RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 HSD52Q0P140 79 aa5.65□□□□□ -1.5
GABPB1-210ENST00000560825 IGKV4-1P06312 121 aa5.65□□□□□ -1.51
GABPB1-210ENST00000560825 LINC00472Q9H8W2 130 aa5.65□□□□□ -1.51
GABPB1-210ENST00000560825 PSMB2P49721 201 aa5.64□□□□□ -1.51
GABPB1-210ENST00000560825 ANKRD29Q8N6D5 301 aa5.64□□□□□ -1.51
GABPB1-210ENST00000560825 ORMDL1Q9P0S3 153 aa5.64□□□□□ -1.51
GABPB1-210ENST00000560825 TRBV7-4A0A0J9YYF1 115 aa5.63□□□□□ -1.51
GABPB1-210ENST00000560825 SNCGO76070 127 aa5.63□□□□□ -1.51
GABPB1-210ENST00000560825 CCKP06307 115 aa5.61□□□□□ -1.51
GABPB1-210ENST00000560825 HRES1P13985 223 aa5.61□□□□□ -1.51
GABPB1-210ENST00000560825 LINC00313P59037 77 aa5.61□□□□□ -1.51
GABPB1-210ENST00000560825 DNAL4O96015 105 aa5.6□□□□□ -1.51
GABPB1-210ENST00000560825 MPLKIPQ8TAP9 179 aa5.6□□□□□ -1.51
GABPB1-210ENST00000560825 IGHV6-1A0A0B4J1U7 121 aa5.59□□□□□ -1.51
GABPB1-210ENST00000560825 MT2AP02795 61 aa5.59□□□□□ -1.51
GABPB1-210ENST00000560825 TMEM256-PLSCR3K7ERE1 68 aa5.58□□□□□ -1.52
GABPB1-210ENST00000560825 NAA38Q9BRA0 125 aaKnown RBP5.58□□□□□ -1.52
GABPB1-210ENST00000560825 UQCR10Q9UDW1 63 aa5.58□□□□□ -1.52
GABPB1-210ENST00000560825 VPS25Q9BRG1 176 aa5.57□□□□□ -1.52
GABPB1-210ENST00000560825 TRACP01848 142 aa5.57□□□□□ -1.52
GABPB1-210ENST00000560825 MT1FP04733 61 aa5.57□□□□□ -1.52
GABPB1-210ENST00000560825 UBE2V1Q13404 147 aa5.57□□□□□ -1.52
GABPB1-210ENST00000560825 COX6CP09669 75 aa5.54□□□□□ -1.52
GABPB1-210ENST00000560825 TRBV20-1A0A075B6N2 111 aa5.53□□□□□ -1.52
GABPB1-210ENST00000560825 A0A1B0GVX0 72 aa5.53□□□□□ -1.52
GABPB1-210ENST00000560825 BAALC-AS2P0C853 105 aa5.52□□□□□ -1.53
GABPB1-210ENST00000560825 SCGB1C2P0DMR2 95 aa5.52□□□□□ -1.53
GABPB1-210ENST00000560825 RBM3P98179 157 aaKnown RBP5.52□□□□□ -1.53
GABPB1-210ENST00000560825 FAM236DA0A1B0GTK5 79 aa5.49□□□□□ -1.53
GABPB1-210ENST00000560825 H3BQ85 93 aa5.49□□□□□ -1.53
GABPB1-210ENST00000560825 FAM236CP0DP71 79 aa5.49□□□□□ -1.53
GABPB1-210ENST00000560825 Q6ZQT0 140 aa5.49□□□□□ -1.53
GABPB1-210ENST00000560825 DSCR8Q96T75 97 aa5.48□□□□□ -1.53
GABPB1-210ENST00000560825 FCGBPQ9Y6R7 5405 aaPredicted RBP5.48□□□□□ -1.53
GABPB1-210ENST00000560825 C9JAW5 83 aa5.47□□□□□ -1.53
GABPB1-210ENST00000560825 ZCCHC13Q8WW36 166 aaKnown RBP5.47□□□□□ -1.53
GABPB1-210ENST00000560825 IGKV3D-7A0A0C4DH55 119 aa5.46□□□□□ -1.54
GABPB1-210ENST00000560825 C8orf87E5RJ46 101 aa5.46□□□□□ -1.54
GABPB1-210ENST00000560825 SPINK7P58062 85 aa5.45□□□□□ -1.54
GABPB1-210ENST00000560825 RBM12B-AS1Q9P1G2 102 aa5.45□□□□□ -1.54
GABPB1-210ENST00000560825 Q8N9P0 234 aaPredicted RBP5.44□□□□□ -1.54
GABPB1-210ENST00000560825 C14orf132Q9NPU4 83 aa5.44□□□□□ -1.54
GABPB1-210ENST00000560825 LOC110117498A0A087WWA1 95 aa5.43□□□□□ -1.54
GABPB1-210ENST00000560825 KRTAP10-10P60014 251 aa5.43□□□□□ -1.54
GABPB1-210ENST00000560825 C8orf17Q9NRJ1 99 aa5.43□□□□□ -1.54
GABPB1-210ENST00000560825 ATXN8Q156A1 80 aa5.42□□□□□ -1.54
GABPB1-210ENST00000560825 A8MWP4 228 aa5.4□□□□□ -1.54
GABPB1-210ENST00000560825 J3KT08 172 aa5.4□□□□□ -1.55
GABPB1-210ENST00000560825 MTURNQ8N3F0 131 aa5.4□□□□□ -1.55
GABPB1-210ENST00000560825 WFDC13Q8IUB5 93 aa5.39□□□□□ -1.55
GABPB1-210ENST00000560825 MMP24-AS1A0A0U1RRL7 71 aa5.38□□□□□ -1.55
GABPB1-210ENST00000560825 M0R143 59 aa5.38□□□□□ -1.55
GABPB1-210ENST00000560825 JMJD7-PLA2G4BH0Y9G9 81 aa5.37□□□□□ -1.55
GABPB1-210ENST00000560825 BATFQ16520 125 aa5.37□□□□□ -1.55
GABPB1-210ENST00000560825 Q6ZVQ6 151 aa5.37□□□□□ -1.55
GABPB1-210ENST00000560825 PRR15Q8IV56 129 aa5.36□□□□□ -1.55
GABPB1-210ENST00000560825 NDUFB1O75438 58 aa5.35□□□□□ -1.55
GABPB1-210ENST00000560825 K7EQZ3 153 aa5.34□□□□□ -1.55
GABPB1-210ENST00000560825 SMIM6P0DI80 62 aa5.34□□□□□ -1.55
GABPB1-210ENST00000560825 TAX1BP3O14907 124 aa5.33□□□□□ -1.56
GABPB1-210ENST00000560825 Q5W150 140 aa5.33□□□□□ -1.56
GABPB1-210ENST00000560825 MACF1Q9UPN3 7388 aaKnown RBP5.33□□□□□ -1.56
GABPB1-210ENST00000560825 LYRM7Q5U5X0 104 aa5.32□□□□□ -1.56
GABPB1-210ENST00000560825 C9orf118A6NHY6 69 aa5.31□□□□□ -1.56
GABPB1-210ENST00000560825 NREPQ16612 68 aa5.31□□□□□ -1.56
GABPB1-210ENST00000560825 LOC105371267A0A1B0GV96 52 aa5.31□□□□□ -1.56
GABPB1-210ENST00000560825 A0A1B0GW54 56 aa5.31□□□□□ -1.56
GABPB1-210ENST00000560825 Q8N9L7 120 aa5.31□□□□□ -1.56
GABPB1-210ENST00000560825 MRPL34Q9BQ48 92 aaKnown RBP5.31□□□□□ -1.56
GABPB1-210ENST00000560825 PDE6GP18545 87 aa5.3□□□□□ -1.56
GABPB1-210ENST00000560825 TMEM254Q8TBM7 123 aa5.3□□□□□ -1.56
GABPB1-210ENST00000560825 KRTAP3-1Q9BYR8 98 aa5.29□□□□□ -1.56
GABPB1-210ENST00000560825 A0A1W2PPM0 123 aa5.28□□□□□ -1.56
GABPB1-210ENST00000560825 hDV103S1A0JD37 113 aa5.27□□□□□ -1.57
GABPB1-210ENST00000560825 KRTAP19-6Q3LI70 58 aa5.27□□□□□ -1.57
GABPB1-210ENST00000560825 SYNE2Q8WXH0 6885 aaKnown RBP5.25□□□□□ -1.57
GABPB1-210ENST00000560825 TSTD3H0UI37 97 aa5.25□□□□□ -1.57
GABPB1-210ENST00000560825 NDUFS5O43920 106 aa5.25□□□□□ -1.57
GABPB1-210ENST00000560825 IGKV2D-30A0A075B6S6 120 aa5.24□□□□□ -1.57
GABPB1-210ENST00000560825 H3BT86 120 aa5.24□□□□□ -1.57
GABPB1-210ENST00000560825 BPY2O14599 106 aa5.24□□□□□ -1.57
GABPB1-210ENST00000560825 IGKV2-30P06310 120 aa5.24□□□□□ -1.57
GABPB1-210ENST00000560825 H1FX-AS1Q4G0G2 97 aa5.23□□□□□ -1.57
GABPB1-210ENST00000560825 C4orf26Q17RF5 130 aa5.2□□□□□ -1.58
GABPB1-210ENST00000560825 HCG22E2RYF7 251 aa5.19□□□□□ -1.58
GABPB1-210ENST00000560825 PRO0461Q9UI25 63 aa5.19□□□□□ -1.58
GABPB1-210ENST00000560825 CASC2Q6XLA1 102 aa5.18□□□□□ -1.58
GABPB1-210ENST00000560825 SPCS1Q9Y6A9 102 aa5.18□□□□□ -1.58
GABPB1-210ENST00000560825 C7orf65Q6ZTY9 151 aa5.17□□□□□ -1.58
GABPB1-210ENST00000560825 LINC00846Q9NV44 126 aa5.17□□□□□ -1.58
GABPB1-210ENST00000560825 C5orf47Q569G3 176 aa5.12□□□□□ -1.59
GABPB1-210ENST00000560825 K7EP34 96 aa5.09□□□□□ -1.59
GABPB1-210ENST00000560825 MT1BP07438 61 aa5.08□□□□□ -1.6
GABPB1-210ENST00000560825 CXCL6P80162 114 aa5.08□□□□□ -1.6
GABPB1-210ENST00000560825 LCA10Q71F78 164 aa5.07□□□□□ -1.6
GABPB1-210ENST00000560825 A0A087WVE0 104 aa5.06□□□□□ -1.6
GABPB1-210ENST00000560825 COL5A1-AS1Q5SY13 56 aa5.06□□□□□ -1.6
GABPB1-210ENST00000560825 UBL5Q9BZL1 73 aa5.05□□□□□ -1.6
GABPB1-210ENST00000560825 PCP4P48539 62 aa5.04□□□□□ -1.6
GABPB1-210ENST00000560825 C1orf64Q8NEQ6 169 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms