RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 A0A1B0GVX0 72 aa9.75□□□□□ -0.85
LETMD1-220ENST00000549686 K7EQZ3 153 aa9.73□□□□□ -0.85
LETMD1-220ENST00000549686 IMUPQ9GZP8 106 aa9.73□□□□□ -0.85
LETMD1-220ENST00000549686 C8orf87E5RJ46 101 aa9.72□□□□□ -0.85
LETMD1-220ENST00000549686 MT-ATP8P03928 68 aa9.71□□□□□ -0.86
LETMD1-220ENST00000549686 IGLV7-46A0A075B6I9 117 aa9.7□□□□□ -0.86
LETMD1-220ENST00000549686 IGHV6-1A0A0B4J1U7 121 aa9.7□□□□□ -0.86
LETMD1-220ENST00000549686 HIST1H4AP62805 103 aaKnown RBP9.69□□□□□ -0.86
LETMD1-220ENST00000549686 Q8N9L7 120 aa9.69□□□□□ -0.86
LETMD1-220ENST00000549686 PRR4Q16378 134 aa9.68□□□□□ -0.86
LETMD1-220ENST00000549686 LINC00313P59037 77 aa9.66□□□□□ -0.86
LETMD1-220ENST00000549686 C8orf17Q9NRJ1 99 aa9.66□□□□□ -0.86
LETMD1-220ENST00000549686 HCG22E2RYF7 251 aa9.63□□□□□ -0.87
LETMD1-220ENST00000549686 MMP24-AS1A0A0U1RRL7 71 aa9.61□□□□□ -0.87
LETMD1-220ENST00000549686 TPRXLQ17RH7 258 aa9.6□□□□□ -0.87
LETMD1-220ENST00000549686 hDV103S1A0JD37 113 aa9.59□□□□□ -0.87
LETMD1-220ENST00000549686 KRTAP13-3Q3SY46 172 aa9.59□□□□□ -0.87
LETMD1-220ENST00000549686 CASC2Q6XLA1 102 aa9.59□□□□□ -0.87
LETMD1-220ENST00000549686 A0A087WVE0 104 aa9.58□□□□□ -0.88
LETMD1-220ENST00000549686 NOTCH2NLQ7Z3S9 236 aa9.58□□□□□ -0.88
LETMD1-220ENST00000549686 TMEM254Q8TBM7 123 aa9.58□□□□□ -0.88
LETMD1-220ENST00000549686 C9orf92A6NGG3 77 aa9.56□□□□□ -0.88
LETMD1-220ENST00000549686 WFDC13Q8IUB5 93 aa9.55□□□□□ -0.88
LETMD1-220ENST00000549686 MRPL34Q9BQ48 92 aaKnown RBP9.55□□□□□ -0.88
LETMD1-220ENST00000549686 KRTAP16-1A8MUX0 517 aa9.53□□□□□ -0.88
LETMD1-220ENST00000549686 HERC1Q15751 4861 aa9.51□□□□□ -0.89
LETMD1-220ENST00000549686 Q8N9P0 234 aaPredicted RBP9.5□□□□□ -0.89
LETMD1-220ENST00000549686 FAM236AA0A1B0GUQ0 79 aa9.48□□□□□ -0.89
LETMD1-220ENST00000549686 FAM236BA0A1B0GV22 79 aa9.48□□□□□ -0.89
LETMD1-220ENST00000549686 C20orf166-AS1Q96NR2 134 aa9.48□□□□□ -0.89
LETMD1-220ENST00000549686 SCGB1A1P11684 91 aa9.47□□□□□ -0.89
LETMD1-220ENST00000549686 A8MUU9 505 aa9.46□□□□□ -0.9
LETMD1-220ENST00000549686 XP32Q5T750 250 aa9.46□□□□□ -0.9
LETMD1-220ENST00000549686 Q75L30 129 aa9.46□□□□□ -0.9
LETMD1-220ENST00000549686 TP53AIP1Q9HCN2 124 aa9.44□□□□□ -0.9
LETMD1-220ENST00000549686 NDUFS5O43920 106 aa9.43□□□□□ -0.9
LETMD1-220ENST00000549686 HMCN2Q8NDA2 5059 aa9.43□□□□□ -0.9
LETMD1-220ENST00000549686 SMIM20Q8N5G0 67 aa9.42□□□□□ -0.9
LETMD1-220ENST00000549686 ATOX1O00244 68 aa9.41□□□□□ -0.9
LETMD1-220ENST00000549686 RPL37P61927 97 aaKnown RBP9.4□□□□□ -0.9
LETMD1-220ENST00000549686 UQCRQO14949 82 aa9.37□□□□□ -0.91
LETMD1-220ENST00000549686 OCR1Q9BZK8 76 aa9.37□□□□□ -0.91
LETMD1-220ENST00000549686 ATP11AUNQ6ZP68 121 aa9.34□□□□□ -0.91
LETMD1-220ENST00000549686 ZCCHC13Q8WW36 166 aaKnown RBP9.33□□□□□ -0.92
LETMD1-220ENST00000549686 TRAV7A0A075B6U4 112 aa9.32□□□□□ -0.92
LETMD1-220ENST00000549686 LPAP08519 4548 aa9.31□□□□□ -0.92
LETMD1-220ENST00000549686 SEC61BP60468 96 aaKnown RBP9.3□□□□□ -0.92
LETMD1-220ENST00000549686 TRAV22A0A0B4J277 110 aa9.28□□□□□ -0.92
LETMD1-220ENST00000549686 C5orf47Q569G3 176 aa9.28□□□□□ -0.92
LETMD1-220ENST00000549686 SERP2Q8N6R1 65 aa9.27□□□□□ -0.93
LETMD1-220ENST00000549686 LRP2P98164 4655 aa9.26□□□□□ -0.93
LETMD1-220ENST00000549686 MP68P56378 58 aa9.25□□□□□ -0.93
LETMD1-220ENST00000549686 Q5W150 140 aa9.24□□□□□ -0.93
LETMD1-220ENST00000549686 ANAPC13Q9BS18 74 aa9.23□□□□□ -0.93
LETMD1-220ENST00000549686 H0Y9P7 68 aa9.22□□□□□ -0.93
LETMD1-220ENST00000549686 H3BPC8 53 aa9.22□□□□□ -0.93
LETMD1-220ENST00000549686 PCOTHQ58A44 107 aa9.22□□□□□ -0.93
LETMD1-220ENST00000549686 LOC101927531A0A1B0GV80 90 aa9.17□□□□□ -0.94
LETMD1-220ENST00000549686 COX7CP15954 63 aa9.17□□□□□ -0.94
LETMD1-220ENST00000549686 MUC17Q685J3 4493 aa9.16□□□□□ -0.94
LETMD1-220ENST00000549686 IGKV2-30P06310 120 aa9.14□□□□□ -0.95
LETMD1-220ENST00000549686 C7orf65Q6ZTY9 151 aa9.13□□□□□ -0.95
LETMD1-220ENST00000549686 C1orf64Q8NEQ6 169 aa9.13□□□□□ -0.95
LETMD1-220ENST00000549686 LINC00208Q96KT6 92 aa9.13□□□□□ -0.95
LETMD1-220ENST00000549686 IGKV2D-30A0A075B6S6 120 aa9.1□□□□□ -0.95
LETMD1-220ENST00000549686 SPINK7P58062 85 aa9.1□□□□□ -0.95
LETMD1-220ENST00000549686 A0A0U1RQV1 116 aa9.09□□□□□ -0.95
LETMD1-220ENST00000549686 C20orf197Q8N268 126 aa9.08□□□□□ -0.96
LETMD1-220ENST00000549686 CYP4F30PQ9H0H9 118 aa9.08□□□□□ -0.96
LETMD1-220ENST00000549686 KLKP1Q107X0 134 aa9.05□□□□□ -0.96
LETMD1-220ENST00000549686 SNURFQ9Y675 71 aa9.01□□□□□ -0.97
LETMD1-220ENST00000549686 NDUFC1O43677 76 aa8.98□□□□□ -0.97
LETMD1-220ENST00000549686 CCDC179H3BU77 68 aa8.97□□□□□ -0.97
LETMD1-220ENST00000549686 UBR4Q5T4S7 5183 aa8.95□□□□□ -0.98
LETMD1-220ENST00000549686 KRTAP4-1Q9BYQ7 146 aa8.95□□□□□ -0.98
LETMD1-220ENST00000549686 HRES1P13985 223 aa8.94□□□□□ -0.98
LETMD1-220ENST00000549686 PCP4P48539 62 aa8.93□□□□□ -0.98
LETMD1-220ENST00000549686 RBM12B-AS1Q9P1G2 102 aa8.91□□□□□ -0.98
LETMD1-220ENST00000549686 MPLKIPQ8TAP9 179 aa8.89□□□□□ -0.99
LETMD1-220ENST00000549686 C4orf26Q17RF5 130 aa8.86□□□□□ -0.99
LETMD1-220ENST00000549686 SPANXA2-OT1Q8N9U9 137 aa8.86□□□□□ -0.99
LETMD1-220ENST00000549686 RNF213Q63HN8 5207 aa8.85□□□□□ -0.99
LETMD1-220ENST00000549686 H7BZZ5 65 aa8.85□□□□□ -0.99
LETMD1-220ENST00000549686 COX6B2Q6YFQ2 88 aa8.85□□□□□ -0.99
LETMD1-220ENST00000549686 CYSTM1Q9H1C7 97 aa8.84□□□□□ -0.99
LETMD1-220ENST00000549686 A8MUN3 132 aa8.81□□□□□ -1
LETMD1-220ENST00000549686 FAM236DA0A1B0GTK5 79 aa8.79□□□□□ -1
LETMD1-220ENST00000549686 FAM236CP0DP71 79 aa8.79□□□□□ -1
LETMD1-220ENST00000549686 MUC2Q02817 5179 aa8.77□□□□□ -1
LETMD1-220ENST00000549686 DMAC1Q96GE9 116 aa8.76□□□□□ -1.01
LETMD1-220ENST00000549686 ATP5EP56381 51 aaPredicted RBP8.74□□□□□ -1.01
LETMD1-220ENST00000549686 TMEM258P61165 79 aa8.74□□□□□ -1.01
LETMD1-220ENST00000549686 H1FX-AS1Q4G0G2 97 aa8.72□□□□□ -1.01
LETMD1-220ENST00000549686 KRTAP3-1Q9BYR8 98 aa8.72□□□□□ -1.01
LETMD1-220ENST00000549686 KRTAP19-2Q3LHN2 52 aa8.7□□□□□ -1.02
LETMD1-220ENST00000549686 ACYP2P14621 99 aa8.69□□□□□ -1.02
LETMD1-220ENST00000549686 LCE2CQ5TA81 110 aa8.61□□□□□ -1.03
LETMD1-220ENST00000549686 S4R3F8 94 aa8.59□□□□□ -1.03
LETMD1-220ENST00000549686 FAT4Q6V0I7 4981 aa8.59□□□□□ -1.03
LETMD1-220ENST00000549686 FLGP20930 4061 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms