RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 KRTAP10-8P60410 259 aa6.13□□□□□ -1.43
SS18-221ENST00000582448 ATP5EP2Q5VTU8 51 aa6.13□□□□□ -1.43
SS18-221ENST00000582448 SMIM29Q86T20 159 aa6.13□□□□□ -1.43
SS18-221ENST00000582448 SPRR4Q96PI1 79 aa6.13□□□□□ -1.43
SS18-221ENST00000582448 IGLV8-61A0A075B6I0 122 aa6.12□□□□□ -1.43
SS18-221ENST00000582448 MT-ATP8P03928 68 aa6.12□□□□□ -1.43
SS18-221ENST00000582448 MT3P25713 68 aa6.11□□□□□ -1.43
SS18-221ENST00000582448 SPINK6Q6UWN8 80 aa6.11□□□□□ -1.43
SS18-221ENST00000582448 Q8NBF4 154 aa6.11□□□□□ -1.43
SS18-221ENST00000582448 SCGB1A1P11684 91 aa6.1□□□□□ -1.43
SS18-221ENST00000582448 NREPQ16612 68 aa6.1□□□□□ -1.43
SS18-221ENST00000582448 LINC00483Q53H64 154 aa6.1□□□□□ -1.43
SS18-221ENST00000582448 C9orf153Q5TBE3 101 aa6.1□□□□□ -1.43
SS18-221ENST00000582448 IMUPQ9GZP8 106 aa6.1□□□□□ -1.43
SS18-221ENST00000582448 KRTAP5-11Q6L8G4 156 aa6.09□□□□□ -1.43
SS18-221ENST00000582448 IGLV9-49A0A0B4J1Y8 123 aa6.08□□□□□ -1.44
SS18-221ENST00000582448 TRBV7-7A0A0K0K1E9 115 aa6.08□□□□□ -1.44
SS18-221ENST00000582448 Q6Q795 121 aa6.08□□□□□ -1.44
SS18-221ENST00000582448 IGFL1Q6UW32 110 aa6.08□□□□□ -1.44
SS18-221ENST00000582448 Q6ZVQ6 151 aa6.08□□□□□ -1.44
SS18-221ENST00000582448 CRYGAP11844 174 aa6.07□□□□□ -1.44
SS18-221ENST00000582448 LPAP08519 4548 aa6.07□□□□□ -1.44
SS18-221ENST00000582448 IGKV3D-7A0A0C4DH55 119 aa6.06□□□□□ -1.44
SS18-221ENST00000582448 A0A1W2PNM2 257 aa6.06□□□□□ -1.44
SS18-221ENST00000582448 CXCL6P80162 114 aa6.05□□□□□ -1.44
SS18-221ENST00000582448 HIST1H4AP62805 103 aaKnown RBP6.04□□□□□ -1.44
SS18-221ENST00000582448 BPY2O14599 106 aa6.03□□□□□ -1.44
SS18-221ENST00000582448 MOBPQ13875 183 aa6.03□□□□□ -1.44
SS18-221ENST00000582448 A0A087WSZ3 146 aa6.02□□□□□ -1.45
SS18-221ENST00000582448 FAM229BQ4G0N7 80 aa6.02□□□□□ -1.45
SS18-221ENST00000582448 SS18L2Q9UHA2 77 aa6.02□□□□□ -1.45
SS18-221ENST00000582448 SSBP3-AS1Q7Z2R9 100 aa6.01□□□□□ -1.45
SS18-221ENST00000582448 ANAPC11Q9NYG5 84 aa6.01□□□□□ -1.45
SS18-221ENST00000582448 A0A0G2JQZ4 141 aa5.99□□□□□ -1.45
SS18-221ENST00000582448 PRR4Q16378 134 aa5.99□□□□□ -1.45
SS18-221ENST00000582448 FAM236AA0A1B0GUQ0 79 aa5.98□□□□□ -1.45
SS18-221ENST00000582448 FAM236BA0A1B0GV22 79 aa5.98□□□□□ -1.45
SS18-221ENST00000582448 CD164Q04900 197 aa5.97□□□□□ -1.45
SS18-221ENST00000582448 LCE1EQ5T753 118 aa5.97□□□□□ -1.45
SS18-221ENST00000582448 A0A0U1RQV1 116 aa5.96□□□□□ -1.46
SS18-221ENST00000582448 J3KT08 172 aa5.96□□□□□ -1.46
SS18-221ENST00000582448 HRCT1Q6UXD1 115 aa5.96□□□□□ -1.46
SS18-221ENST00000582448 ANAPC13Q9BS18 74 aa5.96□□□□□ -1.46
SS18-221ENST00000582448 A0A087WVE0 104 aa5.94□□□□□ -1.46
SS18-221ENST00000582448 ATOX1O00244 68 aa5.94□□□□□ -1.46
SS18-221ENST00000582448 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.94□□□□□ -1.46
SS18-221ENST00000582448 MUC2Q02817 5179 aa5.92□□□□□ -1.46
SS18-221ENST00000582448 NDUFB1O75438 58 aa5.92□□□□□ -1.46
SS18-221ENST00000582448 TYMSOSQ8TAI1 123 aa5.92□□□□□ -1.46
SS18-221ENST00000582448 A0A087X002 238 aa5.91□□□□□ -1.46
SS18-221ENST00000582448 KRTAP1-4P0C5Y4 121 aa5.91□□□□□ -1.46
SS18-221ENST00000582448 SMIM20Q8N5G0 67 aa5.91□□□□□ -1.46
SS18-221ENST00000582448 LIMD2Q9BT23 127 aa5.91□□□□□ -1.46
SS18-221ENST00000582448 IGKV4-1P06312 121 aa5.9□□□□□ -1.46
SS18-221ENST00000582448 DEFB116Q30KQ4 102 aa5.9□□□□□ -1.46
SS18-221ENST00000582448 Q8N9L7 120 aa5.9□□□□□ -1.46
SS18-221ENST00000582448 LINC00472Q9H8W2 130 aa5.9□□□□□ -1.46
SS18-221ENST00000582448 DSCR10P59022 87 aa5.89□□□□□ -1.47
SS18-221ENST00000582448 KRTAP13-2Q52LG2 175 aa5.89□□□□□ -1.47
SS18-221ENST00000582448 A8MWP4 228 aa5.88□□□□□ -1.47
SS18-221ENST00000582448 K7EQZ3 153 aa5.88□□□□□ -1.47
SS18-221ENST00000582448 SPAG11AQ6PDA7 123 aa5.87□□□□□ -1.47
SS18-221ENST00000582448 SPINK1P00995 79 aa5.86□□□□□ -1.47
SS18-221ENST00000582448 HCG22E2RYF7 251 aa5.85□□□□□ -1.47
SS18-221ENST00000582448 ASB16-AS1Q495Z4 193 aa5.85□□□□□ -1.47
SS18-221ENST00000582448 Q5XG85 94 aa5.85□□□□□ -1.47
SS18-221ENST00000582448 PRR15Q8IV56 129 aa5.85□□□□□ -1.47
SS18-221ENST00000582448 SERP2Q8N6R1 65 aa5.85□□□□□ -1.47
SS18-221ENST00000582448 LINC00304Q8N9R0 145 aa5.85□□□□□ -1.47
SS18-221ENST00000582448 TRAV7A0A075B6U4 112 aa5.82□□□□□ -1.48
SS18-221ENST00000582448 RPS29P62273 56 aaKnown RBP5.82□□□□□ -1.48
SS18-221ENST00000582448 Q96NJ1 140 aa5.82□□□□□ -1.48
SS18-221ENST00000582448 A0A1B0GVX0 72 aa5.81□□□□□ -1.48
SS18-221ENST00000582448 UQCRQO14949 82 aa5.81□□□□□ -1.48
SS18-221ENST00000582448 COX7CP15954 63 aa5.81□□□□□ -1.48
SS18-221ENST00000582448 CASC2Q6XLA1 102 aa5.81□□□□□ -1.48
SS18-221ENST00000582448 IGHV6-1A0A0B4J1U7 121 aa5.8□□□□□ -1.48
SS18-221ENST00000582448 WFDC13Q8IUB5 93 aa5.8□□□□□ -1.48
SS18-221ENST00000582448 FAT4Q6V0I7 4981 aa5.78□□□□□ -1.48
SS18-221ENST00000582448 hDV103S1A0JD37 113 aa5.77□□□□□ -1.49
SS18-221ENST00000582448 C8orf87E5RJ46 101 aa5.77□□□□□ -1.49
SS18-221ENST00000582448 C1orf195Q5TG92 126 aa5.77□□□□□ -1.49
SS18-221ENST00000582448 RETNLBQ9BQ08 111 aa5.77□□□□□ -1.49
SS18-221ENST00000582448 C8orf17Q9NRJ1 99 aa5.77□□□□□ -1.49
SS18-221ENST00000582448 MMP24-AS1A0A0U1RRL7 71 aa5.75□□□□□ -1.49
SS18-221ENST00000582448 CCDC179H3BU77 68 aa5.75□□□□□ -1.49
SS18-221ENST00000582448 SEC61BP60468 96 aaKnown RBP5.75□□□□□ -1.49
SS18-221ENST00000582448 OCR1Q9BZK8 76 aa5.74□□□□□ -1.49
SS18-221ENST00000582448 LINC00313P59037 77 aa5.73□□□□□ -1.49
SS18-221ENST00000582448 TMEM254Q8TBM7 123 aa5.73□□□□□ -1.49
SS18-221ENST00000582448 TP53AIP1Q9HCN2 124 aa5.73□□□□□ -1.49
SS18-221ENST00000582448 NDUFS5O43920 106 aa5.72□□□□□ -1.49
SS18-221ENST00000582448 C5orf47Q569G3 176 aa5.72□□□□□ -1.49
SS18-221ENST00000582448 MP68P56378 58 aa5.71□□□□□ -1.5
SS18-221ENST00000582448 C20orf197Q8N268 126 aa5.71□□□□□ -1.5
SS18-221ENST00000582448 MRPL34Q9BQ48 92 aaKnown RBP5.71□□□□□ -1.5
SS18-221ENST00000582448 IGLV7-46A0A075B6I9 117 aa5.7□□□□□ -1.5
SS18-221ENST00000582448 LCE1FQ5T754 118 aa5.68□□□□□ -1.5
SS18-221ENST00000582448 MUC17Q685J3 4493 aa5.68□□□□□ -1.5
SS18-221ENST00000582448 NDUFC1O43677 76 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms