RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 DNAH6Q9C0G6 4158 aa9.01□□□□□ -0.97
HERC2-207ENST00000564734 A0A087X002 238 aa9□□□□□ -0.97
HERC2-207ENST00000564734 NOTCH2NLQ7Z3S9 236 aa9□□□□□ -0.97
HERC2-207ENST00000564734 KMT2CQ8NEZ4 4911 aaKnown RBP8.99□□□□□ -0.97
HERC2-207ENST00000564734 IGLV7-46A0A075B6I9 117 aa8.99□□□□□ -0.97
HERC2-207ENST00000564734 ALMS1Q8TCU4 4167 aa8.99□□□□□ -0.97
HERC2-207ENST00000564734 HYDINQ4G0P3 5121 aa8.99□□□□□ -0.97
HERC2-207ENST00000564734 MRPL34Q9BQ48 92 aaKnown RBP8.98□□□□□ -0.97
HERC2-207ENST00000564734 CDK2AP2O75956 126 aa8.97□□□□□ -0.97
HERC2-207ENST00000564734 DNAH11Q96DT5 4516 aa8.96□□□□□ -0.97
HERC2-207ENST00000564734 DNAH5Q8TE73 4624 aa8.95□□□□□ -0.98
HERC2-207ENST00000564734 CD164Q04900 197 aa8.95□□□□□ -0.98
HERC2-207ENST00000564734 SACSQ9NZJ4 4579 aa8.94□□□□□ -0.98
HERC2-207ENST00000564734 KRTAP10-2P60368 255 aa8.93□□□□□ -0.98
HERC2-207ENST00000564734 CIRBP-AS1Q8TBR5 109 aa8.93□□□□□ -0.98
HERC2-207ENST00000564734 NDUFS5O43920 106 aa8.92□□□□□ -0.98
HERC2-207ENST00000564734 PCOTHQ58A44 107 aa8.92□□□□□ -0.98
HERC2-207ENST00000564734 SSBP3-AS1Q7Z2R9 100 aa8.91□□□□□ -0.98
HERC2-207ENST00000564734 Q8N9P0 234 aaPredicted RBP8.9□□□□□ -0.98
HERC2-207ENST00000564734 COA5Q86WW8 74 aa8.89□□□□□ -0.99
HERC2-207ENST00000564734 A8MU10 97 aa8.89□□□□□ -0.99
HERC2-207ENST00000564734 KRTAP13-3Q3SY46 172 aa8.88□□□□□ -0.99
HERC2-207ENST00000564734 SPINK6Q6UWN8 80 aa8.88□□□□□ -0.99
HERC2-207ENST00000564734 A8MUN3 132 aa8.87□□□□□ -0.99
HERC2-207ENST00000564734 Q6ZSA8 131 aa8.86□□□□□ -0.99
HERC2-207ENST00000564734 Q5W150 140 aa8.85□□□□□ -0.99
HERC2-207ENST00000564734 Q5VV11 94 aa8.85□□□□□ -0.99
HERC2-207ENST00000564734 SPTSSBQ8NFR3 76 aa8.84□□□□□ -0.99
HERC2-207ENST00000564734 LIMD2Q9BT23 127 aa8.83□□□□□ -1
HERC2-207ENST00000564734 KRTAP13-2Q52LG2 175 aa8.83□□□□□ -1
HERC2-207ENST00000564734 KRTAP10-1P60331 282 aa8.83□□□□□ -1
HERC2-207ENST00000564734 PKD1P98161 4303 aa8.82□□□□□ -1
HERC2-207ENST00000564734 C8orf87E5RJ46 101 aa8.82□□□□□ -1
HERC2-207ENST00000564734 LOC101927531A0A1B0GV80 90 aa8.81□□□□□ -1
HERC2-207ENST00000564734 PMAIP1Q13794 54 aa8.81□□□□□ -1
HERC2-207ENST00000564734 FAT2Q9NYQ8 4349 aa8.81□□□□□ -1
HERC2-207ENST00000564734 LRP1BQ9NZR2 4599 aa8.81□□□□□ -1
HERC2-207ENST00000564734 RYR2Q92736 4967 aa8.81□□□□□ -1
HERC2-207ENST00000564734 RYR3Q15413 4870 aa8.78□□□□□ -1
HERC2-207ENST00000564734 HRES1P13985 223 aa8.78□□□□□ -1
HERC2-207ENST00000564734 CHKB-CPT1BH3BT56 60 aa8.78□□□□□ -1
HERC2-207ENST00000564734 KRTAP1-4P0C5Y4 121 aa8.76□□□□□ -1.01
HERC2-207ENST00000564734 PRR15LQ9BU68 103 aa8.76□□□□□ -1.01
HERC2-207ENST00000564734 LINC00313P59037 77 aa8.74□□□□□ -1.01
HERC2-207ENST00000564734 Q75L30 129 aa8.73□□□□□ -1.01
HERC2-207ENST00000564734 LINC01558Q9Y6Z2 57 aa8.72□□□□□ -1.01
HERC2-207ENST00000564734 KRTAP16-1A8MUX0 517 aa8.71□□□□□ -1.02
HERC2-207ENST00000564734 PKHD1P08F94 4074 aa8.69□□□□□ -1.02
HERC2-207ENST00000564734 SPAG11AQ6PDA7 123 aa8.68□□□□□ -1.02
HERC2-207ENST00000564734 FAM229AH3BQW9 127 aa8.67□□□□□ -1.02
HERC2-207ENST00000564734 A6NED7 52 aa8.66□□□□□ -1.02
HERC2-207ENST00000564734 VPS13BQ7Z7G8 4022 aa8.66□□□□□ -1.02
HERC2-207ENST00000564734 IGKV2-30P06310 120 aa8.64□□□□□ -1.03
HERC2-207ENST00000564734 LCA10Q71F78 164 aa8.62□□□□□ -1.03
HERC2-207ENST00000564734 DMAC1Q96GE9 116 aa8.62□□□□□ -1.03
HERC2-207ENST00000564734 ACYP2P14621 99 aa8.62□□□□□ -1.03
HERC2-207ENST00000564734 RETNLBQ9BQ08 111 aa8.62□□□□□ -1.03
HERC2-207ENST00000564734 PRR26Q8N8Z3 221 aa8.6□□□□□ -1.03
HERC2-207ENST00000564734 PLA2G1BP04054 148 aaKnown RBP8.6□□□□□ -1.03
HERC2-207ENST00000564734 SMR3BP02814 79 aaPredicted RBP8.59□□□□□ -1.03
HERC2-207ENST00000564734 A0A1B0GVY2 172 aa8.58□□□□□ -1.04
HERC2-207ENST00000564734 TYMSOSQ8TAI1 123 aa8.58□□□□□ -1.04
HERC2-207ENST00000564734 SPINK1P00995 79 aa8.56□□□□□ -1.04
HERC2-207ENST00000564734 DYNC1H1Q14204 4646 aaKnown RBP8.54□□□□□ -1.04
HERC2-207ENST00000564734 CDC42SE1Q9NRR8 79 aa8.54□□□□□ -1.04
HERC2-207ENST00000564734 SPINK7P58062 85 aa8.52□□□□□ -1.05
HERC2-207ENST00000564734 EPPK1P58107 5090 aaKnown RBP8.51□□□□□ -1.05
HERC2-207ENST00000564734 ATP11AUNQ6ZP68 121 aa8.51□□□□□ -1.05
HERC2-207ENST00000564734 RPS29P62273 56 aaKnown RBP8.49□□□□□ -1.05
HERC2-207ENST00000564734 IGKV2D-30A0A075B6S6 120 aa8.46□□□□□ -1.06
HERC2-207ENST00000564734 LINC00304Q8N9R0 145 aa8.46□□□□□ -1.06
HERC2-207ENST00000564734 RBM12B-AS1Q9P1G2 102 aa8.46□□□□□ -1.06
HERC2-207ENST00000564734 FLG2Q5D862 2391 aaPredicted RBP8.45□□□□□ -1.06
HERC2-207ENST00000564734 KTN1-AS1Q86SY8 53 aa8.43□□□□□ -1.06
HERC2-207ENST00000564734 KIAA1109Q2LD37 5005 aa8.43□□□□□ -1.06
HERC2-207ENST00000564734 FAT1Q14517 4588 aa8.42□□□□□ -1.06
HERC2-207ENST00000564734 PKHD1L1Q86WI1 4243 aa8.42□□□□□ -1.06
HERC2-207ENST00000564734 A6NN06 94 aa8.41□□□□□ -1.06
HERC2-207ENST00000564734 KRTAP10-4P60372 401 aaPredicted RBP8.4□□□□□ -1.07
HERC2-207ENST00000564734 C7orf65Q6ZTY9 151 aa8.37□□□□□ -1.07
HERC2-207ENST00000564734 APOBP04114 4563 aaKnown RBP8.36□□□□□ -1.07
HERC2-207ENST00000564734 A0A1B0GU69 56 aa8.36□□□□□ -1.07
HERC2-207ENST00000564734 H3BS24 57 aa8.34□□□□□ -1.08
HERC2-207ENST00000564734 PRAC1Q96KF2 57 aa8.32□□□□□ -1.08
HERC2-207ENST00000564734 A8MUU9 505 aa8.31□□□□□ -1.08
HERC2-207ENST00000564734 Q5VSD8 79 aa8.31□□□□□ -1.08
HERC2-207ENST00000564734 C20orf166-AS1Q96NR2 134 aa8.31□□□□□ -1.08
HERC2-207ENST00000564734 SPATA8Q6RVD6 105 aa8.27□□□□□ -1.08
HERC2-207ENST00000564734 Q8N1X5 172 aa8.27□□□□□ -1.09
HERC2-207ENST00000564734 C9orf92A6NGG3 77 aa8.26□□□□□ -1.09
HERC2-207ENST00000564734 HSPG2P98160 4391 aa8.26□□□□□ -1.09
HERC2-207ENST00000564734 RYR1P21817 5038 aa8.26□□□□□ -1.09
HERC2-207ENST00000564734 ADM2Q7Z4H4 148 aa8.25□□□□□ -1.09
HERC2-207ENST00000564734 KRTAP17-1Q9BYP8 105 aa8.21□□□□□ -1.09
HERC2-207ENST00000564734 UQCR11O14957 56 aa8.2□□□□□ -1.1
HERC2-207ENST00000564734 DMBT1Q9UGM3 2413 aaPredicted RBP8.19□□□□□ -1.1
HERC2-207ENST00000564734 MIR22HGQ0VDD5 57 aa8.19□□□□□ -1.1
HERC2-207ENST00000564734 KRTAP3-1Q9BYR8 98 aa8.18□□□□□ -1.1
HERC2-207ENST00000564734 BIRC6Q9NR09 4857 aa8.17□□□□□ -1.1
HERC2-207ENST00000564734 J3QL48 77 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms