RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 LINC00472Q9H8W2 130 aa5.57□□□□□ -1.52
LINC00838-201ENST00000562956 CHKB-CPT1BH3BT56 60 aa5.57□□□□□ -1.52
LINC00838-201ENST00000562956 DYNC1H1Q14204 4646 aaKnown RBP5.56□□□□□ -1.52
LINC00838-201ENST00000562956 A0A087X002 238 aa5.55□□□□□ -1.52
LINC00838-201ENST00000562956 LINC00208Q96KT6 92 aa5.54□□□□□ -1.52
LINC00838-201ENST00000562956 SMR3BP02814 79 aaPredicted RBP5.54□□□□□ -1.52
LINC00838-201ENST00000562956 ZCCHC13Q8WW36 166 aaKnown RBP5.54□□□□□ -1.52
LINC00838-201ENST00000562956 Q96NJ1 140 aa5.54□□□□□ -1.52
LINC00838-201ENST00000562956 PRR15LQ9BU68 103 aa5.54□□□□□ -1.52
LINC00838-201ENST00000562956 KRTAP1-4P0C5Y4 121 aa5.53□□□□□ -1.52
LINC00838-201ENST00000562956 KRTAP13-2Q52LG2 175 aa5.53□□□□□ -1.52
LINC00838-201ENST00000562956 Q5VV11 94 aa5.53□□□□□ -1.52
LINC00838-201ENST00000562956 HCG22E2RYF7 251 aa5.52□□□□□ -1.53
LINC00838-201ENST00000562956 SSBP3-AS1Q7Z2R9 100 aa5.52□□□□□ -1.53
LINC00838-201ENST00000562956 A8MWP4 228 aa5.51□□□□□ -1.53
LINC00838-201ENST00000562956 CD164Q04900 197 aa5.5□□□□□ -1.53
LINC00838-201ENST00000562956 APOBP04114 4563 aaKnown RBP5.5□□□□□ -1.53
LINC00838-201ENST00000562956 MP68P56378 58 aa5.49□□□□□ -1.53
LINC00838-201ENST00000562956 A6NED7 52 aa5.49□□□□□ -1.53
LINC00838-201ENST00000562956 PLA2G1BP04054 148 aaKnown RBP5.48□□□□□ -1.53
LINC00838-201ENST00000562956 CYP4F30PQ9H0H9 118 aa5.48□□□□□ -1.53
LINC00838-201ENST00000562956 RBM12B-AS1Q9P1G2 102 aa5.48□□□□□ -1.53
LINC00838-201ENST00000562956 SPINK6Q6UWN8 80 aa5.48□□□□□ -1.53
LINC00838-201ENST00000562956 RYR3Q15413 4870 aa5.48□□□□□ -1.53
LINC00838-201ENST00000562956 KRTAP10-4P60372 401 aaPredicted RBP5.47□□□□□ -1.53
LINC00838-201ENST00000562956 Q8N9P0 234 aaPredicted RBP5.47□□□□□ -1.53
LINC00838-201ENST00000562956 KRTAP29-1A8MX34 341 aaPredicted RBP5.47□□□□□ -1.53
LINC00838-201ENST00000562956 H0Y9P7 68 aa5.46□□□□□ -1.54
LINC00838-201ENST00000562956 NDUFB1O75438 58 aa5.46□□□□□ -1.54
LINC00838-201ENST00000562956 LCA10Q71F78 164 aa5.46□□□□□ -1.54
LINC00838-201ENST00000562956 CASC2Q6XLA1 102 aa5.45□□□□□ -1.54
LINC00838-201ENST00000562956 FAT1Q14517 4588 aa5.45□□□□□ -1.54
LINC00838-201ENST00000562956 KTN1-AS1Q86SY8 53 aa5.45□□□□□ -1.54
LINC00838-201ENST00000562956 MMP24-AS1A0A0U1RRL7 71 aa5.44□□□□□ -1.54
LINC00838-201ENST00000562956 PCOTHQ58A44 107 aa5.44□□□□□ -1.54
LINC00838-201ENST00000562956 TYMSOSQ8TAI1 123 aa5.44□□□□□ -1.54
LINC00838-201ENST00000562956 IGHV6-1A0A0B4J1U7 121 aa5.43□□□□□ -1.54
LINC00838-201ENST00000562956 A0A1B0GVX0 72 aa5.43□□□□□ -1.54
LINC00838-201ENST00000562956 PRR26Q8N8Z3 221 aa5.43□□□□□ -1.54
LINC00838-201ENST00000562956 CDK2AP2O75956 126 aa5.42□□□□□ -1.54
LINC00838-201ENST00000562956 ASB16-AS1Q495Z4 193 aa5.42□□□□□ -1.54
LINC00838-201ENST00000562956 SPAG11AQ6PDA7 123 aa5.42□□□□□ -1.54
LINC00838-201ENST00000562956 NOTCH2NLQ7Z3S9 236 aa5.41□□□□□ -1.54
LINC00838-201ENST00000562956 LIMD2Q9BT23 127 aa5.41□□□□□ -1.54
LINC00838-201ENST00000562956 C8orf17Q9NRJ1 99 aa5.41□□□□□ -1.54
LINC00838-201ENST00000562956 COA5Q86WW8 74 aa5.41□□□□□ -1.54
LINC00838-201ENST00000562956 C4orf48Q5BLP8 95 aa5.38□□□□□ -1.55
LINC00838-201ENST00000562956 ATP11AUNQ6ZP68 121 aa5.37□□□□□ -1.55
LINC00838-201ENST00000562956 SPINK1P00995 79 aa5.37□□□□□ -1.55
LINC00838-201ENST00000562956 HSPG2P98160 4391 aa5.36□□□□□ -1.55
LINC00838-201ENST00000562956 A6NN06 94 aa5.36□□□□□ -1.55
LINC00838-201ENST00000562956 LINC00304Q8N9R0 145 aa5.36□□□□□ -1.55
LINC00838-201ENST00000562956 FAM229AH3BQW9 127 aa5.35□□□□□ -1.55
LINC00838-201ENST00000562956 Q75L30 129 aa5.35□□□□□ -1.55
LINC00838-201ENST00000562956 SPINK7P58062 85 aa5.35□□□□□ -1.55
LINC00838-201ENST00000562956 SPANXA2-OT1Q8N9U9 137 aa5.34□□□□□ -1.55
LINC00838-201ENST00000562956 MRPL34Q9BQ48 92 aaKnown RBP5.34□□□□□ -1.55
LINC00838-201ENST00000562956 LOC101927531A0A1B0GV80 90 aa5.34□□□□□ -1.55
LINC00838-201ENST00000562956 Q5VSD8 79 aa5.34□□□□□ -1.56
LINC00838-201ENST00000562956 PRAC1Q96KF2 57 aa5.34□□□□□ -1.56
LINC00838-201ENST00000562956 KRTAP17-1Q9BYP8 105 aa5.33□□□□□ -1.56
LINC00838-201ENST00000562956 NDUFS5O43920 106 aa5.33□□□□□ -1.56
LINC00838-201ENST00000562956 CDC42SE1Q9NRR8 79 aa5.33□□□□□ -1.56
LINC00838-201ENST00000562956 PKHD1L1Q86WI1 4243 aa5.33□□□□□ -1.56
LINC00838-201ENST00000562956 C8orf87E5RJ46 101 aa5.31□□□□□ -1.56
LINC00838-201ENST00000562956 LINC00313P59037 77 aa5.31□□□□□ -1.56
LINC00838-201ENST00000562956 RPS29P62273 56 aaKnown RBP5.31□□□□□ -1.56
LINC00838-201ENST00000562956 C7orf65Q6ZTY9 151 aa5.31□□□□□ -1.56
LINC00838-201ENST00000562956 TP53AIP1Q9HCN2 124 aa5.31□□□□□ -1.56
LINC00838-201ENST00000562956 RYR1P21817 5038 aa5.31□□□□□ -1.56
LINC00838-201ENST00000562956 ADM2Q7Z4H4 148 aa5.29□□□□□ -1.56
LINC00838-201ENST00000562956 IGLV7-46A0A075B6I9 117 aa5.28□□□□□ -1.56
LINC00838-201ENST00000562956 EPPK1P58107 5090 aaKnown RBP5.28□□□□□ -1.56
LINC00838-201ENST00000562956 H3BPC8 53 aa5.27□□□□□ -1.57
LINC00838-201ENST00000562956 KRTAP16-1A8MUX0 517 aa5.27□□□□□ -1.57
LINC00838-201ENST00000562956 KIAA1109Q2LD37 5005 aa5.27□□□□□ -1.57
LINC00838-201ENST00000562956 Q5W150 140 aa5.26□□□□□ -1.57
LINC00838-201ENST00000562956 LRP1Q07954 4544 aaKnown RBP5.26□□□□□ -1.57
LINC00838-201ENST00000562956 HRES1P13985 223 aa5.26□□□□□ -1.57
LINC00838-201ENST00000562956 LINC01558Q9Y6Z2 57 aa5.25□□□□□ -1.57
LINC00838-201ENST00000562956 Q8N1X5 172 aa5.24□□□□□ -1.57
LINC00838-201ENST00000562956 TNXBP22105 4242 aa5.24□□□□□ -1.57
LINC00838-201ENST00000562956 KRTAP13-3Q3SY46 172 aa5.24□□□□□ -1.57
LINC00838-201ENST00000562956 KRTAP10-8P60410 259 aa5.24□□□□□ -1.57
LINC00838-201ENST00000562956 RETNLBQ9BQ08 111 aa5.24□□□□□ -1.57
LINC00838-201ENST00000562956 C9orf92A6NGG3 77 aa5.19□□□□□ -1.58
LINC00838-201ENST00000562956 FLG2Q5D862 2391 aaPredicted RBP5.19□□□□□ -1.58
LINC00838-201ENST00000562956 FAT3Q8TDW7 4589 aa5.18□□□□□ -1.58
LINC00838-201ENST00000562956 MYCBP2O75592 4640 aa5.18□□□□□ -1.58
LINC00838-201ENST00000562956 H3BS24 57 aa5.17□□□□□ -1.58
LINC00838-201ENST00000562956 MT1HL1P0DM35 61 aa5.16□□□□□ -1.58
LINC00838-201ENST00000562956 KRTAP4-5Q9BYR2 181 aa5.13□□□□□ -1.59
LINC00838-201ENST00000562956 IGKV2-30P06310 120 aa5.13□□□□□ -1.59
LINC00838-201ENST00000562956 LINC01554Q52M75 96 aa5.13□□□□□ -1.59
LINC00838-201ENST00000562956 C20orf166-AS1Q96NR2 134 aa5.12□□□□□ -1.59
LINC00838-201ENST00000562956 A8MUU9 505 aa5.11□□□□□ -1.59
LINC00838-201ENST00000562956 IGKV2D-30A0A075B6S6 120 aa5.1□□□□□ -1.59
LINC00838-201ENST00000562956 A0A1B0GU69 56 aa5.1□□□□□ -1.59
LINC00838-201ENST00000562956 DMBT1Q9UGM3 2413 aaPredicted RBP5.1□□□□□ -1.59
LINC00838-201ENST00000562956 CSAG1Q6PB30 78 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms