RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 IGKV3D-7A0A0C4DH55 119 aa10.05□□□□□ -0.8
CLPX-203ENST00000558958 NDUFB1O75438 58 aa10.04□□□□□ -0.8
CLPX-203ENST00000558958 A0A1B0GVX0 72 aa10.04□□□□□ -0.8
CLPX-203ENST00000558958 K7EQZ3 153 aa10.03□□□□□ -0.8
CLPX-203ENST00000558958 PRR15Q8IV56 129 aa10.02□□□□□ -0.81
CLPX-203ENST00000558958 Q8N9L7 120 aa10.02□□□□□ -0.81
CLPX-203ENST00000558958 IGHV6-1A0A0B4J1U7 121 aa10.01□□□□□ -0.81
CLPX-203ENST00000558958 HMCN2Q8NDA2 5059 aa9.99□□□□□ -0.81
CLPX-203ENST00000558958 KRTAP13-3Q3SY46 172 aa9.97□□□□□ -0.81
CLPX-203ENST00000558958 NOTCH2NLQ7Z3S9 236 aa9.96□□□□□ -0.82
CLPX-203ENST00000558958 C9orf92A6NGG3 77 aa9.94□□□□□ -0.82
CLPX-203ENST00000558958 C8orf87E5RJ46 101 aa9.94□□□□□ -0.82
CLPX-203ENST00000558958 MT-ATP8P03928 68 aa9.94□□□□□ -0.82
CLPX-203ENST00000558958 LINC00313P59037 77 aa9.94□□□□□ -0.82
CLPX-203ENST00000558958 TPRXLQ17RH7 258 aa9.94□□□□□ -0.82
CLPX-203ENST00000558958 C8orf17Q9NRJ1 99 aa9.93□□□□□ -0.82
CLPX-203ENST00000558958 HIST1H4AP62805 103 aaKnown RBP9.91□□□□□ -0.82
CLPX-203ENST00000558958 LCE2DQ5TA82 110 aaPredicted RBP9.91□□□□□ -0.82
CLPX-203ENST00000558958 MMP24-AS1A0A0U1RRL7 71 aa9.91□□□□□ -0.82
CLPX-203ENST00000558958 LPAP08519 4548 aa9.88□□□□□ -0.83
CLPX-203ENST00000558958 KRTAP16-1A8MUX0 517 aa9.87□□□□□ -0.83
CLPX-203ENST00000558958 IMUPQ9GZP8 106 aa9.87□□□□□ -0.83
CLPX-203ENST00000558958 A0A087WVE0 104 aa9.86□□□□□ -0.83
CLPX-203ENST00000558958 HCG22E2RYF7 251 aa9.86□□□□□ -0.83
CLPX-203ENST00000558958 hDV103S1A0JD37 113 aa9.85□□□□□ -0.83
CLPX-203ENST00000558958 WFDC13Q8IUB5 93 aa9.85□□□□□ -0.83
CLPX-203ENST00000558958 XP32Q5T750 250 aa9.84□□□□□ -0.83
CLPX-203ENST00000558958 CASC2Q6XLA1 102 aa9.84□□□□□ -0.83
CLPX-203ENST00000558958 TMEM254Q8TBM7 123 aa9.83□□□□□ -0.84
CLPX-203ENST00000558958 LRP2P98164 4655 aa9.81□□□□□ -0.84
CLPX-203ENST00000558958 MRPL34Q9BQ48 92 aaKnown RBP9.8□□□□□ -0.84
CLPX-203ENST00000558958 C20orf166-AS1Q96NR2 134 aa9.79□□□□□ -0.84
CLPX-203ENST00000558958 Q8N9P0 234 aaPredicted RBP9.78□□□□□ -0.84
CLPX-203ENST00000558958 A8MUU9 505 aa9.77□□□□□ -0.85
CLPX-203ENST00000558958 Q75L30 129 aa9.76□□□□□ -0.85
CLPX-203ENST00000558958 RPL37P61927 97 aaKnown RBP9.72□□□□□ -0.85
CLPX-203ENST00000558958 NDUFS5O43920 106 aa9.7□□□□□ -0.86
CLPX-203ENST00000558958 FAM236AA0A1B0GUQ0 79 aa9.68□□□□□ -0.86
CLPX-203ENST00000558958 FAM236BA0A1B0GV22 79 aa9.68□□□□□ -0.86
CLPX-203ENST00000558958 SCGB1A1P11684 91 aa9.64□□□□□ -0.87
CLPX-203ENST00000558958 KRTAP3-3Q9BYR6 98 aa9.64□□□□□ -0.87
CLPX-203ENST00000558958 KRTAP3-2Q9BYR7 98 aa9.64□□□□□ -0.87
CLPX-203ENST00000558958 ATP11AUNQ6ZP68 121 aa9.63□□□□□ -0.87
CLPX-203ENST00000558958 TP53AIP1Q9HCN2 124 aa9.63□□□□□ -0.87
CLPX-203ENST00000558958 MUC17Q685J3 4493 aa9.61□□□□□ -0.87
CLPX-203ENST00000558958 ZCCHC13Q8WW36 166 aaKnown RBP9.61□□□□□ -0.87
CLPX-203ENST00000558958 SEC61BP60468 96 aaKnown RBP9.6□□□□□ -0.87
CLPX-203ENST00000558958 PCOTHQ58A44 107 aa9.59□□□□□ -0.87
CLPX-203ENST00000558958 OCR1Q9BZK8 76 aa9.59□□□□□ -0.87
CLPX-203ENST00000558958 Q5W150 140 aa9.58□□□□□ -0.88
CLPX-203ENST00000558958 UBR4Q5T4S7 5183 aa9.57□□□□□ -0.88
CLPX-203ENST00000558958 ATOX1O00244 68 aa9.55□□□□□ -0.88
CLPX-203ENST00000558958 UQCRQO14949 82 aa9.55□□□□□ -0.88
CLPX-203ENST00000558958 SMIM20Q8N5G0 67 aa9.53□□□□□ -0.88
CLPX-203ENST00000558958 TRAV22A0A0B4J277 110 aa9.5□□□□□ -0.89
CLPX-203ENST00000558958 TRAV7A0A075B6U4 112 aa9.49□□□□□ -0.89
CLPX-203ENST00000558958 RNF213Q63HN8 5207 aa9.48□□□□□ -0.89
CLPX-203ENST00000558958 H0Y9P7 68 aa9.45□□□□□ -0.9
CLPX-203ENST00000558958 C5orf47Q569G3 176 aa9.45□□□□□ -0.9
CLPX-203ENST00000558958 SERP2Q8N6R1 65 aa9.43□□□□□ -0.9
CLPX-203ENST00000558958 KRTAP4-1Q9BYQ7 146 aa9.42□□□□□ -0.9
CLPX-203ENST00000558958 MP68P56378 58 aa9.41□□□□□ -0.9
CLPX-203ENST00000558958 SPINK7P58062 85 aa9.4□□□□□ -0.9
CLPX-203ENST00000558958 IGKV2D-30A0A075B6S6 120 aa9.39□□□□□ -0.91
CLPX-203ENST00000558958 IGKV2-30P06310 120 aa9.39□□□□□ -0.91
CLPX-203ENST00000558958 MUC2Q02817 5179 aa9.38□□□□□ -0.91
CLPX-203ENST00000558958 LOC101927531A0A1B0GV80 90 aa9.37□□□□□ -0.91
CLPX-203ENST00000558958 C7orf65Q6ZTY9 151 aa9.37□□□□□ -0.91
CLPX-203ENST00000558958 LINC00208Q96KT6 92 aa9.37□□□□□ -0.91
CLPX-203ENST00000558958 H3BPC8 53 aa9.36□□□□□ -0.91
CLPX-203ENST00000558958 C1orf64Q8NEQ6 169 aa9.36□□□□□ -0.91
CLPX-203ENST00000558958 ANAPC13Q9BS18 74 aa9.36□□□□□ -0.91
CLPX-203ENST00000558958 CYP4F30PQ9H0H9 118 aa9.34□□□□□ -0.91
CLPX-203ENST00000558958 COX7CP15954 63 aa9.33□□□□□ -0.92
CLPX-203ENST00000558958 A0A0U1RQV1 116 aa9.29□□□□□ -0.92
CLPX-203ENST00000558958 HRES1P13985 223 aa9.28□□□□□ -0.92
CLPX-203ENST00000558958 C20orf197Q8N268 126 aa9.28□□□□□ -0.92
CLPX-203ENST00000558958 SNURFQ9Y675 71 aa9.24□□□□□ -0.93
CLPX-203ENST00000558958 KLKP1Q107X0 134 aa9.22□□□□□ -0.93
CLPX-203ENST00000558958 MPLKIPQ8TAP9 179 aa9.22□□□□□ -0.93
CLPX-203ENST00000558958 C4orf26Q17RF5 130 aa9.17□□□□□ -0.94
CLPX-203ENST00000558958 CCDC179H3BU77 68 aa9.16□□□□□ -0.94
CLPX-203ENST00000558958 RBM12B-AS1Q9P1G2 102 aa9.16□□□□□ -0.94
CLPX-203ENST00000558958 KRTAP19-2Q3LHN2 52 aa9.13□□□□□ -0.95
CLPX-203ENST00000558958 CYSTM1Q9H1C7 97 aa9.11□□□□□ -0.95
CLPX-203ENST00000558958 COX6B2Q6YFQ2 88 aa9.1□□□□□ -0.95
CLPX-203ENST00000558958 FAM236DA0A1B0GTK5 79 aa9.08□□□□□ -0.96
CLPX-203ENST00000558958 NDUFC1O43677 76 aa9.08□□□□□ -0.96
CLPX-203ENST00000558958 FAM236CP0DP71 79 aa9.08□□□□□ -0.96
CLPX-203ENST00000558958 FAT4Q6V0I7 4981 aa9.07□□□□□ -0.96
CLPX-203ENST00000558958 KRTAP3-1Q9BYR8 98 aa9.07□□□□□ -0.96
CLPX-203ENST00000558958 H7BZZ5 65 aa9.05□□□□□ -0.96
CLPX-203ENST00000558958 LCE2CQ5TA81 110 aa9.04□□□□□ -0.96
CLPX-203ENST00000558958 FLGP20930 4061 aaPredicted RBP9.04□□□□□ -0.96
CLPX-203ENST00000558958 PCP4P48539 62 aa9.02□□□□□ -0.96
CLPX-203ENST00000558958 SPANXA2-OT1Q8N9U9 137 aa9.01□□□□□ -0.97
CLPX-203ENST00000558958 H1FX-AS1Q4G0G2 97 aa8.99□□□□□ -0.97
CLPX-203ENST00000558958 A8MUN3 132 aa8.97□□□□□ -0.97
CLPX-203ENST00000558958 DMAC1Q96GE9 116 aa8.96□□□□□ -0.97
CLPX-203ENST00000558958 ACYP2P14621 99 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms