RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 SNHG12Q9BXW3 62 aa2.86□□□□□ -1.95
PPP4R1-216ENST00000580283 SEC11CQ9BY50 192 aa2.86□□□□□ -1.95
PPP4R1-216ENST00000580283 TSTD3H0UI37 97 aa2.85□□□□□ -1.95
PPP4R1-216ENST00000580283 LST1O00453 97 aa2.85□□□□□ -1.95
PPP4R1-216ENST00000580283 HIST3H2BBQ8N257 126 aa2.85□□□□□ -1.95
PPP4R1-216ENST00000580283 SPANXDQ9BXN6 97 aa2.85□□□□□ -1.95
PPP4R1-216ENST00000580283 SPANXCQ9NY87 97 aa2.85□□□□□ -1.95
PPP4R1-216ENST00000580283 HSBP1L1C9JCN9 74 aa2.84□□□□□ -1.95
PPP4R1-216ENST00000580283 S100A2P29034 98 aa2.84□□□□□ -1.95
PPP4R1-216ENST00000580283 NMUP48645 174 aa2.84□□□□□ -1.95
PPP4R1-216ENST00000580283 M0R143 59 aa2.83□□□□□ -1.96
PPP4R1-216ENST00000580283 CLEC2BQ92478 149 aa2.83□□□□□ -1.96
PPP4R1-216ENST00000580283 SPRR2FQ96RM1 72 aa2.83□□□□□ -1.96
PPP4R1-216ENST00000580283 COX19Q49B96 90 aa2.82□□□□□ -1.96
PPP4R1-216ENST00000580283 OCIAD2Q56VL3 154 aa2.82□□□□□ -1.96
PPP4R1-216ENST00000580283 Q6JHZ5 121 aa2.82□□□□□ -1.96
PPP4R1-216ENST00000580283 HIST1H2BKO60814 126 aa2.81□□□□□ -1.96
PPP4R1-216ENST00000580283 HIST1H2BJP06899 126 aa2.81□□□□□ -1.96
PPP4R1-216ENST00000580283 HIST1H2BOP23527 126 aa2.81□□□□□ -1.96
PPP4R1-216ENST00000580283 HIST1H2BBP33778 126 aa2.81□□□□□ -1.96
PPP4R1-216ENST00000580283 HIST1H2BDP58876 126 aa2.81□□□□□ -1.96
PPP4R1-216ENST00000580283 HIST1H2BCP62807 126 aa2.81□□□□□ -1.96
PPP4R1-216ENST00000580283 HIST2H2BEQ16778 126 aa2.81□□□□□ -1.96
PPP4R1-216ENST00000580283 KRTAP19-8Q3LI54 63 aa2.81□□□□□ -1.96
PPP4R1-216ENST00000580283 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.81□□□□□ -1.96
PPP4R1-216ENST00000580283 HIST1H2BHQ93079 126 aa2.81□□□□□ -1.96
PPP4R1-216ENST00000580283 HIST1H2BNQ99877 126 aa2.81□□□□□ -1.96
PPP4R1-216ENST00000580283 HIST1H2BMQ99879 126 aa2.81□□□□□ -1.96
PPP4R1-216ENST00000580283 HIST1H2BLQ99880 126 aa2.81□□□□□ -1.96
PPP4R1-216ENST00000580283 PMCHL2Q9BQD1 86 aa2.81□□□□□ -1.96
PPP4R1-216ENST00000580283 HSBP1O75506 76 aa2.8□□□□□ -1.96
PPP4R1-216ENST00000580283 FABP4P15090 132 aa2.8□□□□□ -1.96
PPP4R1-216ENST00000580283 TRAPPC1Q9Y5R8 145 aa2.8□□□□□ -1.96
PPP4R1-216ENST00000580283 SPINK7P58062 85 aa2.79□□□□□ -1.96
PPP4R1-216ENST00000580283 LINC00313P59037 77 aa2.79□□□□□ -1.96
PPP4R1-216ENST00000580283 DEFB116Q30KQ4 102 aa2.79□□□□□ -1.96
PPP4R1-216ENST00000580283 CAMK2N1Q7Z7J9 78 aa2.79□□□□□ -1.96
PPP4R1-216ENST00000580283 F8WEM9 126 aa2.78□□□□□ -1.96
PPP4R1-216ENST00000580283 H3BUT2 72 aa2.78□□□□□ -1.96
PPP4R1-216ENST00000580283 TIMM17BO60830 172 aa2.78□□□□□ -1.96
PPP4R1-216ENST00000580283 COA6Q5JTJ3 125 aaKnown RBP2.78□□□□□ -1.96
PPP4R1-216ENST00000580283 Q5VV11 94 aa2.78□□□□□ -1.96
PPP4R1-216ENST00000580283 CHCHD1Q96BP2 118 aaKnown RBP2.78□□□□□ -1.96
PPP4R1-216ENST00000580283 TRAV13-2A0A0B4J235 113 aa2.77□□□□□ -1.97
PPP4R1-216ENST00000580283 A0A1W2PNM2 257 aa2.77□□□□□ -1.97
PPP4R1-216ENST00000580283 DPM2O94777 84 aa2.77□□□□□ -1.97
PPP4R1-216ENST00000580283 TRGC2P03986 189 aa2.77□□□□□ -1.97
PPP4R1-216ENST00000580283 SPRR2DP22532 72 aa2.77□□□□□ -1.97
PPP4R1-216ENST00000580283 PLNP26678 52 aa2.77□□□□□ -1.97
PPP4R1-216ENST00000580283 LINC00575Q6W349 94 aa2.77□□□□□ -1.97
PPP4R1-216ENST00000580283 Q6ZQY7 126 aa2.77□□□□□ -1.97
PPP4R1-216ENST00000580283 SMIM11BQ8TCY0 68 aa2.77□□□□□ -1.97
PPP4R1-216ENST00000580283 TTTY13Q9BZ97 58 aa2.77□□□□□ -1.97
PPP4R1-216ENST00000580283 IGKCP01834 107 aa2.76□□□□□ -1.97
PPP4R1-216ENST00000580283 COL5A1-AS1Q5SY13 56 aa2.76□□□□□ -1.97
PPP4R1-216ENST00000580283 SPRR2GQ9BYE4 73 aa2.76□□□□□ -1.97
PPP4R1-216ENST00000580283 DSTQ03001 7570 aaKnown RBP2.75□□□□□ -1.97
PPP4R1-216ENST00000580283 A0A087WSZ3 146 aa2.74□□□□□ -1.97
PPP4R1-216ENST00000580283 A6NDN8 102 aa2.74□□□□□ -1.97
PPP4R1-216ENST00000580283 ZNF815PA8K554 130 aa2.74□□□□□ -1.97
PPP4R1-216ENST00000580283 VAMP3Q15836 100 aa2.74□□□□□ -1.97
PPP4R1-216ENST00000580283 VPS25Q9BRG1 176 aa2.74□□□□□ -1.97
PPP4R1-216ENST00000580283 NHP2Q9NX24 153 aaKnown RBP2.74□□□□□ -1.97
PPP4R1-216ENST00000580283 SS18L2Q9UHA2 77 aa2.74□□□□□ -1.97
PPP4R1-216ENST00000580283 hADV29S1A0JD25 119 aa2.73□□□□□ -1.97
PPP4R1-216ENST00000580283 LEPROTL1O95214 131 aa2.73□□□□□ -1.97
PPP4R1-216ENST00000580283 BATFQ16520 125 aa2.73□□□□□ -1.97
PPP4R1-216ENST00000580283 C5orf47Q569G3 176 aa2.73□□□□□ -1.97
PPP4R1-216ENST00000580283 TEN1Q86WV5 123 aa2.73□□□□□ -1.97
PPP4R1-216ENST00000580283 WFDC13Q8IUB5 93 aa2.73□□□□□ -1.97
PPP4R1-216ENST00000580283 ZCCHC13Q8WW36 166 aaKnown RBP2.73□□□□□ -1.97
PPP4R1-216ENST00000580283 SIGMAR1Q99720 223 aa2.72□□□□□ -1.97
PPP4R1-216ENST00000580283 HSPB8Q9UJY1 196 aa2.72□□□□□ -1.97
PPP4R1-216ENST00000580283 IGKV4-1P06312 121 aa2.71□□□□□ -1.98
PPP4R1-216ENST00000580283 SCGB1A1P11684 91 aa2.71□□□□□ -1.98
PPP4R1-216ENST00000580283 H1FX-AS1Q4G0G2 97 aa2.71□□□□□ -1.98
PPP4R1-216ENST00000580283 MUSTN1Q8IVN3 82 aa2.71□□□□□ -1.98
PPP4R1-216ENST00000580283 V9GYY9 64 aa2.7□□□□□ -1.98
PPP4R1-216ENST00000580283 IGHV6-1A0A0B4J1U7 121 aa2.69□□□□□ -1.98
PPP4R1-216ENST00000580283 K7ERU9 68 aa2.69□□□□□ -1.98
PPP4R1-216ENST00000580283 TAX1BP3O14907 124 aa2.69□□□□□ -1.98
PPP4R1-216ENST00000580283 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.69□□□□□ -1.98
PPP4R1-216ENST00000580283 KRTAP8-1Q8IUC2 63 aa2.69□□□□□ -1.98
PPP4R1-216ENST00000580283 VAMP8Q9BV40 100 aa2.69□□□□□ -1.98
PPP4R1-216ENST00000580283 LINC00472Q9H8W2 130 aa2.69□□□□□ -1.98
PPP4R1-216ENST00000580283 UQCR10Q9UDW1 63 aa2.69□□□□□ -1.98
PPP4R1-216ENST00000580283 IFITM1P13164 125 aa2.68□□□□□ -1.98
PPP4R1-216ENST00000580283 SPATA45Q537H7 98 aa2.68□□□□□ -1.98
PPP4R1-216ENST00000580283 PPDPFLQ8WWR9 84 aa2.68□□□□□ -1.98
PPP4R1-216ENST00000580283 A0A1B0GV72 72 aa2.67□□□□□ -1.98
PPP4R1-216ENST00000580283 BVES-AS1Q5T3Y7 98 aa2.65□□□□□ -1.99
PPP4R1-216ENST00000580283 LINC01545Q5VT33 79 aa2.65□□□□□ -1.99
PPP4R1-216ENST00000580283 HMCN1Q96RW7 5635 aa2.64□□□□□ -1.99
PPP4R1-216ENST00000580283 AHNAK2Q8IVF2 5795 aa2.64□□□□□ -1.99
PPP4R1-216ENST00000580283 FAM236AA0A1B0GUQ0 79 aa2.64□□□□□ -1.99
PPP4R1-216ENST00000580283 FAM236BA0A1B0GV22 79 aa2.64□□□□□ -1.99
PPP4R1-216ENST00000580283 A0A1B0GVX0 72 aa2.64□□□□□ -1.99
PPP4R1-216ENST00000580283 SYS1-DBNDD2H3BUS1 97 aa2.64□□□□□ -1.99
PPP4R1-216ENST00000580283 KRTDAPP60985 99 aa2.64□□□□□ -1.99
PPP4R1-216ENST00000580283 H3BMG7 143 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 167.6 ms