RNA–Protein interactions for RNA: ENST00000548878.6

ARPC3-208, Transcript of actin related protein 2/3 complex subunit 3, humanhuman

TSL 5

Gene ARPC3, Length 532 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC3-208ENST00000548878 SRRM2Q9UQ35 2752 aaKnown RBP0.53□□□□□ -2.32
ARPC3-208ENST00000548878 FAM186AA6NE01 2351 aa0.53□□□□□ -2.33
ARPC3-208ENST00000548878 MAP1BP46821 2468 aaKnown RBP0.53□□□□□ -2.33
ARPC3-208ENST00000548878 RIF1Q5UIP0 2472 aaKnown RBP0.53□□□□□ -2.33
ARPC3-208ENST00000548878 PIEZO1Q92508 2521 aa0.53□□□□□ -2.33
ARPC3-208ENST00000548878 SPTBN4Q9H254 2564 aa0.52□□□□□ -2.33
ARPC3-208ENST00000548878 NBASA2RRP1 2371 aa0.52□□□□□ -2.33
ARPC3-208ENST00000548878 DEFB108AA8MXU0 73 aa0.52□□□□□ -2.33
ARPC3-208ENST00000548878 AKAP13Q12802 2813 aa0.52□□□□□ -2.33
ARPC3-208ENST00000548878 CHD7Q9P2D1 2997 aa0.51□□□□□ -2.33
ARPC3-208ENST00000548878 CSMD3Q7Z407 3707 aa0.51□□□□□ -2.33
ARPC3-208ENST00000548878 C9orf92A6NGG3 77 aa0.51□□□□□ -2.33
ARPC3-208ENST00000548878 USP9YO00507 2555 aaPredicted RBP0.51□□□□□ -2.33
ARPC3-208ENST00000548878 CHD6Q8TD26 2715 aa0.51□□□□□ -2.33
ARPC3-208ENST00000548878 TENM2Q9NT68 2774 aa0.51□□□□□ -2.33
ARPC3-208ENST00000548878 MUC5BQ9HC84 5762 aaPredicted RBP0.51□□□□□ -2.33
ARPC3-208ENST00000548878 FLNCQ14315 2725 aa0.51□□□□□ -2.33
ARPC3-208ENST00000548878 FRAS1Q86XX4 4008 aa0.5□□□□□ -2.33
ARPC3-208ENST00000548878 MGAQ8IWI9 3026 aa0.5□□□□□ -2.33
ARPC3-208ENST00000548878 UTP20O75691 2785 aaKnown RBP0.5□□□□□ -2.33
ARPC3-208ENST00000548878 NSD1Q96L73 2696 aaPredicted RBP0.5□□□□□ -2.33
ARPC3-208ENST00000548878 CHD8Q9HCK8 2581 aa0.5□□□□□ -2.33
ARPC3-208ENST00000548878 CACNA1AO00555 2505 aa0.5□□□□□ -2.33
ARPC3-208ENST00000548878 LRRK2Q5S007 2527 aa0.5□□□□□ -2.33
ARPC3-208ENST00000548878 CCDC168Q8NDH2 2452 aa0.5□□□□□ -2.33
ARPC3-208ENST00000548878 ZFYVE26Q68DK2 2539 aa0.49□□□□□ -2.33
ARPC3-208ENST00000548878 HIVEP3Q5T1R4 2406 aa0.49□□□□□ -2.33
ARPC3-208ENST00000548878 DMBT1Q9UGM3 2413 aaPredicted RBP0.49□□□□□ -2.33
ARPC3-208ENST00000548878 H3BNG1 76 aa0.49□□□□□ -2.33
ARPC3-208ENST00000548878 DEFB124Q8NES8 71 aa0.49□□□□□ -2.33
ARPC3-208ENST00000548878 RHPN1-AS1Q9BWJ2 59 aa0.49□□□□□ -2.33
ARPC3-208ENST00000548878 ANKHD1Q8IWZ3 2542 aaKnown RBP0.49□□□□□ -2.33
ARPC3-208ENST00000548878 ITPR3Q14573 2671 aa0.49□□□□□ -2.33
ARPC3-208ENST00000548878 TNRC18O15417 2968 aaPredicted RBP0.48□□□□□ -2.33
ARPC3-208ENST00000548878 EP300Q09472 2414 aaPredicted RBP0.48□□□□□ -2.33
ARPC3-208ENST00000548878 NF1P21359 2839 aa0.48□□□□□ -2.33
ARPC3-208ENST00000548878 CRYBG3Q68DQ2 2970 aa0.48□□□□□ -2.33
ARPC3-208ENST00000548878 ACANP16112 2415 aa0.48□□□□□ -2.33
ARPC3-208ENST00000548878 PTPN13Q12923 2485 aa0.47□□□□□ -2.33
ARPC3-208ENST00000548878 ANK2Q01484 3957 aa0.47□□□□□ -2.33
ARPC3-208ENST00000548878 COL6A5A8TX70 2615 aa0.47□□□□□ -2.33
ARPC3-208ENST00000548878 TNP1P09430 55 aa0.47□□□□□ -2.33
ARPC3-208ENST00000548878 RPS29P62273 56 aaKnown RBP0.47□□□□□ -2.33
ARPC3-208ENST00000548878 MAP1AP78559 2803 aaPredicted RBP0.47□□□□□ -2.33
ARPC3-208ENST00000548878 NIPBLQ6KC79 2804 aaeCLIP0.47□□□□□ -2.33
ARPC3-208ENST00000548878 LRBAP50851 2863 aa0.46□□□□□ -2.34
ARPC3-208ENST00000548878 DEFB104AQ8WTQ1 72 aa0.46□□□□□ -2.34
ARPC3-208ENST00000548878 ITPR1Q14643 2758 aa0.46□□□□□ -2.34
ARPC3-208ENST00000548878 HIVEP1P15822 2718 aa0.46□□□□□ -2.34
ARPC3-208ENST00000548878 MYO18BQ8IUG5 2567 aa0.46□□□□□ -2.34
ARPC3-208ENST00000548878 TEX15Q9BXT5 2789 aa0.45□□□□□ -2.34
ARPC3-208ENST00000548878 MTORP42345 2549 aa0.45□□□□□ -2.34
ARPC3-208ENST00000548878 NBEAQ8NFP9 2946 aa0.45□□□□□ -2.34
ARPC3-208ENST00000548878 ANKRD11Q6UB99 2663 aaPredicted RBP0.45□□□□□ -2.34
ARPC3-208ENST00000548878 UNC79Q9P2D8 2635 aa0.45□□□□□ -2.34
ARPC3-208ENST00000548878 CELSR1Q9NYQ6 3014 aa0.45□□□□□ -2.34
ARPC3-208ENST00000548878 CFAP46Q8IYW2 2715 aa0.45□□□□□ -2.34
ARPC3-208ENST00000548878 SETXQ7Z333 2677 aaKnown RBP0.45□□□□□ -2.34
ARPC3-208ENST00000548878 WDR87Q6ZQQ6 2873 aa0.45□□□□□ -2.34
ARPC3-208ENST00000548878 SONP18583 2426 aaKnown RBP0.45□□□□□ -2.34
ARPC3-208ENST00000548878 FLNBO75369 2602 aaKnown RBP0.45□□□□□ -2.34
ARPC3-208ENST00000548878 LAMA5O15230 3695 aa0.44□□□□□ -2.34
ARPC3-208ENST00000548878 FRYLO94915 3013 aa0.44□□□□□ -2.34
ARPC3-208ENST00000548878 SPG11Q96JI7 2443 aa0.44□□□□□ -2.34
ARPC3-208ENST00000548878 USP9XQ93008 2570 aaPredicted RBP0.44□□□□□ -2.34
ARPC3-208ENST00000548878 AHNAKQ09666 5890 aaKnown RBP0.44□□□□□ -2.34
ARPC3-208ENST00000548878 PRM1P04553 51 aa0.44□□□□□ -2.34
ARPC3-208ENST00000548878 LINC01556Q5JQF7 62 aa0.44□□□□□ -2.34
ARPC3-208ENST00000548878 KRTAP8-1Q8IUC2 63 aa0.44□□□□□ -2.34
ARPC3-208ENST00000548878 ITPR2Q14571 2701 aa0.44□□□□□ -2.34
ARPC3-208ENST00000548878 FRYQ5TBA9 3013 aa0.43□□□□□ -2.34
ARPC3-208ENST00000548878 GCN1Q92616 2671 aaKnown RBP0.43□□□□□ -2.34
ARPC3-208ENST00000548878 CELSR3Q9NYQ7 3312 aa0.43□□□□□ -2.34
ARPC3-208ENST00000548878 TRIOO75962 3097 aa0.43□□□□□ -2.34
ARPC3-208ENST00000548878 APELAP0DMC3 54 aa0.43□□□□□ -2.34
ARPC3-208ENST00000548878 KRTAP21-1Q3LI58 79 aa0.43□□□□□ -2.34
ARPC3-208ENST00000548878 NBEAL1Q6ZS30 2694 aa0.43□□□□□ -2.34
ARPC3-208ENST00000548878 NBEAL2Q6ZNJ1 2754 aa0.43□□□□□ -2.34
ARPC3-208ENST00000548878 TACC2O95359 2948 aa0.43□□□□□ -2.34
ARPC3-208ENST00000548878 COL12A1Q99715 3063 aa0.43□□□□□ -2.34
ARPC3-208ENST00000548878 SRCAPQ6ZRS2 3230 aa0.43□□□□□ -2.34
ARPC3-208ENST00000548878 HTTP42858 3142 aa0.42□□□□□ -2.34
ARPC3-208ENST00000548878 CEP350Q5VT06 3117 aa0.42□□□□□ -2.34
ARPC3-208ENST00000548878 CEP295Q9C0D2 2601 aa0.42□□□□□ -2.34
ARPC3-208ENST00000548878 DOPEY1Q5JWR5 2465 aa0.42□□□□□ -2.34
ARPC3-208ENST00000548878 ZFHX4Q86UP3 3567 aa0.42□□□□□ -2.34
ARPC3-208ENST00000548878 SPART-AS1P0CW21 52 aa0.42□□□□□ -2.34
ARPC3-208ENST00000548878 SPRR2DP22532 72 aa0.42□□□□□ -2.34
ARPC3-208ENST00000548878 PDZD2O15018 2839 aa0.42□□□□□ -2.34
ARPC3-208ENST00000548878 PKD1L1Q8TDX9 2849 aa0.42□□□□□ -2.34
ARPC3-208ENST00000548878 FASNP49327 2511 aaKnown RBP0.42□□□□□ -2.34
ARPC3-208ENST00000548878 TLN1Q9Y490 2541 aaKnown RBP0.42□□□□□ -2.34
ARPC3-208ENST00000548878 TLN2Q9Y4G6 2542 aa0.42□□□□□ -2.34
ARPC3-208ENST00000548878 ZZEF1O43149 2961 aa0.42□□□□□ -2.34
ARPC3-208ENST00000548878 ATMQ13315 3056 aa0.41□□□□□ -2.34
ARPC3-208ENST00000548878 CFAP54Q96N23 3096 aa0.41□□□□□ -2.34
ARPC3-208ENST00000548878 PRKDCP78527 4128 aaKnown RBP0.41□□□□□ -2.34
ARPC3-208ENST00000548878 TGP01266 2768 aa0.41□□□□□ -2.34
ARPC3-208ENST00000548878 DMXL2Q8TDJ6 3036 aa0.41□□□□□ -2.34
ARPC3-208ENST00000548878 CENPEQ02224 2701 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms