RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 KRTAP15-1Q3LI76 137 aa6.49□□□□□ -1.37
KARS-207ENST00000566560 PRO0461Q9UI25 63 aa6.49□□□□□ -1.37
KARS-207ENST00000566560 LOC110117498A0A087WWA1 95 aa6.48□□□□□ -1.37
KARS-207ENST00000566560 FP248Q71RG6 208 aaPredicted RBP6.48□□□□□ -1.37
KARS-207ENST00000566560 OBSCN-AS1Q96MR7 158 aa6.48□□□□□ -1.37
KARS-207ENST00000566560 SS18L2Q9UHA2 77 aa6.48□□□□□ -1.37
KARS-207ENST00000566560 IGLV7-46A0A075B6I9 117 aa6.46□□□□□ -1.38
KARS-207ENST00000566560 PDE6GP18545 87 aa6.46□□□□□ -1.38
KARS-207ENST00000566560 Q6ZQT0 140 aa6.46□□□□□ -1.38
KARS-207ENST00000566560 A0A1B0GV90 55 aa6.45□□□□□ -1.38
KARS-207ENST00000566560 ASB16-AS1Q495Z4 193 aa6.45□□□□□ -1.38
KARS-207ENST00000566560 F8W1H4 67 aa6.44□□□□□ -1.38
KARS-207ENST00000566560 C1orf195Q5TG92 126 aa6.44□□□□□ -1.38
KARS-207ENST00000566560 HMCN2Q8NDA2 5059 aa6.42□□□□□ -1.38
KARS-207ENST00000566560 TPRXLQ17RH7 258 aa6.41□□□□□ -1.38
KARS-207ENST00000566560 A0A1B0GW54 56 aa6.38□□□□□ -1.39
KARS-207ENST00000566560 ETDBQ3ZM63 59 aa6.38□□□□□ -1.39
KARS-207ENST00000566560 Q96NJ1 140 aa6.38□□□□□ -1.39
KARS-207ENST00000566560 SIGMAR1Q99720 223 aa6.38□□□□□ -1.39
KARS-207ENST00000566560 KRTAP13-3Q3SY46 172 aa6.37□□□□□ -1.39
KARS-207ENST00000566560 IGKV4-1P06312 121 aa6.34□□□□□ -1.39
KARS-207ENST00000566560 PCP4P48539 62 aa6.34□□□□□ -1.39
KARS-207ENST00000566560 LINC00472Q9H8W2 130 aa6.34□□□□□ -1.39
KARS-207ENST00000566560 C9orf92A6NGG3 77 aa6.33□□□□□ -1.4
KARS-207ENST00000566560 DEFB116Q30KQ4 102 aa6.33□□□□□ -1.4
KARS-207ENST00000566560 LPAP08519 4548 aa6.33□□□□□ -1.4
KARS-207ENST00000566560 NREPQ16612 68 aa6.31□□□□□ -1.4
KARS-207ENST00000566560 LRP2P98164 4655 aa6.3□□□□□ -1.4
KARS-207ENST00000566560 J3KT08 172 aa6.3□□□□□ -1.4
KARS-207ENST00000566560 Q6ZVQ6 151 aa6.27□□□□□ -1.41
KARS-207ENST00000566560 LINC00846Q9NV44 126 aa6.27□□□□□ -1.41
KARS-207ENST00000566560 IGHV6-1A0A0B4J1U7 121 aa6.26□□□□□ -1.41
KARS-207ENST00000566560 DSCR10P59022 87 aa6.26□□□□□ -1.41
KARS-207ENST00000566560 UBL5Q9BZL1 73 aa6.26□□□□□ -1.41
KARS-207ENST00000566560 A0A1B0GVX0 72 aa6.25□□□□□ -1.41
KARS-207ENST00000566560 A8MWP4 228 aa6.25□□□□□ -1.41
KARS-207ENST00000566560 NDUFB1O75438 58 aa6.24□□□□□ -1.41
KARS-207ENST00000566560 BPY2O14599 106 aa6.23□□□□□ -1.41
KARS-207ENST00000566560 UBR4Q5T4S7 5183 aa6.22□□□□□ -1.41
KARS-207ENST00000566560 FAM240AA0A1B0GVK7 77 aa6.22□□□□□ -1.41
KARS-207ENST00000566560 C8orf87E5RJ46 101 aa6.22□□□□□ -1.41
KARS-207ENST00000566560 LINC00313P59037 77 aa6.22□□□□□ -1.41
KARS-207ENST00000566560 IGKV3D-7A0A0C4DH55 119 aa6.21□□□□□ -1.42
KARS-207ENST00000566560 ACYP1P07311 99 aa6.21□□□□□ -1.42
KARS-207ENST00000566560 K7EQZ3 153 aa6.2□□□□□ -1.42
KARS-207ENST00000566560 RPL37P61927 97 aaKnown RBP6.2□□□□□ -1.42
KARS-207ENST00000566560 NOTCH2NLQ7Z3S9 236 aa6.2□□□□□ -1.42
KARS-207ENST00000566560 SEC61BP60468 96 aaKnown RBP6.19□□□□□ -1.42
KARS-207ENST00000566560 PRR15Q8IV56 129 aa6.19□□□□□ -1.42
KARS-207ENST00000566560 KRTAP16-1A8MUX0 517 aa6.18□□□□□ -1.42
KARS-207ENST00000566560 C8orf17Q9NRJ1 99 aa6.18□□□□□ -1.42
KARS-207ENST00000566560 J3QR89 54 aa6.17□□□□□ -1.42
KARS-207ENST00000566560 Q75L30 129 aa6.17□□□□□ -1.42
KARS-207ENST00000566560 Q8N9L7 120 aa6.17□□□□□ -1.42
KARS-207ENST00000566560 C20orf166-AS1Q96NR2 134 aa6.16□□□□□ -1.42
KARS-207ENST00000566560 MUC17Q685J3 4493 aa6.15□□□□□ -1.42
KARS-207ENST00000566560 MMP24-AS1A0A0U1RRL7 71 aa6.15□□□□□ -1.42
KARS-207ENST00000566560 A8MUU9 505 aa6.15□□□□□ -1.42
KARS-207ENST00000566560 CXCL6P80162 114 aa6.14□□□□□ -1.43
KARS-207ENST00000566560 PCOTHQ58A44 107 aa6.14□□□□□ -1.43
KARS-207ENST00000566560 A0A0A0MQY5 61 aa6.13□□□□□ -1.43
KARS-207ENST00000566560 ATP5EP2Q5VTU8 51 aa6.13□□□□□ -1.43
KARS-207ENST00000566560 ATP11AUNQ6ZP68 121 aa6.11□□□□□ -1.43
KARS-207ENST00000566560 TMEM254Q8TBM7 123 aa6.11□□□□□ -1.43
KARS-207ENST00000566560 hDV103S1A0JD37 113 aa6.1□□□□□ -1.43
KARS-207ENST00000566560 WFDC13Q8IUB5 93 aa6.09□□□□□ -1.43
KARS-207ENST00000566560 MRPL34Q9BQ48 92 aaKnown RBP6.09□□□□□ -1.43
KARS-207ENST00000566560 HCG22E2RYF7 251 aa6.08□□□□□ -1.44
KARS-207ENST00000566560 CASC2Q6XLA1 102 aa6.08□□□□□ -1.44
KARS-207ENST00000566560 LINC00643Q86TS7 51 aa6.08□□□□□ -1.44
KARS-207ENST00000566560 Q8N9P0 234 aaPredicted RBP6.08□□□□□ -1.44
KARS-207ENST00000566560 K7ERU9 68 aa6.07□□□□□ -1.44
KARS-207ENST00000566560 RNF213Q63HN8 5207 aa6.07□□□□□ -1.44
KARS-207ENST00000566560 KRTAP4-1Q9BYQ7 146 aa6.06□□□□□ -1.44
KARS-207ENST00000566560 NDUFS5O43920 106 aa6.05□□□□□ -1.44
KARS-207ENST00000566560 HIST1H4AP62805 103 aaKnown RBP6.04□□□□□ -1.44
KARS-207ENST00000566560 ZCCHC13Q8WW36 166 aaKnown RBP6.03□□□□□ -1.44
KARS-207ENST00000566560 MPLKIPQ8TAP9 179 aa6.02□□□□□ -1.45
KARS-207ENST00000566560 MUC2Q02817 5179 aa5.98□□□□□ -1.45
KARS-207ENST00000566560 A0A087WVE0 104 aa5.98□□□□□ -1.45
KARS-207ENST00000566560 A0A0U1RQV1 116 aa5.98□□□□□ -1.45
KARS-207ENST00000566560 TP53AIP1Q9HCN2 124 aa5.93□□□□□ -1.46
KARS-207ENST00000566560 MT-ATP8P03928 68 aa5.92□□□□□ -1.46
KARS-207ENST00000566560 Q5W150 140 aa5.92□□□□□ -1.46
KARS-207ENST00000566560 SPINK7P58062 85 aa5.9□□□□□ -1.46
KARS-207ENST00000566560 IMUPQ9GZP8 106 aa5.89□□□□□ -1.47
KARS-207ENST00000566560 IGKV2D-30A0A075B6S6 120 aa5.88□□□□□ -1.47
KARS-207ENST00000566560 IGKV2-30P06310 120 aa5.88□□□□□ -1.47
KARS-207ENST00000566560 HRES1P13985 223 aa5.87□□□□□ -1.47
KARS-207ENST00000566560 KRTAP19-2Q3LHN2 52 aa5.87□□□□□ -1.47
KARS-207ENST00000566560 COX6B2Q6YFQ2 88 aa5.87□□□□□ -1.47
KARS-207ENST00000566560 C7orf65Q6ZTY9 151 aa5.87□□□□□ -1.47
KARS-207ENST00000566560 TRAV22A0A0B4J277 110 aa5.86□□□□□ -1.47
KARS-207ENST00000566560 UQCRQO14949 82 aa5.85□□□□□ -1.47
KARS-207ENST00000566560 RBM12B-AS1Q9P1G2 102 aa5.84□□□□□ -1.47
KARS-207ENST00000566560 FAM236DA0A1B0GTK5 79 aa5.83□□□□□ -1.48
KARS-207ENST00000566560 FAM236CP0DP71 79 aa5.83□□□□□ -1.48
KARS-207ENST00000566560 SCGB1A1P11684 91 aa5.83□□□□□ -1.48
KARS-207ENST00000566560 FAM236AA0A1B0GUQ0 79 aa5.82□□□□□ -1.48
KARS-207ENST00000566560 FAM236BA0A1B0GV22 79 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms