RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 DEFB1P60022 68 aa0.19□□□□□ -2.38
SUPT16H-206ENST00000556309 KRTAP8-1Q8IUC2 63 aa0.19□□□□□ -2.38
SUPT16H-206ENST00000556309 HIVEP3Q5T1R4 2406 aa0.19□□□□□ -2.38
SUPT16H-206ENST00000556309 CREBBPQ92793 2442 aa0.19□□□□□ -2.38
SUPT16H-206ENST00000556309 NBASA2RRP1 2371 aa0.19□□□□□ -2.38
SUPT16H-206ENST00000556309 APC2O95996 2303 aa0.19□□□□□ -2.38
SUPT16H-206ENST00000556309 BPTFQ12830 3046 aa0.19□□□□□ -2.38
SUPT16H-206ENST00000556309 GVINP1Q7Z2Y8 2422 aa0.18□□□□□ -2.38
SUPT16H-206ENST00000556309 PKD1L2Q7Z442 2459 aa0.18□□□□□ -2.38
SUPT16H-206ENST00000556309 STATHP02808 62 aa0.18□□□□□ -2.38
SUPT16H-206ENST00000556309 KRTAP2-3P0C7H8 128 aa0.18□□□□□ -2.38
SUPT16H-206ENST00000556309 KRTAP2-4Q9BYR9 128 aa0.18□□□□□ -2.38
SUPT16H-206ENST00000556309 KRTAP2-1Q9BYU5 128 aa0.18□□□□□ -2.38
SUPT16H-206ENST00000556309 SPTA1P02549 2419 aa0.18□□□□□ -2.38
SUPT16H-206ENST00000556309 ACACAQ13085 2346 aa0.18□□□□□ -2.38
SUPT16H-206ENST00000556309 ABCA12Q86UK0 2595 aa0.17□□□□□ -2.38
SUPT16H-206ENST00000556309 MT1AP04731 61 aa0.17□□□□□ -2.38
SUPT16H-206ENST00000556309 HTN3P15516 51 aa0.17□□□□□ -2.38
SUPT16H-206ENST00000556309 MAP1BP46821 2468 aaKnown RBP0.17□□□□□ -2.38
SUPT16H-206ENST00000556309 NCOR1O75376 2440 aa0.17□□□□□ -2.38
SUPT16H-206ENST00000556309 ZFHX3Q15911 3703 aa0.17□□□□□ -2.38
SUPT16H-206ENST00000556309 MTORP42345 2549 aa0.17□□□□□ -2.38
SUPT16H-206ENST00000556309 NCOR2Q9Y618 2525 aa0.17□□□□□ -2.38
SUPT16H-206ENST00000556309 FAM186AA6NE01 2351 aa0.16□□□□□ -2.38
SUPT16H-206ENST00000556309 PRM1P04553 51 aa0.16□□□□□ -2.38
SUPT16H-206ENST00000556309 SPRR2EP22531 72 aa0.16□□□□□ -2.38
SUPT16H-206ENST00000556309 CEP290O15078 2479 aa0.16□□□□□ -2.38
SUPT16H-206ENST00000556309 MEGF8Q7Z7M0 2845 aa0.16□□□□□ -2.38
SUPT16H-206ENST00000556309 PIEZO2Q9H5I5 2752 aa0.16□□□□□ -2.38
SUPT16H-206ENST00000556309 SPRR2FQ96RM1 72 aa0.15□□□□□ -2.39
SUPT16H-206ENST00000556309 IGF2RP11717 2491 aa0.15□□□□□ -2.39
SUPT16H-206ENST00000556309 ACANP16112 2415 aa0.15□□□□□ -2.39
SUPT16H-206ENST00000556309 PIEZO1Q92508 2521 aa0.15□□□□□ -2.39
SUPT16H-206ENST00000556309 SSPOA2VEC9 5147 aa0.14□□□□□ -2.39
SUPT16H-206ENST00000556309 CHD8Q9HCK8 2581 aa0.14□□□□□ -2.39
SUPT16H-206ENST00000556309 DMBT1Q9UGM3 2413 aaPredicted RBP0.14□□□□□ -2.39
SUPT16H-206ENST00000556309 MT1EP04732 61 aa0.14□□□□□ -2.39
SUPT16H-206ENST00000556309 MT1HP80294 61 aa0.14□□□□□ -2.39
SUPT16H-206ENST00000556309 SYNE1Q8NF91 8797 aaKnown RBP0.14□□□□□ -2.39
SUPT16H-206ENST00000556309 CACNA1AO00555 2505 aa0.14□□□□□ -2.39
SUPT16H-206ENST00000556309 POLQO75417 2590 aa0.13□□□□□ -2.39
SUPT16H-206ENST00000556309 SPTBN4Q9H254 2564 aa0.13□□□□□ -2.39
SUPT16H-206ENST00000556309 TENM4Q6N022 2769 aa0.13□□□□□ -2.39
SUPT16H-206ENST00000556309 SONP18583 2426 aaKnown RBP0.13□□□□□ -2.39
SUPT16H-206ENST00000556309 CEP250Q9BV73 2442 aa0.13□□□□□ -2.39
SUPT16H-206ENST00000556309 COL6A5A8TX70 2615 aa0.13□□□□□ -2.39
SUPT16H-206ENST00000556309 HECTD1Q9ULT8 2610 aa0.13□□□□□ -2.39
SUPT16H-206ENST00000556309 CHD6Q8TD26 2715 aa0.13□□□□□ -2.39
SUPT16H-206ENST00000556309 DEFB4AO15263 64 aa0.13□□□□□ -2.39
SUPT16H-206ENST00000556309 SMR3BP02814 79 aaPredicted RBP0.13□□□□□ -2.39
SUPT16H-206ENST00000556309 MT1LQ93083 61 aa0.13□□□□□ -2.39
SUPT16H-206ENST00000556309 SPRR2GQ9BYE4 73 aa0.13□□□□□ -2.39
SUPT16H-206ENST00000556309 CCDC168Q8NDH2 2452 aa0.13□□□□□ -2.39
SUPT16H-206ENST00000556309 LRRK2Q5S007 2527 aa0.13□□□□□ -2.39
SUPT16H-206ENST00000556309 ACACBO00763 2458 aa0.12□□□□□ -2.39
SUPT16H-206ENST00000556309 DSTQ03001 7570 aaKnown RBP0.12□□□□□ -2.39
SUPT16H-206ENST00000556309 ANKHD1Q8IWZ3 2542 aaKnown RBP0.12□□□□□ -2.39
SUPT16H-206ENST00000556309 SPG11Q96JI7 2443 aa0.12□□□□□ -2.39
SUPT16H-206ENST00000556309 MT1HL1P0DM35 61 aa0.12□□□□□ -2.39
SUPT16H-206ENST00000556309 KRTAP6-2Q3LI66 62 aa0.12□□□□□ -2.39
SUPT16H-206ENST00000556309 KRTAP19-5Q3LI72 72 aa0.12□□□□□ -2.39
SUPT16H-206ENST00000556309 SETD2Q9BYW2 2564 aaPredicted RBP0.12□□□□□ -2.39
SUPT16H-206ENST00000556309 RIF1Q5UIP0 2472 aaKnown RBP0.12□□□□□ -2.39
SUPT16H-206ENST00000556309 DOPEY1Q5JWR5 2465 aa0.11□□□□□ -2.39
SUPT16H-206ENST00000556309 BDP1A6H8Y1 2624 aa0.11□□□□□ -2.39
SUPT16H-206ENST00000556309 ZFYVE26Q68DK2 2539 aa0.11□□□□□ -2.39
SUPT16H-206ENST00000556309 MT1XP80297 61 aa0.11□□□□□ -2.39
SUPT16H-206ENST00000556309 EPG5Q9HCE0 2579 aa0.11□□□□□ -2.39
SUPT16H-206ENST00000556309 MGAM2Q2M2H8 2515 aa0.11□□□□□ -2.39
SUPT16H-206ENST00000556309 TLN2Q9Y4G6 2542 aa0.1□□□□□ -2.39
SUPT16H-206ENST00000556309 MT2AP02795 61 aa0.1□□□□□ -2.39
SUPT16H-206ENST00000556309 MT1GP13640 62 aa0.1□□□□□ -2.39
SUPT16H-206ENST00000556309 KRTAP19-8Q3LI54 63 aa0.1□□□□□ -2.39
SUPT16H-206ENST00000556309 STAB1Q9NY15 2570 aa0.1□□□□□ -2.39
SUPT16H-206ENST00000556309 PRRC2CQ9Y520 2896 aaKnown RBP0.1□□□□□ -2.39
SUPT16H-206ENST00000556309 FLNBO75369 2602 aaKnown RBP0.1□□□□□ -2.39
SUPT16H-206ENST00000556309 FASNP49327 2511 aaKnown RBP0.1□□□□□ -2.39
SUPT16H-206ENST00000556309 CELSR2Q9HCU4 2923 aa0.1□□□□□ -2.39
SUPT16H-206ENST00000556309 ZNF292O60281 2723 aa0.09□□□□□ -2.39
SUPT16H-206ENST00000556309 TEP1Q99973 2627 aaKnown RBP0.09□□□□□ -2.39
SUPT16H-206ENST00000556309 NSD1Q96L73 2696 aaPredicted RBP0.09□□□□□ -2.39
SUPT16H-206ENST00000556309 VWFP04275 2813 aa0.09□□□□□ -2.39
SUPT16H-206ENST00000556309 MT1MQ8N339 61 aa0.09□□□□□ -2.4
SUPT16H-206ENST00000556309 FLNCQ14315 2725 aa0.09□□□□□ -2.4
SUPT16H-206ENST00000556309 UNC79Q9P2D8 2635 aa0.09□□□□□ -2.4
SUPT16H-206ENST00000556309 TGP01266 2768 aa0.09□□□□□ -2.4
SUPT16H-206ENST00000556309 OTOGQ6ZRI0 2925 aa0.09□□□□□ -2.4
SUPT16H-206ENST00000556309 DSPP15924 2871 aaKnown RBP0.08□□□□□ -2.4
SUPT16H-206ENST00000556309 TRANK1O15050 2925 aa0.08□□□□□ -2.4
SUPT16H-206ENST00000556309 ATRQ13535 2644 aa0.08□□□□□ -2.4
SUPT16H-206ENST00000556309 SPTAN1Q13813 2472 aaKnown RBP0.08□□□□□ -2.4
SUPT16H-206ENST00000556309 AKAP13Q12802 2813 aa0.08□□□□□ -2.4
SUPT16H-206ENST00000556309 CENPEQ02224 2701 aa0.08□□□□□ -2.4
SUPT16H-206ENST00000556309 MYO18BQ8IUG5 2567 aa0.08□□□□□ -2.4
SUPT16H-206ENST00000556309 USP9XQ93008 2570 aaPredicted RBP0.08□□□□□ -2.4
SUPT16H-206ENST00000556309 REV3LO60673 3130 aa0.08□□□□□ -2.4
SUPT16H-206ENST00000556309 TNXBP22105 4242 aa0.08□□□□□ -2.4
SUPT16H-206ENST00000556309 IGSF10Q6WRI0 2623 aa0.07□□□□□ -2.4
SUPT16H-206ENST00000556309 NBEAL1Q6ZS30 2694 aa0.07□□□□□ -2.4
SUPT16H-206ENST00000556309 SETXQ7Z333 2677 aaKnown RBP0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms