RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 BVES-AS1Q5T3Y7 98 aa3.86□□□□□ -1.79
SPG11-213ENST00000558988 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.86□□□□□ -1.79
SPG11-213ENST00000558988 RAB37Q96AX2 223 aa3.86□□□□□ -1.79
SPG11-213ENST00000558988 CRCT1Q9UGL9 99 aa3.86□□□□□ -1.79
SPG11-213ENST00000558988 LST1O00453 97 aa3.85□□□□□ -1.79
SPG11-213ENST00000558988 COX8AP10176 69 aa3.85□□□□□ -1.79
SPG11-213ENST00000558988 ATP11AUNQ6ZP68 121 aa3.85□□□□□ -1.79
SPG11-213ENST00000558988 C14orf144Q96I85 54 aa3.85□□□□□ -1.79
SPG11-213ENST00000558988 Q96NJ1 140 aa3.84□□□□□ -1.79
SPG11-213ENST00000558988 A0A1B0GV72 72 aa3.83□□□□□ -1.8
SPG11-213ENST00000558988 SNCGO76070 127 aa3.83□□□□□ -1.8
SPG11-213ENST00000558988 FABP2P12104 132 aa3.83□□□□□ -1.8
SPG11-213ENST00000558988 NDUFV3P56181 108 aaKnown RBP3.83□□□□□ -1.8
SPG11-213ENST00000558988 S100A1P23297 94 aa3.82□□□□□ -1.8
SPG11-213ENST00000558988 SPATA45Q537H7 98 aa3.82□□□□□ -1.8
SPG11-213ENST00000558988 PPDPFLQ8WWR9 84 aa3.82□□□□□ -1.8
SPG11-213ENST00000558988 A0A087WSZ3 146 aa3.81□□□□□ -1.8
SPG11-213ENST00000558988 SIGMAR1Q99720 223 aa3.81□□□□□ -1.8
SPG11-213ENST00000558988 SS18L2Q9UHA2 77 aa3.81□□□□□ -1.8
SPG11-213ENST00000558988 H3BMG7 143 aa3.8□□□□□ -1.8
SPG11-213ENST00000558988 DLEU1O43261 78 aa3.8□□□□□ -1.8
SPG11-213ENST00000558988 VAMP8Q9BV40 100 aa3.8□□□□□ -1.8
SPG11-213ENST00000558988 OCR1Q9BZK8 76 aa3.8□□□□□ -1.8
SPG11-213ENST00000558988 A0A0B4J2C4 111 aa3.79□□□□□ -1.8
SPG11-213ENST00000558988 H0YGX0 51 aa3.79□□□□□ -1.8
SPG11-213ENST00000558988 DSCR10P59022 87 aa3.79□□□□□ -1.8
SPG11-213ENST00000558988 C2orf91Q6ZV80 131 aa3.79□□□□□ -1.8
SPG11-213ENST00000558988 TEN1Q86WV5 123 aa3.79□□□□□ -1.8
SPG11-213ENST00000558988 CEND1Q8N111 149 aa3.78□□□□□ -1.8
SPG11-213ENST00000558988 HIGD1BQ9P298 99 aa3.78□□□□□ -1.8
SPG11-213ENST00000558988 PRO1854Q9UHT4 67 aa3.78□□□□□ -1.8
SPG11-213ENST00000558988 PSMB2P49721 201 aa3.77□□□□□ -1.81
SPG11-213ENST00000558988 FXYD2P54710 66 aa3.77□□□□□ -1.81
SPG11-213ENST00000558988 TRBV20-1A0A075B6N2 111 aa3.76□□□□□ -1.81
SPG11-213ENST00000558988 A0A1W2PNM2 257 aa3.76□□□□□ -1.81
SPG11-213ENST00000558988 K7ERJ3 54 aa3.76□□□□□ -1.81
SPG11-213ENST00000558988 DNAL4O96015 105 aa3.76□□□□□ -1.81
SPG11-213ENST00000558988 DEFB116Q30KQ4 102 aa3.76□□□□□ -1.81
SPG11-213ENST00000558988 NOTCH2NLQ7Z3S9 236 aa3.76□□□□□ -1.81
SPG11-213ENST00000558988 FAM236DA0A1B0GTK5 79 aa3.75□□□□□ -1.81
SPG11-213ENST00000558988 IGKV4-1P06312 121 aa3.75□□□□□ -1.81
SPG11-213ENST00000558988 FAM236CP0DP71 79 aa3.75□□□□□ -1.81
SPG11-213ENST00000558988 ANKRD29Q8N6D5 301 aa3.75□□□□□ -1.81
SPG11-213ENST00000558988 C20orf166-AS1Q96NR2 134 aa3.75□□□□□ -1.81
SPG11-213ENST00000558988 FSIP2Q5CZC0 6907 aa3.74□□□□□ -1.81
SPG11-213ENST00000558988 A8MUU9 505 aa3.74□□□□□ -1.81
SPG11-213ENST00000558988 VPS25Q9BRG1 176 aa3.74□□□□□ -1.81
SPG11-213ENST00000558988 ORMDL1Q9P0S3 153 aa3.74□□□□□ -1.81
SPG11-213ENST00000558988 A0A1B0GX51 115 aa3.73□□□□□ -1.81
SPG11-213ENST00000558988 IGHV6-1A0A0B4J1U7 121 aa3.72□□□□□ -1.81
SPG11-213ENST00000558988 TRACP01848 142 aa3.72□□□□□ -1.81
SPG11-213ENST00000558988 CCKP06307 115 aa3.72□□□□□ -1.81
SPG11-213ENST00000558988 LINC00313P59037 77 aa3.72□□□□□ -1.81
SPG11-213ENST00000558988 COX6CP09669 75 aa3.71□□□□□ -1.82
SPG11-213ENST00000558988 HSD52Q0P140 79 aa3.71□□□□□ -1.82
SPG11-213ENST00000558988 TRBV7-4A0A0J9YYF1 115 aa3.7□□□□□ -1.82
SPG11-213ENST00000558988 SCGB1C2P0DMR2 95 aa3.7□□□□□ -1.82
SPG11-213ENST00000558988 KRTAP16-1A8MUX0 517 aa3.69□□□□□ -1.82
SPG11-213ENST00000558988 TMEM256-PLSCR3K7ERE1 68 aa3.69□□□□□ -1.82
SPG11-213ENST00000558988 PYY3Q5JQD4 70 aa3.69□□□□□ -1.82
SPG11-213ENST00000558988 RBM12B-AS1Q9P1G2 102 aa3.68□□□□□ -1.82
SPG11-213ENST00000558988 V9GYY9 64 aa3.68□□□□□ -1.82
SPG11-213ENST00000558988 H3BQ85 93 aa3.67□□□□□ -1.82
SPG11-213ENST00000558988 DSCR8Q96T75 97 aa3.66□□□□□ -1.82
SPG11-213ENST00000558988 LINC00472Q9H8W2 130 aa3.66□□□□□ -1.82
SPG11-213ENST00000558988 UQCR10Q9UDW1 63 aa3.66□□□□□ -1.82
SPG11-213ENST00000558988 A0A1B0GVX0 72 aa3.65□□□□□ -1.83
SPG11-213ENST00000558988 NDUFAF8A1L188 74 aa3.65□□□□□ -1.83
SPG11-213ENST00000558988 HRES1P13985 223 aa3.65□□□□□ -1.83
SPG11-213ENST00000558988 RBM3P98179 157 aaKnown RBP3.65□□□□□ -1.83
SPG11-213ENST00000558988 NAA38Q9BRA0 125 aaKnown RBP3.65□□□□□ -1.83
SPG11-213ENST00000558988 MT2AP02795 61 aa3.64□□□□□ -1.83
SPG11-213ENST00000558988 BAALC-AS2P0C853 105 aa3.64□□□□□ -1.83
SPG11-213ENST00000558988 LYRM7Q5U5X0 104 aa3.64□□□□□ -1.83
SPG11-213ENST00000558988 C9JAW5 83 aa3.63□□□□□ -1.83
SPG11-213ENST00000558988 C8orf87E5RJ46 101 aa3.63□□□□□ -1.83
SPG11-213ENST00000558988 KRTAP10-10P60014 251 aa3.63□□□□□ -1.83
SPG11-213ENST00000558988 MT1FP04733 61 aa3.62□□□□□ -1.83
SPG11-213ENST00000558988 ZCCHC13Q8WW36 166 aaKnown RBP3.62□□□□□ -1.83
SPG11-213ENST00000558988 NDUFB1O75438 58 aa3.61□□□□□ -1.83
SPG11-213ENST00000558988 J3KT08 172 aa3.6□□□□□ -1.83
SPG11-213ENST00000558988 SPINK7P58062 85 aa3.6□□□□□ -1.83
SPG11-213ENST00000558988 C5orf47Q569G3 176 aa3.6□□□□□ -1.83
SPG11-213ENST00000558988 FLGP20930 4061 aaPredicted RBP3.6□□□□□ -1.83
SPG11-213ENST00000558988 CXCL6P80162 114 aa3.59□□□□□ -1.83
SPG11-213ENST00000558988 ATXN8Q156A1 80 aa3.59□□□□□ -1.83
SPG11-213ENST00000558988 Q6ZQT0 140 aa3.59□□□□□ -1.83
SPG11-213ENST00000558988 WFDC13Q8IUB5 93 aa3.59□□□□□ -1.83
SPG11-213ENST00000558988 M0R143 59 aa3.58□□□□□ -1.84
SPG11-213ENST00000558988 C14orf132Q9NPU4 83 aa3.58□□□□□ -1.84
SPG11-213ENST00000558988 C8orf17Q9NRJ1 99 aa3.58□□□□□ -1.84
SPG11-213ENST00000558988 IGKV3D-7A0A0C4DH55 119 aa3.56□□□□□ -1.84
SPG11-213ENST00000558988 A8MWP4 228 aa3.56□□□□□ -1.84
SPG11-213ENST00000558988 JMJD7-PLA2G4BH0Y9G9 81 aa3.56□□□□□ -1.84
SPG11-213ENST00000558988 BATFQ16520 125 aa3.56□□□□□ -1.84
SPG11-213ENST00000558988 LOC110117498A0A087WWA1 95 aa3.55□□□□□ -1.84
SPG11-213ENST00000558988 NDUFS5O43920 106 aa3.55□□□□□ -1.84
SPG11-213ENST00000558988 NREPQ16612 68 aa3.54□□□□□ -1.84
SPG11-213ENST00000558988 MUC19Q7Z5P9 8384 aa3.53□□□□□ -1.85
SPG11-213ENST00000558988 PDE6GP18545 87 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms