RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 IGHV6-1A0A0B4J1U7 121 aa10.59□□□□□ -0.71
SMPD3-211ENST00000568373 SERP1Q9Y6X1 66 aa10.59□□□□□ -0.71
SMPD3-211ENST00000568373 A0A1B0GVY2 172 aa10.57□□□□□ -0.72
SMPD3-211ENST00000568373 ATP5EP56381 51 aaPredicted RBP10.57□□□□□ -0.72
SMPD3-211ENST00000568373 MP68P56378 58 aa10.57□□□□□ -0.72
SMPD3-211ENST00000568373 SPINK6Q6UWN8 80 aa10.55□□□□□ -0.72
SMPD3-211ENST00000568373 H0Y9P7 68 aa10.53□□□□□ -0.72
SMPD3-211ENST00000568373 H3BPC8 53 aa10.5□□□□□ -0.73
SMPD3-211ENST00000568373 PLA2G1BP04054 148 aaKnown RBP10.5□□□□□ -0.73
SMPD3-211ENST00000568373 NOTCH2NLQ7Z3S9 236 aa10.5□□□□□ -0.73
SMPD3-211ENST00000568373 LINC00208Q96KT6 92 aa10.5□□□□□ -0.73
SMPD3-211ENST00000568373 TP53AIP1Q9HCN2 124 aa10.49□□□□□ -0.73
SMPD3-211ENST00000568373 EPPK1P58107 5090 aaKnown RBP10.49□□□□□ -0.73
SMPD3-211ENST00000568373 APOBP04114 4563 aaKnown RBP10.49□□□□□ -0.73
SMPD3-211ENST00000568373 MRPL34Q9BQ48 92 aaKnown RBP10.48□□□□□ -0.73
SMPD3-211ENST00000568373 TRAV22A0A0B4J277 110 aa10.48□□□□□ -0.73
SMPD3-211ENST00000568373 SMR3BP02814 79 aaPredicted RBP10.45□□□□□ -0.74
SMPD3-211ENST00000568373 C1orf195Q5TG92 126 aa10.44□□□□□ -0.74
SMPD3-211ENST00000568373 TYMSOSQ8TAI1 123 aa10.44□□□□□ -0.74
SMPD3-211ENST00000568373 SMIM26A0A096LP01 95 aa10.43□□□□□ -0.74
SMPD3-211ENST00000568373 NDUFS5O43920 106 aa10.43□□□□□ -0.74
SMPD3-211ENST00000568373 C1orf64Q8NEQ6 169 aa10.43□□□□□ -0.74
SMPD3-211ENST00000568373 LIMD2Q9BT23 127 aa10.43□□□□□ -0.74
SMPD3-211ENST00000568373 FAT1Q14517 4588 aa10.42□□□□□ -0.74
SMPD3-211ENST00000568373 C8orf87E5RJ46 101 aa10.41□□□□□ -0.74
SMPD3-211ENST00000568373 C4orf48Q5BLP8 95 aa10.4□□□□□ -0.75
SMPD3-211ENST00000568373 PRO0628Q9UI54 55 aa10.38□□□□□ -0.75
SMPD3-211ENST00000568373 FP248Q71RG6 208 aaPredicted RBP10.38□□□□□ -0.75
SMPD3-211ENST00000568373 SPINK1P00995 79 aa10.37□□□□□ -0.75
SMPD3-211ENST00000568373 PRR26Q8N8Z3 221 aa10.36□□□□□ -0.75
SMPD3-211ENST00000568373 KRTAP10-4P60372 401 aaPredicted RBP10.35□□□□□ -0.75
SMPD3-211ENST00000568373 LINC00313P59037 77 aa10.35□□□□□ -0.75
SMPD3-211ENST00000568373 CYP4F30PQ9H0H9 118 aa10.34□□□□□ -0.75
SMPD3-211ENST00000568373 SPANXA2-OT1Q8N9U9 137 aa10.32□□□□□ -0.76
SMPD3-211ENST00000568373 PRR4Q16378 134 aa10.31□□□□□ -0.76
SMPD3-211ENST00000568373 LINC00304Q8N9R0 145 aa10.31□□□□□ -0.76
SMPD3-211ENST00000568373 RPS29P62273 56 aaKnown RBP10.29□□□□□ -0.76
SMPD3-211ENST00000568373 SPAG11AQ6PDA7 123 aa10.28□□□□□ -0.76
SMPD3-211ENST00000568373 PKHD1L1Q86WI1 4243 aa10.27□□□□□ -0.77
SMPD3-211ENST00000568373 KIAA1109Q2LD37 5005 aa10.26□□□□□ -0.77
SMPD3-211ENST00000568373 KRTAP13-3Q3SY46 172 aa10.26□□□□□ -0.77
SMPD3-211ENST00000568373 Q5W150 140 aa10.26□□□□□ -0.77
SMPD3-211ENST00000568373 Q8N9P0 234 aaPredicted RBP10.26□□□□□ -0.77
SMPD3-211ENST00000568373 KRTAP16-1A8MUX0 517 aa10.24□□□□□ -0.77
SMPD3-211ENST00000568373 PCOTHQ58A44 107 aa10.24□□□□□ -0.77
SMPD3-211ENST00000568373 HSPG2P98160 4391 aa10.23□□□□□ -0.77
SMPD3-211ENST00000568373 LOC101927531A0A1B0GV80 90 aa10.21□□□□□ -0.77
SMPD3-211ENST00000568373 IGLV7-46A0A075B6I9 117 aa10.21□□□□□ -0.78
SMPD3-211ENST00000568373 RYR1P21817 5038 aa10.19□□□□□ -0.78
SMPD3-211ENST00000568373 FAM229AH3BQW9 127 aa10.18□□□□□ -0.78
SMPD3-211ENST00000568373 KRTAP17-1Q9BYP8 105 aa10.16□□□□□ -0.78
SMPD3-211ENST00000568373 BRK1Q8WUW1 75 aa10.13□□□□□ -0.79
SMPD3-211ENST00000568373 MPLKIPQ8TAP9 179 aa10.12□□□□□ -0.79
SMPD3-211ENST00000568373 RETNLBQ9BQ08 111 aa10.1□□□□□ -0.79
SMPD3-211ENST00000568373 BIRC6Q9NR09 4857 aa10.06□□□□□ -0.8
SMPD3-211ENST00000568373 IGKV2-30P06310 120 aa10.05□□□□□ -0.8
SMPD3-211ENST00000568373 Q5VSD8 79 aa10.05□□□□□ -0.8
SMPD3-211ENST00000568373 COA5Q86WW8 74 aa10.05□□□□□ -0.8
SMPD3-211ENST00000568373 Q1T7F1 81 aa10.02□□□□□ -0.81
SMPD3-211ENST00000568373 TNXBP22105 4242 aa10.01□□□□□ -0.81
SMPD3-211ENST00000568373 LRP1Q07954 4544 aaKnown RBP10□□□□□ -0.81
SMPD3-211ENST00000568373 FLG2Q5D862 2391 aaPredicted RBP9.99□□□□□ -0.81
SMPD3-211ENST00000568373 HRES1P13985 223 aa9.99□□□□□ -0.81
SMPD3-211ENST00000568373 C9orf92A6NGG3 77 aa9.95□□□□□ -0.82
SMPD3-211ENST00000568373 KRTAP10-8P60410 259 aa9.95□□□□□ -0.82
SMPD3-211ENST00000568373 Q8N1X5 172 aa9.95□□□□□ -0.82
SMPD3-211ENST00000568373 IGKV2D-30A0A075B6S6 120 aa9.95□□□□□ -0.82
SMPD3-211ENST00000568373 V9GYY9 64 aa9.93□□□□□ -0.82
SMPD3-211ENST00000568373 KRTAP4-5Q9BYR2 181 aa9.92□□□□□ -0.82
SMPD3-211ENST00000568373 C20orf166-AS1Q96NR2 134 aa9.92□□□□□ -0.82
SMPD3-211ENST00000568373 FAT3Q8TDW7 4589 aa9.91□□□□□ -0.82
SMPD3-211ENST00000568373 A8MUU9 505 aa9.91□□□□□ -0.82
SMPD3-211ENST00000568373 DMAC1Q96GE9 116 aa9.91□□□□□ -0.82
SMPD3-211ENST00000568373 ACYP2P14621 99 aa9.89□□□□□ -0.83
SMPD3-211ENST00000568373 HERC2O95714 4834 aa9.88□□□□□ -0.83
SMPD3-211ENST00000568373 MYCBP2O75592 4640 aa9.87□□□□□ -0.83
SMPD3-211ENST00000568373 PSPHP1O15172 72 aa9.86□□□□□ -0.83
SMPD3-211ENST00000568373 C7orf65Q6ZTY9 151 aa9.86□□□□□ -0.83
SMPD3-211ENST00000568373 ABCA13Q86UQ4 5058 aa9.84□□□□□ -0.83
SMPD3-211ENST00000568373 A8MUN3 132 aa9.81□□□□□ -0.84
SMPD3-211ENST00000568373 DMBT1Q9UGM3 2413 aaPredicted RBP9.8□□□□□ -0.84
SMPD3-211ENST00000568373 Q75L30 129 aa9.77□□□□□ -0.85
SMPD3-211ENST00000568373 CHKB-CPT1BH3BT56 60 aa9.75□□□□□ -0.85
SMPD3-211ENST00000568373 PMAIP1Q13794 54 aa9.75□□□□□ -0.85
SMPD3-211ENST00000568373 Q5VV11 94 aa9.75□□□□□ -0.85
SMPD3-211ENST00000568373 PRR15LQ9BU68 103 aa9.75□□□□□ -0.85
SMPD3-211ENST00000568373 LINC01558Q9Y6Z2 57 aa9.75□□□□□ -0.85
SMPD3-211ENST00000568373 SEC61GP60059 68 aa9.74□□□□□ -0.85
SMPD3-211ENST00000568373 MT1HL1P0DM35 61 aa9.73□□□□□ -0.85
SMPD3-211ENST00000568373 PCLOQ9Y6V0 5065 aa9.69□□□□□ -0.86
SMPD3-211ENST00000568373 SPINK7P58062 85 aa9.67□□□□□ -0.86
SMPD3-211ENST00000568373 ATP11AUNQ6ZP68 121 aa9.6□□□□□ -0.87
SMPD3-211ENST00000568373 RPL37P61927 97 aaKnown RBP9.59□□□□□ -0.87
SMPD3-211ENST00000568373 XP32Q5T750 250 aa9.59□□□□□ -0.87
SMPD3-211ENST00000568373 A8MU10 97 aa9.57□□□□□ -0.88
SMPD3-211ENST00000568373 KRTAP3-1Q9BYR8 98 aa9.54□□□□□ -0.88
SMPD3-211ENST00000568373 A6NED7 52 aa9.53□□□□□ -0.88
SMPD3-211ENST00000568373 LCA10Q71F78 164 aa9.49□□□□□ -0.89
SMPD3-211ENST00000568373 A0A1B0GU69 56 aa9.48□□□□□ -0.89
SMPD3-211ENST00000568373 KTN1-AS1Q86SY8 53 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms