RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 MT1LQ93083 61 aa-0.88□□□□□ -2.55
CASC4-206ENST00000558847 ITPR1Q14643 2758 aa-0.88□□□□□ -2.55
CASC4-206ENST00000558847 CHD7Q9P2D1 2997 aa-0.88□□□□□ -2.55
CASC4-206ENST00000558847 LYNX1G3V0Z9 82 aa-0.89□□□□□ -2.55
CASC4-206ENST00000558847 PRLHP81277 87 aa-0.89□□□□□ -2.55
CASC4-206ENST00000558847 FRYQ5TBA9 3013 aa-0.89□□□□□ -2.55
CASC4-206ENST00000558847 ZNF831Q5JPB2 1677 aa-0.9□□□□□ -2.55
CASC4-206ENST00000558847 MT2AP02795 61 aa-0.9□□□□□ -2.55
CASC4-206ENST00000558847 MT1BP07438 61 aa-0.9□□□□□ -2.55
CASC4-206ENST00000558847 KRTAP20-1Q3LI63 56 aa-0.9□□□□□ -2.55
CASC4-206ENST00000558847 MT1MQ8N339 61 aa-0.9□□□□□ -2.55
CASC4-206ENST00000558847 APOBP04114 4563 aaKnown RBP-0.9□□□□□ -2.55
CASC4-206ENST00000558847 DNAH7Q8WXX0 4024 aa-0.91□□□□□ -2.55
CASC4-206ENST00000558847 DYNC1H1Q14204 4646 aaKnown RBP-0.91□□□□□ -2.55
CASC4-206ENST00000558847 MYO9AB2RTY4 2548 aa-0.91□□□□□ -2.55
CASC4-206ENST00000558847 SMR3BP02814 79 aaPredicted RBP-0.91□□□□□ -2.56
CASC4-206ENST00000558847 EYSQ5T1H1 3165 aa-0.92□□□□□ -2.56
CASC4-206ENST00000558847 MED14O60244 1454 aa-0.92□□□□□ -2.56
CASC4-206ENST00000558847 TLN2Q9Y4G6 2542 aa-0.92□□□□□ -2.56
CASC4-206ENST00000558847 MT1GP13640 62 aa-0.92□□□□□ -2.56
CASC4-206ENST00000558847 CEP295Q9C0D2 2601 aa-0.92□□□□□ -2.56
CASC4-206ENST00000558847 LRBAP50851 2863 aa-0.93□□□□□ -2.56
CASC4-206ENST00000558847 C5orf42Q9H799 3197 aa-0.93□□□□□ -2.56
CASC4-206ENST00000558847 ABCC1P33527 1531 aa-0.93□□□□□ -2.56
CASC4-206ENST00000558847 MRPL33O75394 65 aaKnown RBP-0.93□□□□□ -2.56
CASC4-206ENST00000558847 SMIM13P0DJ93 91 aa-0.93□□□□□ -2.56
CASC4-206ENST00000558847 SMARCA2P51531 1590 aa-0.93□□□□□ -2.56
CASC4-206ENST00000558847 DNAH8Q96JB1 4490 aa-0.94□□□□□ -2.56
CASC4-206ENST00000558847 TNP1P09430 55 aa-0.94□□□□□ -2.56
CASC4-206ENST00000558847 CFAP46Q8IYW2 2715 aa-0.94□□□□□ -2.56
CASC4-206ENST00000558847 CCDC18Q5T9S5 1454 aa-0.94□□□□□ -2.56
CASC4-206ENST00000558847 THOC2Q8NI27 1593 aaKnown RBP-0.95□□□□□ -2.56
CASC4-206ENST00000558847 DEFB131BA0A096LNP1 70 aa-0.95□□□□□ -2.56
CASC4-206ENST00000558847 MMP24-AS1A0A0U1RRL7 71 aa-0.95□□□□□ -2.56
CASC4-206ENST00000558847 H3BUT2 72 aa-0.95□□□□□ -2.56
CASC4-206ENST00000558847 BPTFQ12830 3046 aa-0.95□□□□□ -2.56
CASC4-206ENST00000558847 RANBP2P49792 3224 aaKnown RBP-0.95□□□□□ -2.56
CASC4-206ENST00000558847 SPTAN1Q13813 2472 aaKnown RBP-0.96□□□□□ -2.56
CASC4-206ENST00000558847 KRTAP8-1Q8IUC2 63 aa-0.96□□□□□ -2.56
CASC4-206ENST00000558847 DCAF1Q9Y4B6 1507 aa-0.96□□□□□ -2.56
CASC4-206ENST00000558847 CDC42BPGQ6DT37 1551 aa-0.96□□□□□ -2.56
CASC4-206ENST00000558847 DDX60LQ5H9U9 1706 aaKnown RBP-0.97□□□□□ -2.56
CASC4-206ENST00000558847 CSMD1Q96PZ7 3565 aa-0.97□□□□□ -2.57
CASC4-206ENST00000558847 CDC42BPAQ5VT25 1732 aa-0.98□□□□□ -2.57
CASC4-206ENST00000558847 KDM5DQ9BY66 1539 aa-0.98□□□□□ -2.57
CASC4-206ENST00000558847 IAPPP10997 89 aa-0.98□□□□□ -2.57
CASC4-206ENST00000558847 DEFB106AQ8N104 65 aa-0.98□□□□□ -2.57
CASC4-206ENST00000558847 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.98□□□□□ -2.57
CASC4-206ENST00000558847 SCN11AQ9UI33 1791 aa-0.98□□□□□ -2.57
CASC4-206ENST00000558847 TLN1Q9Y490 2541 aaKnown RBP-0.98□□□□□ -2.57
CASC4-206ENST00000558847 TRRAPQ9Y4A5 3859 aa-0.99□□□□□ -2.57
CASC4-206ENST00000558847 DEFB130BP0DP73 79 aa-0.99□□□□□ -2.57
CASC4-206ENST00000558847 DEFB130AP0DP74 79 aa-0.99□□□□□ -2.57
CASC4-206ENST00000558847 SMG1Q96Q15 3661 aaKnown RBP-0.99□□□□□ -2.57
CASC4-206ENST00000558847 DMXL2Q8TDJ6 3036 aa-0.99□□□□□ -2.57
CASC4-206ENST00000558847 BVES-AS1Q5T3Y7 98 aa-1□□□□□ -2.57
CASC4-206ENST00000558847 ITPR2Q14571 2701 aa-1□□□□□ -2.57
CASC4-206ENST00000558847 ERVK-7P63135 1459 aa-1□□□□□ -2.57
CASC4-206ENST00000558847 CFAP43Q8NDM7 1665 aa-1□□□□□ -2.57
CASC4-206ENST00000558847 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.01□□□□□ -2.57
CASC4-206ENST00000558847 HFM1A2PYH4 1435 aa-1.01□□□□□ -2.57
CASC4-206ENST00000558847 PLCH1Q4KWH8 1693 aa-1.02□□□□□ -2.57
CASC4-206ENST00000558847 ADGRG4Q8IZF6 3080 aa-1.02□□□□□ -2.57
CASC4-206ENST00000558847 SPTBN5Q9NRC6 3674 aaKnown RBP-1.03□□□□□ -2.57
CASC4-206ENST00000558847 RALGAPBQ86X10 1494 aa-1.03□□□□□ -2.57
CASC4-206ENST00000558847 IGLV5-48A0A075B6I7 105 aa-1.03□□□□□ -2.57
CASC4-206ENST00000558847 LINC01546A6NGU7 62 aa-1.03□□□□□ -2.57
CASC4-206ENST00000558847 DEFB4AO15263 64 aa-1.03□□□□□ -2.57
CASC4-206ENST00000558847 UBL5Q9BZL1 73 aa-1.03□□□□□ -2.57
CASC4-206ENST00000558847 DNAH17Q9UFH2 4485 aa-1.03□□□□□ -2.57
CASC4-206ENST00000558847 CFAP74Q9C0B2 1584 aa-1.04□□□□□ -2.58
CASC4-206ENST00000558847 DNAH5Q8TE73 4624 aa-1.04□□□□□ -2.58
CASC4-206ENST00000558847 KCNQ1DNQ9H478 68 aa-1.04□□□□□ -2.58
CASC4-206ENST00000558847 ATMQ13315 3056 aa-1.04□□□□□ -2.58
CASC4-206ENST00000558847 KRTAP19-6Q3LI70 58 aa-1.05□□□□□ -2.58
CASC4-206ENST00000558847 NOP10Q9NPE3 64 aaKnown RBP-1.05□□□□□ -2.58
CASC4-206ENST00000558847 C18orf32Q8TCD1 76 aa-1.06□□□□□ -2.58
CASC4-206ENST00000558847 ANKRD36CQ5JPF3 1778 aa-1.06□□□□□ -2.58
CASC4-206ENST00000558847 ANKARQ7Z5J8 1434 aa-1.06□□□□□ -2.58
CASC4-206ENST00000558847 MT1FP04733 61 aa-1.07□□□□□ -2.58
CASC4-206ENST00000558847 RPS29P62273 56 aaKnown RBP-1.07□□□□□ -2.58
CASC4-206ENST00000558847 WT1-ASQ06250 92 aa-1.07□□□□□ -2.58
CASC4-206ENST00000558847 MGAQ8IWI9 3026 aa-1.07□□□□□ -2.58
CASC4-206ENST00000558847 DNAH10Q8IVF4 4471 aa-1.07□□□□□ -2.58
CASC4-206ENST00000558847 ITSN1Q15811 1721 aa-1.07□□□□□ -2.58
CASC4-206ENST00000558847 TOGARAM1Q9Y4F4 1720 aa-1.07□□□□□ -2.58
CASC4-206ENST00000558847 ARHGAP35Q9NRY4 1499 aa-1.07□□□□□ -2.58
CASC4-206ENST00000558847 SPENQ96T58 3664 aaKnown RBP-1.07□□□□□ -2.58
CASC4-206ENST00000558847 BOD1L1Q8NFC6 3051 aa-1.07□□□□□ -2.58
CASC4-206ENST00000558847 FREM2Q5SZK8 3169 aa-1.08□□□□□ -2.58
CASC4-206ENST00000558847 RICTORQ6R327 1708 aa-1.08□□□□□ -2.58
CASC4-206ENST00000558847 H3BUA1 57 aa-1.08□□□□□ -2.58
CASC4-206ENST00000558847 M0QZ58 72 aa-1.08□□□□□ -2.58
CASC4-206ENST00000558847 SPART-AS1P0CW21 52 aa-1.08□□□□□ -2.58
CASC4-206ENST00000558847 CSMD2Q7Z408 3487 aa-1.1□□□□□ -2.59
CASC4-206ENST00000558847 CD163L1Q9NR16 1453 aa-1.1□□□□□ -2.59
CASC4-206ENST00000558847 LY75O60449 1722 aa-1.11□□□□□ -2.59
CASC4-206ENST00000558847 PARP4Q9UKK3 1724 aaKnown RBP-1.11□□□□□ -2.59
CASC4-206ENST00000558847 MAST1Q9Y2H9 1570 aa-1.11□□□□□ -2.59
CASC4-206ENST00000558847 KIAA0586Q9BVV6 1533 aa-1.11□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms