RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 KRTAP13-3Q3SY46 172 aa6.82□□□□□ -1.32
USP8-209ENST00000560297 Q96NJ1 140 aa6.82□□□□□ -1.32
USP8-209ENST00000560297 LINC00472Q9H8W2 130 aa6.82□□□□□ -1.32
USP8-209ENST00000560297 NREPQ16612 68 aa6.8□□□□□ -1.32
USP8-209ENST00000560297 CDIP1Q9H305 208 aa6.8□□□□□ -1.32
USP8-209ENST00000560297 IGKV4-1P06312 121 aa6.79□□□□□ -1.32
USP8-209ENST00000560297 HMCN2Q8NDA2 5059 aa6.78□□□□□ -1.32
USP8-209ENST00000560297 J3KT08 172 aa6.78□□□□□ -1.32
USP8-209ENST00000560297 DEFB116Q30KQ4 102 aa6.76□□□□□ -1.33
USP8-209ENST00000560297 SIGMAR1Q99720 223 aa6.76□□□□□ -1.33
USP8-209ENST00000560297 C9orf92A6NGG3 77 aa6.74□□□□□ -1.33
USP8-209ENST00000560297 UBL5Q9BZL1 73 aa6.73□□□□□ -1.33
USP8-209ENST00000560297 NDUFB1O75438 58 aa6.72□□□□□ -1.33
USP8-209ENST00000560297 LINC00846Q9NV44 126 aa6.72□□□□□ -1.33
USP8-209ENST00000560297 ACYP1P07311 99 aa6.71□□□□□ -1.34
USP8-209ENST00000560297 Q6ZVQ6 151 aa6.71□□□□□ -1.34
USP8-209ENST00000560297 LINC00313P59037 77 aa6.7□□□□□ -1.34
USP8-209ENST00000560297 A0A1B0GVX0 72 aa6.69□□□□□ -1.34
USP8-209ENST00000560297 A8MWP4 228 aa6.69□□□□□ -1.34
USP8-209ENST00000560297 BPY2O14599 106 aa6.69□□□□□ -1.34
USP8-209ENST00000560297 LPAP08519 4548 aa6.68□□□□□ -1.34
USP8-209ENST00000560297 IGHV6-1A0A0B4J1U7 121 aa6.68□□□□□ -1.34
USP8-209ENST00000560297 FAM240AA0A1B0GVK7 77 aa6.68□□□□□ -1.34
USP8-209ENST00000560297 LRP2P98164 4655 aa6.67□□□□□ -1.34
USP8-209ENST00000560297 C8orf87E5RJ46 101 aa6.67□□□□□ -1.34
USP8-209ENST00000560297 DSCR10P59022 87 aa6.66□□□□□ -1.34
USP8-209ENST00000560297 IGKV3D-7A0A0C4DH55 119 aa6.65□□□□□ -1.34
USP8-209ENST00000560297 J3QR89 54 aa6.65□□□□□ -1.34
USP8-209ENST00000560297 SEC61BP60468 96 aaKnown RBP6.65□□□□□ -1.34
USP8-209ENST00000560297 PRR15Q8IV56 129 aa6.65□□□□□ -1.34
USP8-209ENST00000560297 RPL37P61927 97 aaKnown RBP6.62□□□□□ -1.35
USP8-209ENST00000560297 Q75L30 129 aa6.62□□□□□ -1.35
USP8-209ENST00000560297 NOTCH2NLQ7Z3S9 236 aa6.62□□□□□ -1.35
USP8-209ENST00000560297 KRTAP4-7Q9BYR0 210 aa6.62□□□□□ -1.35
USP8-209ENST00000560297 C20orf166-AS1Q96NR2 134 aa6.61□□□□□ -1.35
USP8-209ENST00000560297 C8orf17Q9NRJ1 99 aa6.61□□□□□ -1.35
USP8-209ENST00000560297 A8MUU9 505 aa6.6□□□□□ -1.35
USP8-209ENST00000560297 K7EQZ3 153 aa6.6□□□□□ -1.35
USP8-209ENST00000560297 CXCL6P80162 114 aa6.6□□□□□ -1.35
USP8-209ENST00000560297 LCE1DQ5T752 114 aa6.6□□□□□ -1.35
USP8-209ENST00000560297 KRTAP16-1A8MUX0 517 aa6.59□□□□□ -1.35
USP8-209ENST00000560297 ATP11AUNQ6ZP68 121 aa6.58□□□□□ -1.36
USP8-209ENST00000560297 PCOTHQ58A44 107 aa6.56□□□□□ -1.36
USP8-209ENST00000560297 ATP5EP2Q5VTU8 51 aa6.56□□□□□ -1.36
USP8-209ENST00000560297 Q8N9L7 120 aa6.56□□□□□ -1.36
USP8-209ENST00000560297 LINC00643Q86TS7 51 aa6.55□□□□□ -1.36
USP8-209ENST00000560297 MMP24-AS1A0A0U1RRL7 71 aa6.54□□□□□ -1.36
USP8-209ENST00000560297 hDV103S1A0JD37 113 aa6.54□□□□□ -1.36
USP8-209ENST00000560297 Q8N9P0 234 aaPredicted RBP6.54□□□□□ -1.36
USP8-209ENST00000560297 TMEM254Q8TBM7 123 aa6.54□□□□□ -1.36
USP8-209ENST00000560297 UBR4Q5T4S7 5183 aa6.53□□□□□ -1.36
USP8-209ENST00000560297 K7ERU9 68 aa6.53□□□□□ -1.36
USP8-209ENST00000560297 MRPL34Q9BQ48 92 aaKnown RBP6.53□□□□□ -1.36
USP8-209ENST00000560297 CASC2Q6XLA1 102 aa6.51□□□□□ -1.37
USP8-209ENST00000560297 HCG22E2RYF7 251 aa6.5□□□□□ -1.37
USP8-209ENST00000560297 WFDC13Q8IUB5 93 aa6.49□□□□□ -1.37
USP8-209ENST00000560297 MUC17Q685J3 4493 aa6.46□□□□□ -1.37
USP8-209ENST00000560297 NDUFS5O43920 106 aa6.46□□□□□ -1.38
USP8-209ENST00000560297 ZCCHC13Q8WW36 166 aaKnown RBP6.46□□□□□ -1.38
USP8-209ENST00000560297 HIST1H4AP62805 103 aaKnown RBP6.45□□□□□ -1.38
USP8-209ENST00000560297 KRTAP4-1Q9BYQ7 146 aa6.45□□□□□ -1.38
USP8-209ENST00000560297 KRTAP4-9Q9BYQ8 210 aa6.43□□□□□ -1.38
USP8-209ENST00000560297 A0A0U1RQV1 116 aa6.41□□□□□ -1.38
USP8-209ENST00000560297 TP53AIP1Q9HCN2 124 aa6.4□□□□□ -1.38
USP8-209ENST00000560297 RNF213Q63HN8 5207 aa6.4□□□□□ -1.39
USP8-209ENST00000560297 MUC2Q02817 5179 aa6.37□□□□□ -1.39
USP8-209ENST00000560297 IMUPQ9GZP8 106 aa6.37□□□□□ -1.39
USP8-209ENST00000560297 A0A087WVE0 104 aa6.36□□□□□ -1.39
USP8-209ENST00000560297 SPINK7P58062 85 aa6.34□□□□□ -1.39
USP8-209ENST00000560297 Q5W150 140 aa6.34□□□□□ -1.39
USP8-209ENST00000560297 MT-ATP8P03928 68 aa6.33□□□□□ -1.4
USP8-209ENST00000560297 KRTAP4-2Q9BYR5 136 aa6.33□□□□□ -1.4
USP8-209ENST00000560297 UQCRQO14949 82 aa6.3□□□□□ -1.4
USP8-209ENST00000560297 LCE4AQ5TA78 99 aa6.3□□□□□ -1.4
USP8-209ENST00000560297 KRTAP19-4Q3LI73 84 aa6.29□□□□□ -1.4
USP8-209ENST00000560297 SCGB1A1P11684 91 aa6.28□□□□□ -1.4
USP8-209ENST00000560297 H3BS24 57 aa6.27□□□□□ -1.41
USP8-209ENST00000560297 HRES1P13985 223 aa6.27□□□□□ -1.41
USP8-209ENST00000560297 C7orf65Q6ZTY9 151 aa6.27□□□□□ -1.41
USP8-209ENST00000560297 RBM12B-AS1Q9P1G2 102 aa6.27□□□□□ -1.41
USP8-209ENST00000560297 IGKV2D-30A0A075B6S6 120 aa6.26□□□□□ -1.41
USP8-209ENST00000560297 TRAV22A0A0B4J277 110 aa6.26□□□□□ -1.41
USP8-209ENST00000560297 IGKV2-30P06310 120 aa6.26□□□□□ -1.41
USP8-209ENST00000560297 KRTAP19-2Q3LHN2 52 aa6.26□□□□□ -1.41
USP8-209ENST00000560297 COX6B2Q6YFQ2 88 aa6.26□□□□□ -1.41
USP8-209ENST00000560297 MPLKIPQ8TAP9 179 aa6.25□□□□□ -1.41
USP8-209ENST00000560297 OCR1Q9BZK8 76 aa6.24□□□□□ -1.41
USP8-209ENST00000560297 ATOX1O00244 68 aa6.23□□□□□ -1.41
USP8-209ENST00000560297 FAM236DA0A1B0GTK5 79 aa6.2□□□□□ -1.42
USP8-209ENST00000560297 FAM236AA0A1B0GUQ0 79 aa6.2□□□□□ -1.42
USP8-209ENST00000560297 FAM236BA0A1B0GV22 79 aa6.2□□□□□ -1.42
USP8-209ENST00000560297 LOC101927531A0A1B0GV80 90 aa6.2□□□□□ -1.42
USP8-209ENST00000560297 H0Y9P7 68 aa6.2□□□□□ -1.42
USP8-209ENST00000560297 FAM236CP0DP71 79 aa6.2□□□□□ -1.42
USP8-209ENST00000560297 C5orf47Q569G3 176 aa6.2□□□□□ -1.42
USP8-209ENST00000560297 SMIM20Q8N5G0 67 aa6.2□□□□□ -1.42
USP8-209ENST00000560297 MP68P56378 58 aa6.19□□□□□ -1.42
USP8-209ENST00000560297 CYP4F30PQ9H0H9 118 aa6.18□□□□□ -1.42
USP8-209ENST00000560297 KRTAP4-11Q9BYQ6 195 aa6.17□□□□□ -1.42
USP8-209ENST00000560297 FAT4Q6V0I7 4981 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms