RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 A0A1B0GVX0 72 aa7□□□□□ -1.29
CMTM4-203ENST00000561680 CXCL6P80162 114 aa7□□□□□ -1.29
CMTM4-203ENST00000561680 TPRXLQ17RH7 258 aa7□□□□□ -1.29
CMTM4-203ENST00000561680 ATP5EP2Q5VTU8 51 aa7□□□□□ -1.29
CMTM4-203ENST00000561680 IGKV3D-7A0A0C4DH55 119 aa6.99□□□□□ -1.29
CMTM4-203ENST00000561680 KRTAP13-3Q3SY46 172 aa6.99□□□□□ -1.29
CMTM4-203ENST00000561680 LINC00643Q86TS7 51 aa6.99□□□□□ -1.29
CMTM4-203ENST00000561680 K7EQZ3 153 aa6.98□□□□□ -1.29
CMTM4-203ENST00000561680 NDUFB1O75438 58 aa6.98□□□□□ -1.29
CMTM4-203ENST00000561680 PRR15Q8IV56 129 aa6.98□□□□□ -1.29
CMTM4-203ENST00000561680 IGHV6-1A0A0B4J1U7 121 aa6.97□□□□□ -1.29
CMTM4-203ENST00000561680 C9orf92A6NGG3 77 aa6.95□□□□□ -1.3
CMTM4-203ENST00000561680 C8orf87E5RJ46 101 aa6.95□□□□□ -1.3
CMTM4-203ENST00000561680 Q8N9L7 120 aa6.95□□□□□ -1.3
CMTM4-203ENST00000561680 NOTCH2NLQ7Z3S9 236 aa6.94□□□□□ -1.3
CMTM4-203ENST00000561680 LCE2BO14633 110 aa6.93□□□□□ -1.3
CMTM4-203ENST00000561680 LINC00313P59037 77 aa6.93□□□□□ -1.3
CMTM4-203ENST00000561680 C8orf17Q9NRJ1 99 aa6.93□□□□□ -1.3
CMTM4-203ENST00000561680 HMCN2Q8NDA2 5059 aa6.92□□□□□ -1.3
CMTM4-203ENST00000561680 LPAP08519 4548 aa6.92□□□□□ -1.3
CMTM4-203ENST00000561680 MMP24-AS1A0A0U1RRL7 71 aa6.92□□□□□ -1.3
CMTM4-203ENST00000561680 KRTAP16-1A8MUX0 517 aa6.9□□□□□ -1.3
CMTM4-203ENST00000561680 XP32Q5T750 250 aa6.9□□□□□ -1.3
CMTM4-203ENST00000561680 hDV103S1A0JD37 113 aa6.86□□□□□ -1.31
CMTM4-203ENST00000561680 HCG22E2RYF7 251 aa6.86□□□□□ -1.31
CMTM4-203ENST00000561680 MT-ATP8P03928 68 aa6.86□□□□□ -1.31
CMTM4-203ENST00000561680 HIST1H4AP62805 103 aaKnown RBP6.86□□□□□ -1.31
CMTM4-203ENST00000561680 TMEM254Q8TBM7 123 aa6.86□□□□□ -1.31
CMTM4-203ENST00000561680 C20orf166-AS1Q96NR2 134 aa6.85□□□□□ -1.31
CMTM4-203ENST00000561680 A8MUU9 505 aa6.84□□□□□ -1.31
CMTM4-203ENST00000561680 CASC2Q6XLA1 102 aa6.84□□□□□ -1.31
CMTM4-203ENST00000561680 Q75L30 129 aa6.84□□□□□ -1.31
CMTM4-203ENST00000561680 WFDC13Q8IUB5 93 aa6.84□□□□□ -1.31
CMTM4-203ENST00000561680 LRP2P98164 4655 aa6.83□□□□□ -1.32
CMTM4-203ENST00000561680 A0A087WVE0 104 aa6.83□□□□□ -1.32
CMTM4-203ENST00000561680 MRPL34Q9BQ48 92 aaKnown RBP6.83□□□□□ -1.32
CMTM4-203ENST00000561680 RPL37P61927 97 aaKnown RBP6.82□□□□□ -1.32
CMTM4-203ENST00000561680 Q8N9P0 234 aaPredicted RBP6.82□□□□□ -1.32
CMTM4-203ENST00000561680 IMUPQ9GZP8 106 aa6.82□□□□□ -1.32
CMTM4-203ENST00000561680 NDUFS5O43920 106 aa6.75□□□□□ -1.33
CMTM4-203ENST00000561680 SEC61BP60468 96 aaKnown RBP6.75□□□□□ -1.33
CMTM4-203ENST00000561680 MUC17Q685J3 4493 aa6.75□□□□□ -1.33
CMTM4-203ENST00000561680 PCOTHQ58A44 107 aa6.72□□□□□ -1.33
CMTM4-203ENST00000561680 ATP11AUNQ6ZP68 121 aa6.72□□□□□ -1.33
CMTM4-203ENST00000561680 ZCCHC13Q8WW36 166 aaKnown RBP6.71□□□□□ -1.34
CMTM4-203ENST00000561680 FAM236AA0A1B0GUQ0 79 aa6.7□□□□□ -1.34
CMTM4-203ENST00000561680 FAM236BA0A1B0GV22 79 aa6.7□□□□□ -1.34
CMTM4-203ENST00000561680 TP53AIP1Q9HCN2 124 aa6.7□□□□□ -1.34
CMTM4-203ENST00000561680 Q5W150 140 aa6.66□□□□□ -1.34
CMTM4-203ENST00000561680 OCR1Q9BZK8 76 aa6.66□□□□□ -1.34
CMTM4-203ENST00000561680 SCGB1A1P11684 91 aa6.65□□□□□ -1.34
CMTM4-203ENST00000561680 UQCRQO14949 82 aa6.64□□□□□ -1.35
CMTM4-203ENST00000561680 UBR4Q5T4S7 5183 aa6.63□□□□□ -1.35
CMTM4-203ENST00000561680 LCE2CQ5TA81 110 aa6.63□□□□□ -1.35
CMTM4-203ENST00000561680 TRAV22A0A0B4J277 110 aa6.62□□□□□ -1.35
CMTM4-203ENST00000561680 KRTAP4-1Q9BYQ7 146 aa6.62□□□□□ -1.35
CMTM4-203ENST00000561680 ATOX1O00244 68 aa6.61□□□□□ -1.35
CMTM4-203ENST00000561680 SMIM20Q8N5G0 67 aa6.6□□□□□ -1.35
CMTM4-203ENST00000561680 RNF213Q63HN8 5207 aa6.59□□□□□ -1.36
CMTM4-203ENST00000561680 TRAV7A0A075B6U4 112 aa6.57□□□□□ -1.36
CMTM4-203ENST00000561680 H0Y9P7 68 aa6.57□□□□□ -1.36
CMTM4-203ENST00000561680 LCE2AQ5TA79 106 aaPredicted RBP6.56□□□□□ -1.36
CMTM4-203ENST00000561680 IGKV2-30P06310 120 aa6.55□□□□□ -1.36
CMTM4-203ENST00000561680 SPINK7P58062 85 aa6.55□□□□□ -1.36
CMTM4-203ENST00000561680 C5orf47Q569G3 176 aa6.55□□□□□ -1.36
CMTM4-203ENST00000561680 C7orf65Q6ZTY9 151 aa6.55□□□□□ -1.36
CMTM4-203ENST00000561680 IGKV2D-30A0A075B6S6 120 aa6.54□□□□□ -1.36
CMTM4-203ENST00000561680 MP68P56378 58 aa6.53□□□□□ -1.36
CMTM4-203ENST00000561680 LOC101927531A0A1B0GV80 90 aa6.52□□□□□ -1.37
CMTM4-203ENST00000561680 SERP2Q8N6R1 65 aa6.52□□□□□ -1.37
CMTM4-203ENST00000561680 H3BPC8 53 aa6.5□□□□□ -1.37
CMTM4-203ENST00000561680 HRES1P13985 223 aa6.5□□□□□ -1.37
CMTM4-203ENST00000561680 C1orf64Q8NEQ6 169 aa6.5□□□□□ -1.37
CMTM4-203ENST00000561680 LINC00208Q96KT6 92 aa6.49□□□□□ -1.37
CMTM4-203ENST00000561680 CYP4F30PQ9H0H9 118 aa6.49□□□□□ -1.37
CMTM4-203ENST00000561680 MUC2Q02817 5179 aa6.49□□□□□ -1.37
CMTM4-203ENST00000561680 MPLKIPQ8TAP9 179 aa6.47□□□□□ -1.37
CMTM4-203ENST00000561680 LORP23490 312 aaPredicted RBP6.46□□□□□ -1.38
CMTM4-203ENST00000561680 A0A0U1RQV1 116 aa6.44□□□□□ -1.38
CMTM4-203ENST00000561680 COX7CP15954 63 aa6.44□□□□□ -1.38
CMTM4-203ENST00000561680 ANAPC13Q9BS18 74 aa6.44□□□□□ -1.38
CMTM4-203ENST00000561680 KRTAP19-2Q3LHN2 52 aa6.43□□□□□ -1.38
CMTM4-203ENST00000561680 KLKP1Q107X0 134 aa6.41□□□□□ -1.38
CMTM4-203ENST00000561680 C20orf197Q8N268 126 aa6.41□□□□□ -1.38
CMTM4-203ENST00000561680 RBM12B-AS1Q9P1G2 102 aa6.41□□□□□ -1.38
CMTM4-203ENST00000561680 SNURFQ9Y675 71 aa6.39□□□□□ -1.39
CMTM4-203ENST00000561680 C4orf26Q17RF5 130 aa6.38□□□□□ -1.39
CMTM4-203ENST00000561680 FAM236DA0A1B0GTK5 79 aa6.36□□□□□ -1.39
CMTM4-203ENST00000561680 FAM236CP0DP71 79 aa6.36□□□□□ -1.39
CMTM4-203ENST00000561680 COX6B2Q6YFQ2 88 aa6.36□□□□□ -1.39
CMTM4-203ENST00000561680 FLGP20930 4061 aaPredicted RBP6.33□□□□□ -1.4
CMTM4-203ENST00000561680 CCDC179H3BU77 68 aa6.31□□□□□ -1.4
CMTM4-203ENST00000561680 KRTAP3-1Q9BYR8 98 aa6.31□□□□□ -1.4
CMTM4-203ENST00000561680 FAT4Q6V0I7 4981 aa6.3□□□□□ -1.4
CMTM4-203ENST00000561680 PCP4P48539 62 aa6.29□□□□□ -1.4
CMTM4-203ENST00000561680 CYSTM1Q9H1C7 97 aa6.29□□□□□ -1.4
CMTM4-203ENST00000561680 H1FX-AS1Q4G0G2 97 aa6.28□□□□□ -1.4
CMTM4-203ENST00000561680 NDUFC1O43677 76 aa6.27□□□□□ -1.41
CMTM4-203ENST00000561680 A8MUN3 132 aa6.26□□□□□ -1.41
CMTM4-203ENST00000561680 H7BZZ5 65 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms