RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 C8orf87E5RJ46 101 aa6.31□□□□□ -1.4
SHMT2-220ENST00000555634 A0A1B0GVX0 72 aa6.3□□□□□ -1.4
SHMT2-220ENST00000555634 HIST1H4AP62805 103 aaKnown RBP6.29□□□□□ -1.4
SHMT2-220ENST00000555634 IGKV3D-7A0A0C4DH55 119 aa6.28□□□□□ -1.4
SHMT2-220ENST00000555634 K7EQZ3 153 aa6.27□□□□□ -1.41
SHMT2-220ENST00000555634 PRR15Q8IV56 129 aa6.27□□□□□ -1.41
SHMT2-220ENST00000555634 HMCN2Q8NDA2 5059 aa6.26□□□□□ -1.41
SHMT2-220ENST00000555634 DSCR10P59022 87 aa6.26□□□□□ -1.41
SHMT2-220ENST00000555634 LINC00313P59037 77 aa6.26□□□□□ -1.41
SHMT2-220ENST00000555634 CDIP1Q9H305 208 aa6.26□□□□□ -1.41
SHMT2-220ENST00000555634 TPRXLQ17RH7 258 aa6.25□□□□□ -1.41
SHMT2-220ENST00000555634 TNXBP22105 4242 aa6.23□□□□□ -1.41
SHMT2-220ENST00000555634 C9orf92A6NGG3 77 aa6.23□□□□□ -1.41
SHMT2-220ENST00000555634 Q8N9L7 120 aa6.23□□□□□ -1.41
SHMT2-220ENST00000555634 C8orf17Q9NRJ1 99 aa6.23□□□□□ -1.41
SHMT2-220ENST00000555634 RNF213Q63HN8 5207 aa6.22□□□□□ -1.41
SHMT2-220ENST00000555634 HCG22E2RYF7 251 aa6.22□□□□□ -1.41
SHMT2-220ENST00000555634 CASC2Q6XLA1 102 aa6.22□□□□□ -1.41
SHMT2-220ENST00000555634 IMUPQ9GZP8 106 aa6.22□□□□□ -1.41
SHMT2-220ENST00000555634 hDV103S1A0JD37 113 aa6.21□□□□□ -1.42
SHMT2-220ENST00000555634 KRTAP13-3Q3SY46 172 aa6.2□□□□□ -1.42
SHMT2-220ENST00000555634 TMEM254Q8TBM7 123 aa6.2□□□□□ -1.42
SHMT2-220ENST00000555634 MMP24-AS1A0A0U1RRL7 71 aa6.19□□□□□ -1.42
SHMT2-220ENST00000555634 WFDC13Q8IUB5 93 aa6.19□□□□□ -1.42
SHMT2-220ENST00000555634 NDUFS5O43920 106 aa6.18□□□□□ -1.42
SHMT2-220ENST00000555634 MT-ATP8P03928 68 aa6.17□□□□□ -1.42
SHMT2-220ENST00000555634 MRPL34Q9BQ48 92 aaKnown RBP6.17□□□□□ -1.42
SHMT2-220ENST00000555634 SCGB1A1P11684 91 aa6.15□□□□□ -1.42
SHMT2-220ENST00000555634 A0A087WVE0 104 aa6.14□□□□□ -1.43
SHMT2-220ENST00000555634 XP32Q5T750 250 aa6.13□□□□□ -1.43
SHMT2-220ENST00000555634 ATP11AUNQ6ZP68 121 aa6.12□□□□□ -1.43
SHMT2-220ENST00000555634 Q75L30 129 aa6.12□□□□□ -1.43
SHMT2-220ENST00000555634 NOTCH2NLQ7Z3S9 236 aa6.12□□□□□ -1.43
SHMT2-220ENST00000555634 KRTAP9-6A0A140TA67 174 aa6.11□□□□□ -1.43
SHMT2-220ENST00000555634 C20orf166-AS1Q96NR2 134 aa6.11□□□□□ -1.43
SHMT2-220ENST00000555634 TP53AIP1Q9HCN2 124 aa6.11□□□□□ -1.43
SHMT2-220ENST00000555634 FAM236AA0A1B0GUQ0 79 aa6.1□□□□□ -1.43
SHMT2-220ENST00000555634 FAM236BA0A1B0GV22 79 aa6.1□□□□□ -1.43
SHMT2-220ENST00000555634 KRTAP16-1A8MUX0 517 aa6.1□□□□□ -1.43
SHMT2-220ENST00000555634 SEC61BP60468 96 aaKnown RBP6.1□□□□□ -1.43
SHMT2-220ENST00000555634 RPL37P61927 97 aaKnown RBP6.1□□□□□ -1.43
SHMT2-220ENST00000555634 SMIM20Q8N5G0 67 aa6.09□□□□□ -1.43
SHMT2-220ENST00000555634 Q8N9P0 234 aaPredicted RBP6.09□□□□□ -1.43
SHMT2-220ENST00000555634 KRTAP9-2Q9BYQ4 174 aa6.09□□□□□ -1.43
SHMT2-220ENST00000555634 A8MUU9 505 aa6.08□□□□□ -1.44
SHMT2-220ENST00000555634 ATOX1O00244 68 aa6.08□□□□□ -1.44
SHMT2-220ENST00000555634 UQCRQO14949 82 aa6.04□□□□□ -1.44
SHMT2-220ENST00000555634 ZCCHC13Q8WW36 166 aaKnown RBP6.04□□□□□ -1.44
SHMT2-220ENST00000555634 TRAV22A0A0B4J277 110 aa6.02□□□□□ -1.45
SHMT2-220ENST00000555634 MP68P56378 58 aa6.01□□□□□ -1.45
SHMT2-220ENST00000555634 PCOTHQ58A44 107 aa5.99□□□□□ -1.45
SHMT2-220ENST00000555634 TRAV7A0A075B6U4 112 aa5.98□□□□□ -1.45
SHMT2-220ENST00000555634 H0Y9P7 68 aa5.97□□□□□ -1.45
SHMT2-220ENST00000555634 C5orf47Q569G3 176 aa5.97□□□□□ -1.45
SHMT2-220ENST00000555634 OCR1Q9BZK8 76 aa5.97□□□□□ -1.45
SHMT2-220ENST00000555634 C7orf65Q6ZTY9 151 aa5.96□□□□□ -1.46
SHMT2-220ENST00000555634 H3BPC8 53 aa5.95□□□□□ -1.46
SHMT2-220ENST00000555634 ANAPC13Q9BS18 74 aa5.95□□□□□ -1.46
SHMT2-220ENST00000555634 LOC101927531A0A1B0GV80 90 aa5.94□□□□□ -1.46
SHMT2-220ENST00000555634 SERP2Q8N6R1 65 aa5.94□□□□□ -1.46
SHMT2-220ENST00000555634 LRP2P98164 4655 aa5.94□□□□□ -1.46
SHMT2-220ENST00000555634 IGKV2D-30A0A075B6S6 120 aa5.93□□□□□ -1.46
SHMT2-220ENST00000555634 IGKV2-30P06310 120 aa5.93□□□□□ -1.46
SHMT2-220ENST00000555634 Q5W150 140 aa5.93□□□□□ -1.46
SHMT2-220ENST00000555634 MUC2Q02817 5179 aa5.93□□□□□ -1.46
SHMT2-220ENST00000555634 FAT4Q6V0I7 4981 aa5.9□□□□□ -1.46
SHMT2-220ENST00000555634 C1orf64Q8NEQ6 169 aa5.9□□□□□ -1.46
SHMT2-220ENST00000555634 LINC00208Q96KT6 92 aa5.9□□□□□ -1.46
SHMT2-220ENST00000555634 LPAP08519 4548 aa5.88□□□□□ -1.47
SHMT2-220ENST00000555634 SPINK7P58062 85 aa5.88□□□□□ -1.47
SHMT2-220ENST00000555634 COX7CP15954 63 aa5.86□□□□□ -1.47
SHMT2-220ENST00000555634 RBM12B-AS1Q9P1G2 102 aa5.86□□□□□ -1.47
SHMT2-220ENST00000555634 A0A0U1RQV1 116 aa5.84□□□□□ -1.47
SHMT2-220ENST00000555634 C20orf197Q8N268 126 aa5.84□□□□□ -1.47
SHMT2-220ENST00000555634 CYP4F30PQ9H0H9 118 aa5.83□□□□□ -1.48
SHMT2-220ENST00000555634 FAM236DA0A1B0GTK5 79 aa5.82□□□□□ -1.48
SHMT2-220ENST00000555634 FAM236CP0DP71 79 aa5.82□□□□□ -1.48
SHMT2-220ENST00000555634 COX6B2Q6YFQ2 88 aa5.8□□□□□ -1.48
SHMT2-220ENST00000555634 NDUFC1O43677 76 aa5.79□□□□□ -1.48
SHMT2-220ENST00000555634 KLKP1Q107X0 134 aa5.79□□□□□ -1.48
SHMT2-220ENST00000555634 SNURFQ9Y675 71 aa5.79□□□□□ -1.48
SHMT2-220ENST00000555634 HRES1P13985 223 aa5.74□□□□□ -1.49
SHMT2-220ENST00000555634 C4orf26Q17RF5 130 aa5.74□□□□□ -1.49
SHMT2-220ENST00000555634 FSIP2Q5CZC0 6907 aa5.73□□□□□ -1.49
SHMT2-220ENST00000555634 A8MUN3 132 aa5.72□□□□□ -1.49
SHMT2-220ENST00000555634 KRTAP4-1Q9BYQ7 146 aa5.72□□□□□ -1.49
SHMT2-220ENST00000555634 CCDC179H3BU77 68 aa5.69□□□□□ -1.5
SHMT2-220ENST00000555634 SPANXA2-OT1Q8N9U9 137 aa5.69□□□□□ -1.5
SHMT2-220ENST00000555634 MUC17Q685J3 4493 aa5.68□□□□□ -1.5
SHMT2-220ENST00000555634 PCP4P48539 62 aa5.67□□□□□ -1.5
SHMT2-220ENST00000555634 MPLKIPQ8TAP9 179 aa5.67□□□□□ -1.5
SHMT2-220ENST00000555634 ATP5EP56381 51 aaPredicted RBP5.66□□□□□ -1.5
SHMT2-220ENST00000555634 H1FX-AS1Q4G0G2 97 aa5.65□□□□□ -1.5
SHMT2-220ENST00000555634 H7BZZ5 65 aa5.64□□□□□ -1.51
SHMT2-220ENST00000555634 DMAC1Q96GE9 116 aa5.64□□□□□ -1.51
SHMT2-220ENST00000555634 ACYP2P14621 99 aa5.63□□□□□ -1.51
SHMT2-220ENST00000555634 TMEM258P61165 79 aa5.63□□□□□ -1.51
SHMT2-220ENST00000555634 S4R3F8 94 aa5.61□□□□□ -1.51
SHMT2-220ENST00000555634 CHKB-CPT1BH3BT56 60 aa5.6□□□□□ -1.51
SHMT2-220ENST00000555634 CRCT1Q9UGL9 99 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms