RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 KRTAP1-5Q9BYS1 174 aa3.69□□□□□ -1.82
CNOT1-211ENST00000567188 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.69□□□□□ -1.82
CNOT1-211ENST00000567188 RPL37P61927 97 aaKnown RBP3.68□□□□□ -1.82
CNOT1-211ENST00000567188 KRTAP29-1A8MX34 341 aaPredicted RBP3.68□□□□□ -1.82
CNOT1-211ENST00000567188 CSMD3Q7Z407 3707 aa3.68□□□□□ -1.82
CNOT1-211ENST00000567188 HRNRQ86YZ3 2850 aaPredicted RBP3.68□□□□□ -1.82
CNOT1-211ENST00000567188 DCHS2Q6V1P9 2916 aa3.68□□□□□ -1.82
CNOT1-211ENST00000567188 SPRR1AP35321 89 aa3.68□□□□□ -1.82
CNOT1-211ENST00000567188 DSPP15924 2871 aaKnown RBP3.68□□□□□ -1.82
CNOT1-211ENST00000567188 LINC00472Q9H8W2 130 aa3.67□□□□□ -1.82
CNOT1-211ENST00000567188 CENPEQ02224 2701 aa3.67□□□□□ -1.82
CNOT1-211ENST00000567188 DNAH9Q9NYC9 4486 aa3.67□□□□□ -1.82
CNOT1-211ENST00000567188 PRKDCP78527 4128 aaKnown RBP3.67□□□□□ -1.82
CNOT1-211ENST00000567188 MAST4O15021 2626 aa3.65□□□□□ -1.82
CNOT1-211ENST00000567188 Q8N1X5 172 aa3.63□□□□□ -1.83
CNOT1-211ENST00000567188 CHD6Q8TD26 2715 aa3.63□□□□□ -1.83
CNOT1-211ENST00000567188 NDUFAF8A1L188 74 aa3.63□□□□□ -1.83
CNOT1-211ENST00000567188 CRYBG3Q68DQ2 2970 aa3.63□□□□□ -1.83
CNOT1-211ENST00000567188 KRTAP10-1P60331 282 aa3.63□□□□□ -1.83
CNOT1-211ENST00000567188 GCN1Q92616 2671 aaKnown RBP3.63□□□□□ -1.83
CNOT1-211ENST00000567188 Q5W150 140 aa3.62□□□□□ -1.83
CNOT1-211ENST00000567188 FRAS1Q86XX4 4008 aa3.62□□□□□ -1.83
CNOT1-211ENST00000567188 C20orf166-AS1Q96NR2 134 aa3.61□□□□□ -1.83
CNOT1-211ENST00000567188 ASH1LQ9NR48 2969 aaKnown RBP3.61□□□□□ -1.83
CNOT1-211ENST00000567188 DYNC2H1Q8NCM8 4307 aaKnown RBP3.61□□□□□ -1.83
CNOT1-211ENST00000567188 NBEAL1Q6ZS30 2694 aa3.6□□□□□ -1.83
CNOT1-211ENST00000567188 MGAM2Q2M2H8 2515 aa3.59□□□□□ -1.83
CNOT1-211ENST00000567188 PANO1I0J062 215 aa3.59□□□□□ -1.83
CNOT1-211ENST00000567188 TEP1Q99973 2627 aaKnown RBP3.59□□□□□ -1.83
CNOT1-211ENST00000567188 PLAC8Q9NZF1 115 aa3.59□□□□□ -1.84
CNOT1-211ENST00000567188 VPS13DQ5THJ4 4388 aa3.58□□□□□ -1.84
CNOT1-211ENST00000567188 KRTAP21-3Q3LHN1 58 aa3.58□□□□□ -1.84
CNOT1-211ENST00000567188 ADM2Q7Z4H4 148 aa3.58□□□□□ -1.84
CNOT1-211ENST00000567188 M0QZ58 72 aa3.58□□□□□ -1.84
CNOT1-211ENST00000567188 ITPR2Q14571 2701 aa3.58□□□□□ -1.84
CNOT1-211ENST00000567188 KRTAP26-1Q6PEX3 210 aa3.58□□□□□ -1.84
CNOT1-211ENST00000567188 FLNBO75369 2602 aaKnown RBP3.57□□□□□ -1.84
CNOT1-211ENST00000567188 DNAH10Q8IVF4 4471 aa3.57□□□□□ -1.84
CNOT1-211ENST00000567188 ITPR1Q14643 2758 aa3.57□□□□□ -1.84
CNOT1-211ENST00000567188 TEX15Q9BXT5 2789 aa3.57□□□□□ -1.84
CNOT1-211ENST00000567188 PDZD2O15018 2839 aa3.57□□□□□ -1.84
CNOT1-211ENST00000567188 Q8NDZ9 215 aa3.57□□□□□ -1.84
CNOT1-211ENST00000567188 DNAH6Q9C0G6 4158 aa3.56□□□□□ -1.84
CNOT1-211ENST00000567188 A8MUU9 505 aa3.56□□□□□ -1.84
CNOT1-211ENST00000567188 HECTD1Q9ULT8 2610 aa3.56□□□□□ -1.84
CNOT1-211ENST00000567188 TENM4Q6N022 2769 aa3.56□□□□□ -1.84
CNOT1-211ENST00000567188 UNC79Q9P2D8 2635 aa3.55□□□□□ -1.84
CNOT1-211ENST00000567188 KMT2AQ03164 3969 aa3.55□□□□□ -1.84
CNOT1-211ENST00000567188 SETXQ7Z333 2677 aaKnown RBP3.54□□□□□ -1.84
CNOT1-211ENST00000567188 CELSR2Q9HCU4 2923 aa3.54□□□□□ -1.84
CNOT1-211ENST00000567188 IGSF10Q6WRI0 2623 aa3.53□□□□□ -1.84
CNOT1-211ENST00000567188 KRTAP11-1Q8IUC1 163 aa3.53□□□□□ -1.84
CNOT1-211ENST00000567188 A8MU10 97 aa3.53□□□□□ -1.84
CNOT1-211ENST00000567188 OTOGQ6ZRI0 2925 aa3.52□□□□□ -1.85
CNOT1-211ENST00000567188 KRTAP4-16G5E9R7 235 aaPredicted RBP3.51□□□□□ -1.85
CNOT1-211ENST00000567188 HECTD4Q9Y4D8 3996 aa3.5□□□□□ -1.85
CNOT1-211ENST00000567188 RPS29P62273 56 aaKnown RBP3.5□□□□□ -1.85
CNOT1-211ENST00000567188 UBR5O95071 2799 aaPredicted RBP3.5□□□□□ -1.85
CNOT1-211ENST00000567188 NSD1Q96L73 2696 aaPredicted RBP3.5□□□□□ -1.85
CNOT1-211ENST00000567188 STAB1Q9NY15 2570 aa3.48□□□□□ -1.85
CNOT1-211ENST00000567188 MAP1AP78559 2803 aaPredicted RBP3.48□□□□□ -1.85
CNOT1-211ENST00000567188 Q6ZRN7 208 aaPredicted RBP3.47□□□□□ -1.85
CNOT1-211ENST00000567188 NOTCH1P46531 2555 aa3.47□□□□□ -1.85
CNOT1-211ENST00000567188 APCP25054 2843 aa3.47□□□□□ -1.85
CNOT1-211ENST00000567188 FBN1P35555 2871 aaKnown RBP3.46□□□□□ -1.86
CNOT1-211ENST00000567188 COL6A5A8TX70 2615 aa3.45□□□□□ -1.86
CNOT1-211ENST00000567188 PP632Q6XCG6 107 aa3.45□□□□□ -1.86
CNOT1-211ENST00000567188 DNAH2Q9P225 4427 aa3.45□□□□□ -1.86
CNOT1-211ENST00000567188 STAB2Q8WWQ8 2551 aa3.44□□□□□ -1.86
CNOT1-211ENST00000567188 FAT2Q9NYQ8 4349 aa3.44□□□□□ -1.86
CNOT1-211ENST00000567188 TACC2O95359 2948 aa3.44□□□□□ -1.86
CNOT1-211ENST00000567188 PRO2289Q9P1D8 64 aa3.44□□□□□ -1.86
CNOT1-211ENST00000567188 STARD9Q9P2P6 4700 aa3.43□□□□□ -1.86
CNOT1-211ENST00000567188 KRTAP7-1Q8IUC3 87 aa3.42□□□□□ -1.86
CNOT1-211ENST00000567188 DMBT1Q9UGM3 2413 aaPredicted RBP3.42□□□□□ -1.86
CNOT1-211ENST00000567188 PLECQ15149 4684 aaKnown RBP3.42□□□□□ -1.86
CNOT1-211ENST00000567188 PKHD1L1Q86WI1 4243 aa3.41□□□□□ -1.86
CNOT1-211ENST00000567188 NBEAL2Q6ZNJ1 2754 aa3.41□□□□□ -1.86
CNOT1-211ENST00000567188 TNP1P09430 55 aa3.4□□□□□ -1.86
CNOT1-211ENST00000567188 DNAH17Q9UFH2 4485 aa3.4□□□□□ -1.87
CNOT1-211ENST00000567188 FLNCQ14315 2725 aa3.39□□□□□ -1.87
CNOT1-211ENST00000567188 A0A1B0GVY2 172 aa3.37□□□□□ -1.87
CNOT1-211ENST00000567188 DNAH11Q96DT5 4516 aa3.37□□□□□ -1.87
CNOT1-211ENST00000567188 DNAH8Q96JB1 4490 aa3.36□□□□□ -1.87
CNOT1-211ENST00000567188 NIPBLQ6KC79 2804 aaeCLIP3.35□□□□□ -1.871e-11■■■□□ 15.4
CNOT1-211ENST00000567188 KRTAP13-1Q8IUC0 172 aa3.34□□□□□ -1.88
CNOT1-211ENST00000567188 VPS13BQ7Z7G8 4022 aa3.33□□□□□ -1.88
CNOT1-211ENST00000567188 BAHCC1Q9P281 2608 aa3.32□□□□□ -1.88
CNOT1-211ENST00000567188 KRTAP10-8P60410 259 aa3.31□□□□□ -1.88
CNOT1-211ENST00000567188 PKD1P98161 4303 aa3.3□□□□□ -1.88
CNOT1-211ENST00000567188 DNAH5Q8TE73 4624 aa3.29□□□□□ -1.88
CNOT1-211ENST00000567188 KRTAP13-2Q52LG2 175 aa3.29□□□□□ -1.88
CNOT1-211ENST00000567188 SACSQ9NZJ4 4579 aa3.29□□□□□ -1.88
CNOT1-211ENST00000567188 H0YAA0 97 aa3.28□□□□□ -1.88
CNOT1-211ENST00000567188 KRTAP4-5Q9BYR2 181 aa3.27□□□□□ -1.89
CNOT1-211ENST00000567188 C10orf95Q9H7T3 257 aa3.27□□□□□ -1.89
CNOT1-211ENST00000567188 HYDINQ4G0P3 5121 aa3.25□□□□□ -1.89
CNOT1-211ENST00000567188 PKHD1P08F94 4074 aa3.24□□□□□ -1.89
CNOT1-211ENST00000567188 KRTAP10-10P60014 251 aa3.23□□□□□ -1.89
CNOT1-211ENST00000567188 INE1O15225 51 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms