RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 A0A1B0GW54 56 aa5.93□□□□□ -1.46
TPM1-227ENST00000560970 CD164Q04900 197 aa5.93□□□□□ -1.46
TPM1-227ENST00000560970 LINC00846Q9NV44 126 aa5.93□□□□□ -1.46
TPM1-227ENST00000560970 MT-ATP8P03928 68 aa5.92□□□□□ -1.46
TPM1-227ENST00000560970 SCGB1A1P11684 91 aa5.92□□□□□ -1.46
TPM1-227ENST00000560970 LIMD2Q9BT23 127 aa5.92□□□□□ -1.46
TPM1-227ENST00000560970 ATP5EP2Q5VTU8 51 aa5.91□□□□□ -1.46
TPM1-227ENST00000560970 Q6JHZ5 121 aa5.91□□□□□ -1.46
TPM1-227ENST00000560970 IGFL1Q6UW32 110 aa5.91□□□□□ -1.46
TPM1-227ENST00000560970 UBL5Q9BZL1 73 aa5.91□□□□□ -1.46
TPM1-227ENST00000560970 TRBV7-7A0A0K0K1E9 115 aa5.9□□□□□ -1.46
TPM1-227ENST00000560970 PCP4P48539 62 aa5.9□□□□□ -1.46
TPM1-227ENST00000560970 Q6Q795 121 aa5.9□□□□□ -1.46
TPM1-227ENST00000560970 IMUPQ9GZP8 106 aa5.9□□□□□ -1.46
TPM1-227ENST00000560970 CRCT1Q9UGL9 99 aa5.9□□□□□ -1.46
TPM1-227ENST00000560970 Q5XG85 94 aa5.89□□□□□ -1.47
TPM1-227ENST00000560970 C1orf195Q5TG92 126 aa5.86□□□□□ -1.47
TPM1-227ENST00000560970 Q6ZVQ6 151 aa5.86□□□□□ -1.47
TPM1-227ENST00000560970 A0A1W2PNM2 257 aa5.85□□□□□ -1.47
TPM1-227ENST00000560970 KRTAP19-2Q3LHN2 52 aa5.85□□□□□ -1.47
TPM1-227ENST00000560970 MT1HP80294 61 aa5.84□□□□□ -1.47
TPM1-227ENST00000560970 CXCL6P80162 114 aa5.83□□□□□ -1.48
TPM1-227ENST00000560970 C9orf92A6NGG3 77 aa5.82□□□□□ -1.48
TPM1-227ENST00000560970 PCOTHQ58A44 107 aa5.82□□□□□ -1.48
TPM1-227ENST00000560970 IGKV3D-7A0A0C4DH55 119 aa5.81□□□□□ -1.48
TPM1-227ENST00000560970 NREPQ16612 68 aa5.81□□□□□ -1.48
TPM1-227ENST00000560970 A0A087WSZ3 146 aa5.77□□□□□ -1.49
TPM1-227ENST00000560970 FAM236AA0A1B0GUQ0 79 aa5.76□□□□□ -1.49
TPM1-227ENST00000560970 FAM236BA0A1B0GV22 79 aa5.76□□□□□ -1.49
TPM1-227ENST00000560970 BPY2O14599 106 aa5.76□□□□□ -1.49
TPM1-227ENST00000560970 KRTAP10-6P60371 365 aaPredicted RBP5.76□□□□□ -1.49
TPM1-227ENST00000560970 HIST1H4AP62805 103 aaKnown RBP5.76□□□□□ -1.49
TPM1-227ENST00000560970 Q96NJ1 140 aa5.75□□□□□ -1.49
TPM1-227ENST00000560970 SS18L2Q9UHA2 77 aa5.74□□□□□ -1.49
TPM1-227ENST00000560970 FLGP20930 4061 aaPredicted RBP5.73□□□□□ -1.49
TPM1-227ENST00000560970 ANAPC13Q9BS18 74 aa5.73□□□□□ -1.49
TPM1-227ENST00000560970 A0A087WVE0 104 aa5.72□□□□□ -1.49
TPM1-227ENST00000560970 ATOX1O00244 68 aa5.72□□□□□ -1.49
TPM1-227ENST00000560970 RPL37P61927 97 aaKnown RBP5.72□□□□□ -1.49
TPM1-227ENST00000560970 M0R2T5 61 aa5.71□□□□□ -1.5
TPM1-227ENST00000560970 IGKV4-1P06312 121 aa5.71□□□□□ -1.5
TPM1-227ENST00000560970 COX6B2Q6YFQ2 88 aa5.71□□□□□ -1.5
TPM1-227ENST00000560970 J3KT08 172 aa5.7□□□□□ -1.5
TPM1-227ENST00000560970 DSCR10P59022 87 aa5.69□□□□□ -1.5
TPM1-227ENST00000560970 LINC00472Q9H8W2 130 aa5.69□□□□□ -1.5
TPM1-227ENST00000560970 SMIM20Q8N5G0 67 aa5.66□□□□□ -1.5
TPM1-227ENST00000560970 Q8N9L7 120 aa5.66□□□□□ -1.5
TPM1-227ENST00000560970 A8MWP4 228 aa5.65□□□□□ -1.5
TPM1-227ENST00000560970 K7EQZ3 153 aa5.65□□□□□ -1.5
TPM1-227ENST00000560970 DEFB116Q30KQ4 102 aa5.65□□□□□ -1.5
TPM1-227ENST00000560970 Q75L30 129 aa5.63□□□□□ -1.51
TPM1-227ENST00000560970 SERP2Q8N6R1 65 aa5.63□□□□□ -1.51
TPM1-227ENST00000560970 UQCRQO14949 82 aa5.62□□□□□ -1.51
TPM1-227ENST00000560970 NDUFB1O75438 58 aa5.62□□□□□ -1.51
TPM1-227ENST00000560970 PRR15Q8IV56 129 aa5.62□□□□□ -1.51
TPM1-227ENST00000560970 TRAV7A0A075B6U4 112 aa5.61□□□□□ -1.51
TPM1-227ENST00000560970 KRTAP23-1A1A580 65 aa5.61□□□□□ -1.51
TPM1-227ENST00000560970 HCG22E2RYF7 251 aa5.61□□□□□ -1.51
TPM1-227ENST00000560970 COX7CP15954 63 aa5.61□□□□□ -1.51
TPM1-227ENST00000560970 NOTCH2NLQ7Z3S9 236 aa5.61□□□□□ -1.51
TPM1-227ENST00000560970 C20orf166-AS1Q96NR2 134 aa5.61□□□□□ -1.51
TPM1-227ENST00000560970 KRTAP16-1A8MUX0 517 aa5.6□□□□□ -1.51
TPM1-227ENST00000560970 A8MUU9 505 aa5.59□□□□□ -1.51
TPM1-227ENST00000560970 IGHV6-1A0A0B4J1U7 121 aa5.57□□□□□ -1.52
TPM1-227ENST00000560970 A0A1B0GVX0 72 aa5.57□□□□□ -1.52
TPM1-227ENST00000560970 CCDC179H3BU77 68 aa5.57□□□□□ -1.52
TPM1-227ENST00000560970 LINC00313P59037 77 aa5.57□□□□□ -1.52
TPM1-227ENST00000560970 CASC2Q6XLA1 102 aa5.56□□□□□ -1.52
TPM1-227ENST00000560970 OCR1Q9BZK8 76 aa5.56□□□□□ -1.52
TPM1-227ENST00000560970 MMP24-AS1A0A0U1RRL7 71 aa5.55□□□□□ -1.52
TPM1-227ENST00000560970 ATP11AUNQ6ZP68 121 aa5.54□□□□□ -1.52
TPM1-227ENST00000560970 WFDC13Q8IUB5 93 aa5.54□□□□□ -1.52
TPM1-227ENST00000560970 C8orf17Q9NRJ1 99 aa5.54□□□□□ -1.52
TPM1-227ENST00000560970 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.53□□□□□ -1.52
TPM1-227ENST00000560970 C8orf87E5RJ46 101 aa5.53□□□□□ -1.52
TPM1-227ENST00000560970 hDV103S1A0JD37 113 aa5.52□□□□□ -1.53
TPM1-227ENST00000560970 KRTAP9-7A8MTY7 169 aa5.52□□□□□ -1.53
TPM1-227ENST00000560970 TMEM254Q8TBM7 123 aa5.51□□□□□ -1.53
TPM1-227ENST00000560970 KLKP1Q107X0 134 aa5.49□□□□□ -1.53
TPM1-227ENST00000560970 C20orf197Q8N268 126 aa5.49□□□□□ -1.53
TPM1-227ENST00000560970 C5orf47Q569G3 176 aa5.48□□□□□ -1.53
TPM1-227ENST00000560970 MRPL34Q9BQ48 92 aaKnown RBP5.48□□□□□ -1.53
TPM1-227ENST00000560970 TP53AIP1Q9HCN2 124 aa5.48□□□□□ -1.53
TPM1-227ENST00000560970 KRTAP9-8Q9BYQ0 159 aa5.47□□□□□ -1.53
TPM1-227ENST00000560970 SSPOA2VEC9 5147 aa5.47□□□□□ -1.53
TPM1-227ENST00000560970 USH2AO75445 5202 aa5.45□□□□□ -1.54
TPM1-227ENST00000560970 NDUFC1O43677 76 aa5.45□□□□□ -1.54
TPM1-227ENST00000560970 H3BPC8 53 aa5.44□□□□□ -1.54
TPM1-227ENST00000560970 MP68P56378 58 aa5.44□□□□□ -1.54
TPM1-227ENST00000560970 Q8N9P0 234 aaPredicted RBP5.44□□□□□ -1.54
TPM1-227ENST00000560970 TMEM258P61165 79 aa5.42□□□□□ -1.54
TPM1-227ENST00000560970 ZCCHC13Q8WW36 166 aaKnown RBP5.42□□□□□ -1.54
TPM1-227ENST00000560970 CYSTM1Q9H1C7 97 aa5.42□□□□□ -1.54
TPM1-227ENST00000560970 SNURFQ9Y675 71 aa5.42□□□□□ -1.54
TPM1-227ENST00000560970 A0A0A0MQY5 61 aa5.41□□□□□ -1.54
TPM1-227ENST00000560970 TRAV22A0A0B4J277 110 aa5.41□□□□□ -1.54
TPM1-227ENST00000560970 H0Y9P7 68 aa5.41□□□□□ -1.54
TPM1-227ENST00000560970 NDUFS5O43920 106 aa5.41□□□□□ -1.54
TPM1-227ENST00000560970 HRES1P13985 223 aa5.4□□□□□ -1.54
TPM1-227ENST00000560970 H7BZZ5 65 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms