 77 aa5.99□□□□□ -1.45
TOP3A-216ENST00000583804 CYP4F30PQ9H0H9 118 aa5.98□□□□□ -1.45
TOP3A-216ENST00000583804 KRTAP4-12Q9BQ66 201 aa5.97□□□□□ -1.45
TOP3A-216ENST00000583804 TRAV22A0A0B4J277 110 aa5.96□□□□□ -1.45
TOP3A-216ENST00000583804 hDV103S1A0JD37 113 aa5.96□□□□□ -1.45
TOP3A-216ENST00000583804 C8orf87E5RJ46 101 aa5.96□□□□□ -1.45
TOP3A-216ENST00000583804 LRP2P98164 4655 aa5.96□□□□□ -1.46
TOP3A-216ENST00000583804 H0Y9P7 68 aa5.96□□□□□ -1.46
TOP3A-216ENST00000583804 TP53AIP1Q9HCN2 124 aa5.96□□□□□ -1.46
TOP3A-216ENST00000583804 NDUFS5O43920 106 aa5.95□□□□□ -1.46
TOP3A-216ENST00000583804 SPANXA2-OT1Q8N9U9 137 aa5.94□□□□□ -1.46
TOP3A-216ENST00000583804 KRTAP16-1A8MUX0 517 aa5.93□□□□□ -1.46
TOP3A-216ENST00000583804 C4orf26Q17RF5 130 aa5.93□□□□□ -1.46
TOP3A-216ENST00000583804 LINC00208Q96KT6 92 aa5.93□□□□□ -1.46
TOP3A-216ENST00000583804 MRPL34Q9BQ48 92 aaKnown RBP5.92□□□□□ -1.46
TOP3A-216ENST00000583804 SEC61BP60468 96 aaKnown RBP5.9□□□□□ -1.47
TOP3A-216ENST00000583804 RPL37P61927 97 aaKnown RBP5.9□□□□□ -1.47
TOP3A-216ENST00000583804 C1orf64Q8NEQ6 169 aa5.89□□□□□ -1.47
TOP3A-216ENST00000583804 Q75L30 129 aa5.88□□□□□ -1.47
TOP3A-216ENST00000583804 C20orf166-AS1Q96NR2 134 aa5.88□□□□□ -1.47
TOP3A-216ENST00000583804 RNF213Q63HN8 5207 aa5.87□□□□□ -1.47
TOP3A-216ENST00000583804 A8MUU9 505 aa5.87□□□□□ -1.47
TOP3A-216ENST00000583804 PCOTHQ58A44 107 aa5.87□□□□□ -1.47
TOP3A-216ENST00000583804 H3BS24 57 aa5.86□□□□□ -1.47
TOP3A-216ENST00000583804 ATP11AUNQ6ZP68 121 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms