RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 DSCR10P59022 87 aa9.49□□□□□ -0.89
SNX1-203ENST00000558040 A0A1B0GVX0 72 aa9.45□□□□□ -0.9
SNX1-203ENST00000558040 K7EQZ3 153 aa9.45□□□□□ -0.9
SNX1-203ENST00000558040 PRR15Q8IV56 129 aa9.45□□□□□ -0.9
SNX1-203ENST00000558040 Q8N9L7 120 aa9.43□□□□□ -0.9
SNX1-203ENST00000558040 IGHV6-1A0A0B4J1U7 121 aa9.42□□□□□ -0.9
SNX1-203ENST00000558040 MT-ATP8P03928 68 aa9.42□□□□□ -0.9
SNX1-203ENST00000558040 HIST1H4AP62805 103 aaKnown RBP9.42□□□□□ -0.9
SNX1-203ENST00000558040 PCLOQ9Y6V0 5065 aa9.42□□□□□ -0.9
SNX1-203ENST00000558040 IGLV7-46A0A075B6I9 117 aa9.41□□□□□ -0.9
SNX1-203ENST00000558040 PRR4Q16378 134 aa9.41□□□□□ -0.9
SNX1-203ENST00000558040 C8orf87E5RJ46 101 aa9.4□□□□□ -0.9
SNX1-203ENST00000558040 IMUPQ9GZP8 106 aa9.4□□□□□ -0.9
SNX1-203ENST00000558040 C8orf17Q9NRJ1 99 aa9.37□□□□□ -0.91
SNX1-203ENST00000558040 LINC00313P59037 77 aa9.36□□□□□ -0.91
SNX1-203ENST00000558040 MMP24-AS1A0A0U1RRL7 71 aa9.33□□□□□ -0.92
SNX1-203ENST00000558040 HCG22E2RYF7 251 aa9.33□□□□□ -0.92
SNX1-203ENST00000558040 A0A087WVE0 104 aa9.32□□□□□ -0.92
SNX1-203ENST00000558040 C9orf92A6NGG3 77 aa9.31□□□□□ -0.92
SNX1-203ENST00000558040 hDV103S1A0JD37 113 aa9.3□□□□□ -0.92
SNX1-203ENST00000558040 CASC2Q6XLA1 102 aa9.3□□□□□ -0.92
SNX1-203ENST00000558040 NOTCH2NLQ7Z3S9 236 aa9.3□□□□□ -0.92
SNX1-203ENST00000558040 TPRXLQ17RH7 258 aa9.29□□□□□ -0.92
SNX1-203ENST00000558040 KRTAP13-3Q3SY46 172 aa9.29□□□□□ -0.92
SNX1-203ENST00000558040 WFDC13Q8IUB5 93 aa9.29□□□□□ -0.92
SNX1-203ENST00000558040 TMEM254Q8TBM7 123 aa9.28□□□□□ -0.92
SNX1-203ENST00000558040 MRPL34Q9BQ48 92 aaKnown RBP9.25□□□□□ -0.93
SNX1-203ENST00000558040 KRTAP16-1A8MUX0 517 aa9.23□□□□□ -0.93
SNX1-203ENST00000558040 LCE2BO14633 110 aa9.22□□□□□ -0.93
SNX1-203ENST00000558040 FAM236AA0A1B0GUQ0 79 aa9.21□□□□□ -0.94
SNX1-203ENST00000558040 FAM236BA0A1B0GV22 79 aa9.21□□□□□ -0.94
SNX1-203ENST00000558040 SCGB1A1P11684 91 aa9.19□□□□□ -0.94
SNX1-203ENST00000558040 NDUFS5O43920 106 aa9.18□□□□□ -0.94
SNX1-203ENST00000558040 XP32Q5T750 250 aa9.18□□□□□ -0.94
SNX1-203ENST00000558040 Q8N9P0 234 aaPredicted RBP9.18□□□□□ -0.94
SNX1-203ENST00000558040 C20orf166-AS1Q96NR2 134 aa9.17□□□□□ -0.94
SNX1-203ENST00000558040 A8MUU9 505 aa9.15□□□□□ -0.94
SNX1-203ENST00000558040 Q75L30 129 aa9.15□□□□□ -0.94
SNX1-203ENST00000558040 TP53AIP1Q9HCN2 124 aa9.13□□□□□ -0.95
SNX1-203ENST00000558040 ATOX1O00244 68 aa9.12□□□□□ -0.95
SNX1-203ENST00000558040 RPL37P61927 97 aaKnown RBP9.11□□□□□ -0.95
SNX1-203ENST00000558040 SMIM20Q8N5G0 67 aa9.1□□□□□ -0.95
SNX1-203ENST00000558040 UQCRQO14949 82 aa9.07□□□□□ -0.96
SNX1-203ENST00000558040 OCR1Q9BZK8 76 aa9.07□□□□□ -0.96
SNX1-203ENST00000558040 ATP11AUNQ6ZP68 121 aa9.06□□□□□ -0.96
SNX1-203ENST00000558040 ZCCHC13Q8WW36 166 aaKnown RBP9.04□□□□□ -0.96
SNX1-203ENST00000558040 HERC1Q15751 4861 aa9.04□□□□□ -0.96
SNX1-203ENST00000558040 TRAV7A0A075B6U4 112 aa9.02□□□□□ -0.97
SNX1-203ENST00000558040 TRAV22A0A0B4J277 110 aa9□□□□□ -0.97
SNX1-203ENST00000558040 SEC61BP60468 96 aaKnown RBP9□□□□□ -0.97
SNX1-203ENST00000558040 SERP2Q8N6R1 65 aa8.98□□□□□ -0.97
SNX1-203ENST00000558040 C5orf47Q569G3 176 aa8.97□□□□□ -0.97
SNX1-203ENST00000558040 Q5W150 140 aa8.97□□□□□ -0.97
SNX1-203ENST00000558040 HMCN2Q8NDA2 5059 aa8.96□□□□□ -0.97
SNX1-203ENST00000558040 H0Y9P7 68 aa8.96□□□□□ -0.98
SNX1-203ENST00000558040 MP68P56378 58 aa8.96□□□□□ -0.98
SNX1-203ENST00000558040 ANAPC13Q9BS18 74 aa8.96□□□□□ -0.98
SNX1-203ENST00000558040 LPAP08519 4548 aa8.95□□□□□ -0.98
SNX1-203ENST00000558040 PCOTHQ58A44 107 aa8.95□□□□□ -0.98
SNX1-203ENST00000558040 H3BPC8 53 aa8.9□□□□□ -0.98
SNX1-203ENST00000558040 COX7CP15954 63 aa8.89□□□□□ -0.99
SNX1-203ENST00000558040 LOC101927531A0A1B0GV80 90 aa8.87□□□□□ -0.99
SNX1-203ENST00000558040 LINC00208Q96KT6 92 aa8.87□□□□□ -0.99
SNX1-203ENST00000558040 C7orf65Q6ZTY9 151 aa8.86□□□□□ -0.99
SNX1-203ENST00000558040 C1orf64Q8NEQ6 169 aa8.86□□□□□ -0.99
SNX1-203ENST00000558040 IGKV2D-30A0A075B6S6 120 aa8.85□□□□□ -0.99
SNX1-203ENST00000558040 IGKV2-30P06310 120 aa8.85□□□□□ -0.99
SNX1-203ENST00000558040 LRP2P98164 4655 aa8.84□□□□□ -0.99
SNX1-203ENST00000558040 SPINK7P58062 85 aa8.82□□□□□ -1
SNX1-203ENST00000558040 C20orf197Q8N268 126 aa8.82□□□□□ -1
SNX1-203ENST00000558040 A0A0U1RQV1 116 aa8.81□□□□□ -1
SNX1-203ENST00000558040 CYP4F30PQ9H0H9 118 aa8.79□□□□□ -1
SNX1-203ENST00000558040 KLKP1Q107X0 134 aa8.76□□□□□ -1.01
SNX1-203ENST00000558040 SNURFQ9Y675 71 aa8.76□□□□□ -1.01
SNX1-203ENST00000558040 MUC17Q685J3 4493 aa8.75□□□□□ -1.01
SNX1-203ENST00000558040 CCDC179H3BU77 68 aa8.71□□□□□ -1.02
SNX1-203ENST00000558040 LCE2AQ5TA79 106 aaPredicted RBP8.7□□□□□ -1.02
SNX1-203ENST00000558040 KRTAP4-1Q9BYQ7 146 aa8.7□□□□□ -1.02
SNX1-203ENST00000558040 NDUFC1O43677 76 aa8.68□□□□□ -1.02
SNX1-203ENST00000558040 HRES1P13985 223 aa8.67□□□□□ -1.02
SNX1-203ENST00000558040 PCP4P48539 62 aa8.67□□□□□ -1.02
SNX1-203ENST00000558040 RBM12B-AS1Q9P1G2 102 aa8.63□□□□□ -1.03
SNX1-203ENST00000558040 C4orf26Q17RF5 130 aa8.61□□□□□ -1.03
SNX1-203ENST00000558040 MPLKIPQ8TAP9 179 aa8.59□□□□□ -1.03
SNX1-203ENST00000558040 CYSTM1Q9H1C7 97 aa8.59□□□□□ -1.03
SNX1-203ENST00000558040 H7BZZ5 65 aa8.58□□□□□ -1.04
SNX1-203ENST00000558040 UBR4Q5T4S7 5183 aa8.58□□□□□ -1.04
SNX1-203ENST00000558040 COX6B2Q6YFQ2 88 aa8.57□□□□□ -1.04
SNX1-203ENST00000558040 FAM236DA0A1B0GTK5 79 aa8.56□□□□□ -1.04
SNX1-203ENST00000558040 FAM236CP0DP71 79 aa8.56□□□□□ -1.04
SNX1-203ENST00000558040 LCE2CQ5TA81 110 aa8.56□□□□□ -1.04
SNX1-203ENST00000558040 SPANXA2-OT1Q8N9U9 137 aa8.56□□□□□ -1.04
SNX1-203ENST00000558040 A8MUN3 132 aa8.51□□□□□ -1.05
SNX1-203ENST00000558040 DMAC1Q96GE9 116 aa8.48□□□□□ -1.05
SNX1-203ENST00000558040 RNF213Q63HN8 5207 aa8.48□□□□□ -1.05
SNX1-203ENST00000558040 TMEM258P61165 79 aa8.47□□□□□ -1.05
SNX1-203ENST00000558040 ATP5EP56381 51 aaPredicted RBP8.45□□□□□ -1.06
SNX1-203ENST00000558040 H1FX-AS1Q4G0G2 97 aa8.45□□□□□ -1.06
SNX1-203ENST00000558040 KRTAP3-1Q9BYR8 98 aa8.45□□□□□ -1.06
SNX1-203ENST00000558040 ACYP2P14621 99 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms