RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 SSBP3-AS1Q7Z2R9 100 aa8.15□□□□□ -1.11
CDK5RAP3-219ENST00000580670 PRR26Q8N8Z3 221 aa8.15□□□□□ -1.11
CDK5RAP3-219ENST00000580670 TYMSOSQ8TAI1 123 aa8.12□□□□□ -1.11
CDK5RAP3-219ENST00000580670 KRTAP4-5Q9BYR2 181 aa8.1□□□□□ -1.11
CDK5RAP3-219ENST00000580670 PRO0628Q9UI54 55 aa8.1□□□□□ -1.11
CDK5RAP3-219ENST00000580670 Q8N9L7 120 aa8.09□□□□□ -1.11
CDK5RAP3-219ENST00000580670 FLG2Q5D862 2391 aaPredicted RBP8.07□□□□□ -1.12
CDK5RAP3-219ENST00000580670 A0A087WSZ3 146 aa8.06□□□□□ -1.12
CDK5RAP3-219ENST00000580670 CD164Q04900 197 aa8.06□□□□□ -1.12
CDK5RAP3-219ENST00000580670 HERC2O95714 4834 aa8.04□□□□□ -1.12
CDK5RAP3-219ENST00000580670 C4orf48Q5BLP8 95 aa8.04□□□□□ -1.12
CDK5RAP3-219ENST00000580670 LINC00304Q8N9R0 145 aa8.03□□□□□ -1.12
CDK5RAP3-219ENST00000580670 KRTAP10-8P60410 259 aa8.01□□□□□ -1.13
CDK5RAP3-219ENST00000580670 LRP1Q07954 4544 aaKnown RBP8□□□□□ -1.13
CDK5RAP3-219ENST00000580670 SPAG11AQ6PDA7 123 aa7.99□□□□□ -1.13
CDK5RAP3-219ENST00000580670 ZCCHC13Q8WW36 166 aaKnown RBP7.99□□□□□ -1.13
CDK5RAP3-219ENST00000580670 FAT3Q8TDW7 4589 aa7.99□□□□□ -1.13
CDK5RAP3-219ENST00000580670 SPINK1P00995 79 aa7.99□□□□□ -1.13
CDK5RAP3-219ENST00000580670 DSCR10P59022 87 aa7.98□□□□□ -1.13
CDK5RAP3-219ENST00000580670 MYCBP2O75592 4640 aa7.96□□□□□ -1.14
CDK5RAP3-219ENST00000580670 LIMD2Q9BT23 127 aa7.96□□□□□ -1.14
CDK5RAP3-219ENST00000580670 TNXBP22105 4242 aa7.96□□□□□ -1.14
CDK5RAP3-219ENST00000580670 hDV103S1A0JD37 113 aa7.95□□□□□ -1.14
CDK5RAP3-219ENST00000580670 MT1HL1P0DM35 61 aa7.95□□□□□ -1.14
CDK5RAP3-219ENST00000580670 RPS29P62273 56 aaKnown RBP7.94□□□□□ -1.14
CDK5RAP3-219ENST00000580670 ABCA13Q86UQ4 5058 aa7.93□□□□□ -1.14
CDK5RAP3-219ENST00000580670 DEFB116Q30KQ4 102 aa7.92□□□□□ -1.14
CDK5RAP3-219ENST00000580670 LINC00472Q9H8W2 130 aa7.92□□□□□ -1.14
CDK5RAP3-219ENST00000580670 KRTAP29-1A8MX34 341 aaPredicted RBP7.92□□□□□ -1.14
CDK5RAP3-219ENST00000580670 ASB16-AS1Q495Z4 193 aa7.92□□□□□ -1.14
CDK5RAP3-219ENST00000580670 K7EQZ3 153 aa7.91□□□□□ -1.14
CDK5RAP3-219ENST00000580670 Q96NJ1 140 aa7.91□□□□□ -1.14
CDK5RAP3-219ENST00000580670 CYP4F30PQ9H0H9 118 aa7.91□□□□□ -1.14
CDK5RAP3-219ENST00000580670 HCG22E2RYF7 251 aa7.9□□□□□ -1.14
CDK5RAP3-219ENST00000580670 MPLKIPQ8TAP9 179 aa7.9□□□□□ -1.14
CDK5RAP3-219ENST00000580670 Q1T7F1 81 aa7.89□□□□□ -1.15
CDK5RAP3-219ENST00000580670 C1orf195Q5TG92 126 aa7.87□□□□□ -1.15
CDK5RAP3-219ENST00000580670 C1orf64Q8NEQ6 169 aa7.87□□□□□ -1.15
CDK5RAP3-219ENST00000580670 BRK1Q8WUW1 75 aa7.87□□□□□ -1.15
CDK5RAP3-219ENST00000580670 DMBT1Q9UGM3 2413 aaPredicted RBP7.87□□□□□ -1.15
CDK5RAP3-219ENST00000580670 NDUFB1O75438 58 aa7.86□□□□□ -1.15
CDK5RAP3-219ENST00000580670 J3QL48 77 aa7.84□□□□□ -1.15
CDK5RAP3-219ENST00000580670 A8MWP4 228 aa7.82□□□□□ -1.16
CDK5RAP3-219ENST00000580670 RETNLBQ9BQ08 111 aa7.82□□□□□ -1.16
CDK5RAP3-219ENST00000580670 H3BPC8 53 aa7.81□□□□□ -1.16
CDK5RAP3-219ENST00000580670 TRAV22A0A0B4J277 110 aa7.79□□□□□ -1.16
CDK5RAP3-219ENST00000580670 MP68P56378 58 aa7.79□□□□□ -1.16
CDK5RAP3-219ENST00000580670 PRR15Q8IV56 129 aa7.79□□□□□ -1.16
CDK5RAP3-219ENST00000580670 SPANXA2-OT1Q8N9U9 137 aa7.78□□□□□ -1.16
CDK5RAP3-219ENST00000580670 V9GYY9 64 aa7.77□□□□□ -1.17
CDK5RAP3-219ENST00000580670 IGHV6-1A0A0B4J1U7 121 aa7.76□□□□□ -1.17
CDK5RAP3-219ENST00000580670 A0A1B0GVX0 72 aa7.76□□□□□ -1.17
CDK5RAP3-219ENST00000580670 WFDC13Q8IUB5 93 aa7.75□□□□□ -1.17
CDK5RAP3-219ENST00000580670 CASC2Q6XLA1 102 aa7.73□□□□□ -1.17
CDK5RAP3-219ENST00000580670 PCLOQ9Y6V0 5065 aa7.73□□□□□ -1.17
CDK5RAP3-219ENST00000580670 LINC00208Q96KT6 92 aa7.72□□□□□ -1.17
CDK5RAP3-219ENST00000580670 H0Y9P7 68 aa7.71□□□□□ -1.18
CDK5RAP3-219ENST00000580670 C8orf17Q9NRJ1 99 aa7.71□□□□□ -1.18
CDK5RAP3-219ENST00000580670 NOTCH2NLQ7Z3S9 236 aa7.7□□□□□ -1.18
CDK5RAP3-219ENST00000580670 MMP24-AS1A0A0U1RRL7 71 aa7.69□□□□□ -1.18
CDK5RAP3-219ENST00000580670 PRR4Q16378 134 aa7.69□□□□□ -1.18
CDK5RAP3-219ENST00000580670 C8orf87E5RJ46 101 aa7.69□□□□□ -1.18
CDK5RAP3-219ENST00000580670 LINC00313P59037 77 aa7.68□□□□□ -1.18
CDK5RAP3-219ENST00000580670 IGLV7-46A0A075B6I9 117 aa7.67□□□□□ -1.18
CDK5RAP3-219ENST00000580670 PSPHP1O15172 72 aa7.66□□□□□ -1.18
CDK5RAP3-219ENST00000580670 C9orf92A6NGG3 77 aa7.65□□□□□ -1.18
CDK5RAP3-219ENST00000580670 Q8N9P0 234 aaPredicted RBP7.65□□□□□ -1.18
CDK5RAP3-219ENST00000580670 A8MUN3 132 aa7.64□□□□□ -1.19
CDK5RAP3-219ENST00000580670 Q5VV11 94 aa7.64□□□□□ -1.19
CDK5RAP3-219ENST00000580670 KRTAP16-1A8MUX0 517 aa7.6□□□□□ -1.19
CDK5RAP3-219ENST00000580670 PMAIP1Q13794 54 aa7.6□□□□□ -1.19
CDK5RAP3-219ENST00000580670 MRPL34Q9BQ48 92 aaKnown RBP7.6□□□□□ -1.19
CDK5RAP3-219ENST00000580670 TP53AIP1Q9HCN2 124 aa7.6□□□□□ -1.19
CDK5RAP3-219ENST00000580670 KRTAP13-3Q3SY46 172 aa7.59□□□□□ -1.2
CDK5RAP3-219ENST00000580670 LOC101927531A0A1B0GV80 90 aa7.58□□□□□ -1.2
CDK5RAP3-219ENST00000580670 NDUFS5O43920 106 aa7.56□□□□□ -1.2
CDK5RAP3-219ENST00000580670 TPRXLQ17RH7 258 aa7.55□□□□□ -1.2
CDK5RAP3-219ENST00000580670 Q75L30 129 aa7.55□□□□□ -1.2
CDK5RAP3-219ENST00000580670 COA5Q86WW8 74 aa7.55□□□□□ -1.2
CDK5RAP3-219ENST00000580670 SEC61GP60059 68 aa7.54□□□□□ -1.2
CDK5RAP3-219ENST00000580670 CHKB-CPT1BH3BT56 60 aa7.53□□□□□ -1.2
CDK5RAP3-219ENST00000580670 PRR15LQ9BU68 103 aa7.52□□□□□ -1.21
CDK5RAP3-219ENST00000580670 C20orf166-AS1Q96NR2 134 aa7.51□□□□□ -1.21
CDK5RAP3-219ENST00000580670 XP32Q5T750 250 aa7.51□□□□□ -1.21
CDK5RAP3-219ENST00000580670 A8MUU9 505 aa7.5□□□□□ -1.21
CDK5RAP3-219ENST00000580670 HERC1Q15751 4861 aa7.5□□□□□ -1.21
CDK5RAP3-219ENST00000580670 LINC01558Q9Y6Z2 57 aa7.49□□□□□ -1.21
CDK5RAP3-219ENST00000580670 A8MU10 97 aa7.48□□□□□ -1.21
CDK5RAP3-219ENST00000580670 ATP11AUNQ6ZP68 121 aa7.48□□□□□ -1.21
CDK5RAP3-219ENST00000580670 LCA10Q71F78 164 aa7.46□□□□□ -1.21
CDK5RAP3-219ENST00000580670 PCOTHQ58A44 107 aa7.45□□□□□ -1.22
CDK5RAP3-219ENST00000580670 RPL37P61927 97 aaKnown RBP7.43□□□□□ -1.22
CDK5RAP3-219ENST00000580670 LPAP08519 4548 aa7.43□□□□□ -1.22
CDK5RAP3-219ENST00000580670 CDC42SE1Q9NRR8 79 aa7.43□□□□□ -1.22
CDK5RAP3-219ENST00000580670 Q5W150 140 aa7.42□□□□□ -1.22
CDK5RAP3-219ENST00000580670 A6NED7 52 aa7.41□□□□□ -1.22
CDK5RAP3-219ENST00000580670 HRES1P13985 223 aa7.41□□□□□ -1.22
CDK5RAP3-219ENST00000580670 KTN1-AS1Q86SY8 53 aa7.39□□□□□ -1.23
CDK5RAP3-219ENST00000580670 HMCN2Q8NDA2 5059 aa7.38□□□□□ -1.23
CDK5RAP3-219ENST00000580670 A6NN06 94 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms