RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-231ENST00000557336 Q8N9P0 234 aaPredicted RBP5.51□□□□□ -1.53
HNRNPC-231ENST00000557336 SYNE2Q8WXH0 6885 aaKnown RBP5.5□□□□□ -1.53
HNRNPC-231ENST00000557336 IGKV4-1P06312 121 aa5.5□□□□□ -1.53
HNRNPC-231ENST00000557336 DEFB116Q30KQ4 102 aa5.5□□□□□ -1.53
HNRNPC-231ENST00000557336 LINC00472Q9H8W2 130 aa5.5□□□□□ -1.53
HNRNPC-231ENST00000557336 TRBV7-4A0A0J9YYF1 115 aa5.49□□□□□ -1.53
HNRNPC-231ENST00000557336 S100A6P06703 90 aa5.49□□□□□ -1.53
HNRNPC-231ENST00000557336 KRTAP10-10P60014 251 aa5.49□□□□□ -1.53
HNRNPC-231ENST00000557336 LCE1AQ5T7P2 110 aa5.49□□□□□ -1.53
HNRNPC-231ENST00000557336 PRO1854Q9UHT4 67 aa5.49□□□□□ -1.53
HNRNPC-231ENST00000557336 SNCGO76070 127 aa5.48□□□□□ -1.53
HNRNPC-231ENST00000557336 FXYD2P54710 66 aa5.48□□□□□ -1.53
HNRNPC-231ENST00000557336 CEND1Q8N111 149 aa5.48□□□□□ -1.53
HNRNPC-231ENST00000557336 PAM16Q9Y3D7 125 aa5.48□□□□□ -1.53
HNRNPC-231ENST00000557336 FAM236DA0A1B0GTK5 79 aa5.47□□□□□ -1.53
HNRNPC-231ENST00000557336 FAM236CP0DP71 79 aa5.47□□□□□ -1.53
HNRNPC-231ENST00000557336 SPATA45Q537H7 98 aa5.47□□□□□ -1.53
HNRNPC-231ENST00000557336 A0A1B0GV72 72 aa5.46□□□□□ -1.54
HNRNPC-231ENST00000557336 ANKRD29Q8N6D5 301 aa5.46□□□□□ -1.54
HNRNPC-231ENST00000557336 IGKV2-30P06310 120 aa5.45□□□□□ -1.54
HNRNPC-231ENST00000557336 RBM12B-AS1Q9P1G2 102 aa5.45□□□□□ -1.54
HNRNPC-231ENST00000557336 IGHV6-1A0A0B4J1U7 121 aa5.44□□□□□ -1.54
HNRNPC-231ENST00000557336 CCKP06307 115 aa5.42□□□□□ -1.54
HNRNPC-231ENST00000557336 K7ERJ3 54 aa5.41□□□□□ -1.54
HNRNPC-231ENST00000557336 VAMP8Q9BV40 100 aa5.41□□□□□ -1.54
HNRNPC-231ENST00000557336 ORMDL1Q9P0S3 153 aa5.41□□□□□ -1.54
HNRNPC-231ENST00000557336 KRTAP19-6Q3LI70 58 aa5.4□□□□□ -1.54
HNRNPC-231ENST00000557336 A0A1B0GVX0 72 aa5.39□□□□□ -1.55
HNRNPC-231ENST00000557336 TMEM256-PLSCR3K7ERE1 68 aa5.39□□□□□ -1.55
HNRNPC-231ENST00000557336 TRACP01848 142 aa5.39□□□□□ -1.55
HNRNPC-231ENST00000557336 S100A1P23297 94 aa5.39□□□□□ -1.55
HNRNPC-231ENST00000557336 DNAL4O96015 105 aa5.38□□□□□ -1.55
HNRNPC-231ENST00000557336 SPINK7P58062 85 aa5.38□□□□□ -1.55
HNRNPC-231ENST00000557336 SVIPQ8NHG7 77 aa5.38□□□□□ -1.55
HNRNPC-231ENST00000557336 ZCCHC13Q8WW36 166 aaKnown RBP5.38□□□□□ -1.55
HNRNPC-231ENST00000557336 C8orf87E5RJ46 101 aa5.37□□□□□ -1.55
HNRNPC-231ENST00000557336 H3BQ85 93 aa5.37□□□□□ -1.55
HNRNPC-231ENST00000557336 UBE2V1Q13404 147 aa5.37□□□□□ -1.55
HNRNPC-231ENST00000557336 PSMB2P49721 201 aa5.35□□□□□ -1.55
HNRNPC-231ENST00000557336 HSD52Q0P140 79 aa5.34□□□□□ -1.55
HNRNPC-231ENST00000557336 VPS25Q9BRG1 176 aa5.33□□□□□ -1.56
HNRNPC-231ENST00000557336 RBM3P98179 157 aaKnown RBP5.32□□□□□ -1.56
HNRNPC-231ENST00000557336 PYY3Q5JQD4 70 aa5.32□□□□□ -1.56
HNRNPC-231ENST00000557336 MTURNQ8N3F0 131 aa5.32□□□□□ -1.56
HNRNPC-231ENST00000557336 COX6CP09669 75 aa5.31□□□□□ -1.56
HNRNPC-231ENST00000557336 Q6ZQT0 140 aa5.31□□□□□ -1.56
HNRNPC-231ENST00000557336 WFDC13Q8IUB5 93 aa5.3□□□□□ -1.56
HNRNPC-231ENST00000557336 J3KT08 172 aa5.29□□□□□ -1.56
HNRNPC-231ENST00000557336 DSCR8Q96T75 97 aa5.29□□□□□ -1.56
HNRNPC-231ENST00000557336 A8MWP4 228 aa5.28□□□□□ -1.56
HNRNPC-231ENST00000557336 IGKV3D-7A0A0C4DH55 119 aa5.27□□□□□ -1.57
HNRNPC-231ENST00000557336 BAALC-AS2P0C853 105 aa5.27□□□□□ -1.57
HNRNPC-231ENST00000557336 C8orf17Q9NRJ1 99 aa5.27□□□□□ -1.57
HNRNPC-231ENST00000557336 C9JAW5 83 aa5.26□□□□□ -1.57
HNRNPC-231ENST00000557336 KRTAP6-3Q3LI67 103 aa5.25□□□□□ -1.57
HNRNPC-231ENST00000557336 LINC00846Q9NV44 126 aa5.25□□□□□ -1.57
HNRNPC-231ENST00000557336 SCGB1C2P0DMR2 95 aa5.24□□□□□ -1.57
HNRNPC-231ENST00000557336 NDUFB1O75438 58 aa5.23□□□□□ -1.57
HNRNPC-231ENST00000557336 Q6ZVQ6 151 aa5.22□□□□□ -1.57
HNRNPC-231ENST00000557336 UQCR10Q9UDW1 63 aa5.22□□□□□ -1.57
HNRNPC-231ENST00000557336 NEBP20929 6669 aa5.22□□□□□ -1.57
HNRNPC-231ENST00000557336 LOC110117498A0A087WWA1 95 aa5.21□□□□□ -1.58
HNRNPC-231ENST00000557336 PRR15Q8IV56 129 aa5.2□□□□□ -1.58
HNRNPC-231ENST00000557336 MMP24-AS1A0A0U1RRL7 71 aa5.19□□□□□ -1.58
HNRNPC-231ENST00000557336 H1FX-AS1Q4G0G2 97 aa5.19□□□□□ -1.58
HNRNPC-231ENST00000557336 LYRM7Q5U5X0 104 aa5.19□□□□□ -1.58
HNRNPC-231ENST00000557336 IGKV2D-30A0A075B6S6 120 aa5.18□□□□□ -1.58
HNRNPC-231ENST00000557336 A0A0A0MQY5 61 aa5.18□□□□□ -1.58
HNRNPC-231ENST00000557336 A0A1B0GW54 56 aa5.18□□□□□ -1.58
HNRNPC-231ENST00000557336 NAA38Q9BRA0 125 aaKnown RBP5.18□□□□□ -1.58
HNRNPC-231ENST00000557336 MUC12Q9UKN1 5478 aa5.17□□□□□ -1.58
HNRNPC-231ENST00000557336 JMJD7-PLA2G4BH0Y9G9 81 aa5.16□□□□□ -1.58
HNRNPC-231ENST00000557336 TMEM254Q8TBM7 123 aa5.16□□□□□ -1.58
HNRNPC-231ENST00000557336 MRPL34Q9BQ48 92 aaKnown RBP5.16□□□□□ -1.58
HNRNPC-231ENST00000557336 C14orf132Q9NPU4 83 aa5.15□□□□□ -1.59
HNRNPC-231ENST00000557336 Q5W150 140 aa5.14□□□□□ -1.59
HNRNPC-231ENST00000557336 K7EQZ3 153 aa5.13□□□□□ -1.59
HNRNPC-231ENST00000557336 PDE6GP18545 87 aa5.13□□□□□ -1.59
HNRNPC-231ENST00000557336 ATXN8Q156A1 80 aa5.13□□□□□ -1.59
HNRNPC-231ENST00000557336 PCP4P48539 62 aa5.12□□□□□ -1.59
HNRNPC-231ENST00000557336 NREPQ16612 68 aa5.12□□□□□ -1.59
HNRNPC-231ENST00000557336 hDV103S1A0JD37 113 aa5.11□□□□□ -1.59
HNRNPC-231ENST00000557336 MT1BP07438 61 aa5.1□□□□□ -1.59
HNRNPC-231ENST00000557336 KRTAP2-2Q9BYT5 123 aa5.09□□□□□ -1.59
HNRNPC-231ENST00000557336 NDUFS5O43920 106 aa5.07□□□□□ -1.6
HNRNPC-231ENST00000557336 C4orf26Q17RF5 130 aa5.06□□□□□ -1.6
HNRNPC-231ENST00000557336 C7orf65Q6ZTY9 151 aa5.06□□□□□ -1.6
HNRNPC-231ENST00000557336 M0R143 59 aa5.05□□□□□ -1.6
HNRNPC-231ENST00000557336 MDN1Q9NU22 5596 aa5.04□□□□□ -1.6
HNRNPC-231ENST00000557336 KMT2DO14686 5537 aa5.04□□□□□ -1.6
HNRNPC-231ENST00000557336 KRTAP19-8Q3LI54 63 aa5.03□□□□□ -1.6
HNRNPC-231ENST00000557336 Q8N9L7 120 aa5.03□□□□□ -1.6
HNRNPC-231ENST00000557336 A6NN06 94 aa5.02□□□□□ -1.61
HNRNPC-231ENST00000557336 C5orf47Q569G3 176 aa5.02□□□□□ -1.61
HNRNPC-231ENST00000557336 SPRR2GQ9BYE4 73 aa5.02□□□□□ -1.61
HNRNPC-231ENST00000557336 BPY2O14599 106 aa5.01□□□□□ -1.61
HNRNPC-231ENST00000557336 HCG22E2RYF7 251 aa4.99□□□□□ -1.61
HNRNPC-231ENST00000557336 CASC2Q6XLA1 102 aa4.99□□□□□ -1.61
HNRNPC-231ENST00000557336 H3BT86 120 aa4.98□□□□□ -1.61
HNRNPC-231ENST00000557336 KRTAP10-5P60370 271 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms