RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	MUC4	Q99102	2169 aa		2.32	□□□□□ -2.04
LRRC28-222	ENST00000561431	TEX49	A0A1B0GTD5	131 aa		2.32	□□□□□ -2.04
LRRC28-222	ENST00000561431	TRBV6-4	A0A1B0GX49	114 aa		2.32	□□□□□ -2.04
LRRC28-222	ENST00000561431		H3BVH4	76 aa		2.32	□□□□□ -2.04
LRRC28-222	ENST00000561431	IGHV3-33	P01772	117 aa		2.32	□□□□□ -2.04
LRRC28-222	ENST00000561431	ARMS2	P0C7Q2	107 aa		2.32	□□□□□ -2.04
LRRC28-222	ENST00000561431	KRTAP25-1	Q3LHN0	102 aa		2.32	□□□□□ -2.04
LRRC28-222	ENST00000561431		Q6JHZ5	121 aa		2.32	□□□□□ -2.04
LRRC28-222	ENST00000561431	C20orf197	Q8N268	126 aa		2.32	□□□□□ -2.04
LRRC28-222	ENST00000561431	IFI27L1	Q96BM0	104 aa		2.32	□□□□□ -2.04
LRRC28-222	ENST00000561431	DNAH11	Q96DT5	4516 aa		2.31	□□□□□ -2.04
LRRC28-222	ENST00000561431	PCLO	Q9Y6V0	5065 aa		2.31	□□□□□ -2.04
LRRC28-222	ENST00000561431	TMSB15B	A0A087X1C1	80 aa		2.31	□□□□□ -2.04
LRRC28-222	ENST00000561431		F8WEM9	126 aa		2.31	□□□□□ -2.04
LRRC28-222	ENST00000561431	CHKB-CPT1B	H3BT56	60 aa		2.31	□□□□□ -2.04
LRRC28-222	ENST00000561431	PSCA	O43653	123 aa		2.31	□□□□□ -2.04
LRRC28-222	ENST00000561431	ATP5EP2	Q5VTU8	51 aa		2.31	□□□□□ -2.04
LRRC28-222	ENST00000561431	DMAC1	Q96GE9	116 aa		2.31	□□□□□ -2.04
LRRC28-222	ENST00000561431	TXNDC17	Q9BRA2	123 aa		2.31	□□□□□ -2.04
LRRC28-222	ENST00000561431	GNG13	Q9P2W3	67 aa		2.31	□□□□□ -2.04
LRRC28-222	ENST00000561431		A0A087WTM6	91 aa		2.3	□□□□□ -2.04
LRRC28-222	ENST00000561431	ELOF1	P60002	83 aa	Known RBP	2.3	□□□□□ -2.04
LRRC28-222	ENST00000561431	LINC01556	Q5JQF7	62 aa		2.3	□□□□□ -2.04
LRRC28-222	ENST00000561431	C1orf137	Q5JT78	98 aa		2.3	□□□□□ -2.04
LRRC28-222	ENST00000561431	LELP1	Q5T871	98 aa		2.3	□□□□□ -2.04
LRRC28-222	ENST00000561431	BAGE2	Q86Y30	109 aa		2.3	□□□□□ -2.04
LRRC28-222	ENST00000561431	PSORS1C2	Q9UIG4	136 aa		2.3	□□□□□ -2.04
LRRC28-222	ENST00000561431	DYNC1H1	Q14204	4646 aa	Known RBP	2.3	□□□□□ -2.04
LRRC28-222	ENST00000561431	ABCA13	Q86UQ4	5058 aa		2.29	□□□□□ -2.04
LRRC28-222	ENST00000561431	LRCOL1	A6NCL2	159 aa		2.29	□□□□□ -2.04
LRRC28-222	ENST00000561431	ZNF815P	A8K554	130 aa		2.29	□□□□□ -2.04
LRRC28-222	ENST00000561431	HIGD1C	A8MV81	97 aa		2.29	□□□□□ -2.04
LRRC28-222	ENST00000561431	FAM74A4	Q5TZK3	123 aa		2.29	□□□□□ -2.04
LRRC28-222	ENST00000561431	C9orf163	Q8N9P6	203 aa		2.29	□□□□□ -2.04
LRRC28-222	ENST00000561431		Q9BRP9	147 aa		2.29	□□□□□ -2.04
LRRC28-222	ENST00000561431	HIGD2A	Q9BW72	106 aa		2.29	□□□□□ -2.04
LRRC28-222	ENST00000561431	RYR1	P21817	5038 aa		2.29	□□□□□ -2.04
LRRC28-222	ENST00000561431	TRBV6-8	A0A0A6YYG3	113 aa		2.28	□□□□□ -2.04
LRRC28-222	ENST00000561431	IGHV3-30	P01768	117 aa		2.28	□□□□□ -2.04
LRRC28-222	ENST00000561431	IGHV3-30-5	P0DP03	117 aa		2.28	□□□□□ -2.04
LRRC28-222	ENST00000561431	CNFN	Q9BYD5	112 aa		2.28	□□□□□ -2.04
LRRC28-222	ENST00000561431	PRO2289	Q9P1D8	64 aa		2.28	□□□□□ -2.04
LRRC28-222	ENST00000561431	UBE2D4	Q9Y2X8	147 aa		2.28	□□□□□ -2.04
LRRC28-222	ENST00000561431	APOB	P04114	4563 aa	Known RBP	2.27	□□□□□ -2.05
LRRC28-222	ENST00000561431		M0QY20	66 aa		2.27	□□□□□ -2.05
LRRC28-222	ENST00000561431	IFI27	P40305	119 aa	Predicted RBP	2.27	□□□□□ -2.05
LRRC28-222	ENST00000561431	CNBP	P62633	177 aa	Known RBP	2.27	□□□□□ -2.05
LRRC28-222	ENST00000561431	CSAG1	Q6PB30	78 aa		2.27	□□□□□ -2.05
LRRC28-222	ENST00000561431	SFTA2	Q6UW10	78 aa		2.27	□□□□□ -2.05
LRRC28-222	ENST00000561431	BAGE3	Q86Y29	109 aa		2.27	□□□□□ -2.05
LRRC28-222	ENST00000561431	HSPG2	P98160	4391 aa		2.27	□□□□□ -2.05
LRRC28-222	ENST00000561431	LRP1B	Q9NZR2	4599 aa		2.27	□□□□□ -2.05
LRRC28-222	ENST00000561431	DNAH5	Q8TE73	4624 aa		2.26	□□□□□ -2.05
LRRC28-222	ENST00000561431	SPINT4	Q6UDR6	99 aa		2.26	□□□□□ -2.05
LRRC28-222	ENST00000561431	ENHO	Q6UWT2	76 aa		2.26	□□□□□ -2.05
LRRC28-222	ENST00000561431	AMELX	Q99217	191 aa		2.26	□□□□□ -2.05
LRRC28-222	ENST00000561431	SRRM2	Q9UQ35	2752 aa	Known RBP	2.25	□□□□□ -2.05
LRRC28-222	ENST00000561431	MGP	P08493	103 aa		2.25	□□□□□ -2.05
LRRC28-222	ENST00000561431	HAMP	P81172	84 aa		2.25	□□□□□ -2.05
LRRC28-222	ENST00000561431		Q6ZSA8	131 aa		2.25	□□□□□ -2.05
LRRC28-222	ENST00000561431		V9GYV3	84 aa		2.25	□□□□□ -2.05
LRRC28-222	ENST00000561431	DEFB104A	Q8WTQ1	72 aa		2.24	□□□□□ -2.05
LRRC28-222	ENST00000561431	RPL39L	Q96EH5	51 aa	Known RBP	2.24	□□□□□ -2.05
LRRC28-222	ENST00000561431	ORMDL1	Q9P0S3	153 aa		2.24	□□□□□ -2.05
LRRC28-222	ENST00000561431		R4GN34	69 aa		2.24	□□□□□ -2.05
LRRC28-222	ENST00000561431	TRBV7-4	A0A0J9YYF1	115 aa		2.23	□□□□□ -2.05
LRRC28-222	ENST00000561431	TRBV6-5	A0A0K0K1A5	114 aa		2.23	□□□□□ -2.05
LRRC28-222	ENST00000561431		A0A1B0GUT8	65 aa		2.23	□□□□□ -2.05
LRRC28-222	ENST00000561431	ANG	P03950	147 aa	Known RBP	2.23	□□□□□ -2.05
LRRC28-222	ENST00000561431		Q5VSD8	79 aa		2.23	□□□□□ -2.05
LRRC28-222	ENST00000561431	CLPSL2	Q6UWE3	100 aa		2.23	□□□□□ -2.05
LRRC28-222	ENST00000561431	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	2.22	□□□□□ -2.05
LRRC28-222	ENST00000561431	SMIM27	A0A1W2PRY6	76 aa		2.22	□□□□□ -2.05
LRRC28-222	ENST00000561431	IGKV2-29	A2NJV5	120 aa	Predicted RBP	2.22	□□□□□ -2.05
LRRC28-222	ENST00000561431	SMR3B	P02814	79 aa	Predicted RBP	2.22	□□□□□ -2.05
LRRC28-222	ENST00000561431	POLR2K	P53803	58 aa	Known RBP	2.22	□□□□□ -2.05
LRRC28-222	ENST00000561431	KRTAP10-4	P60372	401 aa	Predicted RBP	2.22	□□□□□ -2.05
LRRC28-222	ENST00000561431	ATXN8	Q156A1	80 aa		2.22	□□□□□ -2.05
LRRC28-222	ENST00000561431	IGFL1	Q6UW32	110 aa		2.22	□□□□□ -2.05
LRRC28-222	ENST00000561431		I3L3M4	83 aa		2.21	□□□□□ -2.06
LRRC28-222	ENST00000561431	LEPROTL1	O95214	131 aa		2.21	□□□□□ -2.06
LRRC28-222	ENST00000561431	PPP1R17	O96001	155 aa		2.21	□□□□□ -2.06
LRRC28-222	ENST00000561431	MYCBP2	O75592	4640 aa		2.21	□□□□□ -2.06
LRRC28-222	ENST00000561431	VPS13B	Q7Z7G8	4022 aa		2.2	□□□□□ -2.06
LRRC28-222	ENST00000561431		D6R8Y8	96 aa		2.2	□□□□□ -2.06
LRRC28-222	ENST00000561431	PDE6G	P18545	87 aa		2.2	□□□□□ -2.06
LRRC28-222	ENST00000561431	SPAG11B	Q08648	103 aa		2.2	□□□□□ -2.06
LRRC28-222	ENST00000561431	SPAG11A	Q6PDA7	123 aa		2.2	□□□□□ -2.06
LRRC28-222	ENST00000561431	MUSTN1	Q8IVN3	82 aa		2.2	□□□□□ -2.06
LRRC28-222	ENST00000561431	PRR15L	Q9BU68	103 aa		2.2	□□□□□ -2.06
LRRC28-222	ENST00000561431	FAT1	Q14517	4588 aa		2.2	□□□□□ -2.06
LRRC28-222	ENST00000561431	GVQW2	A0A096LPI5	108 aa	Predicted RBP	2.19	□□□□□ -2.06
LRRC28-222	ENST00000561431	LINC00959	A0A1B0GUT2	108 aa		2.19	□□□□□ -2.06
LRRC28-222	ENST00000561431	SMIM2	Q9BVW6	85 aa		2.19	□□□□□ -2.06
LRRC28-222	ENST00000561431	PLAC8	Q9NZF1	115 aa		2.19	□□□□□ -2.06
LRRC28-222	ENST00000561431	DNAH8	Q96JB1	4490 aa		2.19	□□□□□ -2.06
LRRC28-222	ENST00000561431	IGKV3OR2-268	A0A0C4DH90	116 aa		2.18	□□□□□ -2.06
LRRC28-222	ENST00000561431	FCER1G	P30273	86 aa		2.18	□□□□□ -2.06
LRRC28-222	ENST00000561431	RPL39	P62891	51 aa	Known RBP	2.18	□□□□□ -2.06
LRRC28-222	ENST00000561431	SPACA4	Q8TDM5	124 aa		2.18	□□□□□ -2.06

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