RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 ANKRD29Q8N6D5 301 aa3.45□□□□□ -1.86
SCAF11-211ENST00000547950 SIGMAR1Q99720 223 aa3.45□□□□□ -1.86
SCAF11-211ENST00000547950 TRBV20-1A0A075B6N2 111 aa3.44□□□□□ -1.86
SCAF11-211ENST00000547950 DNAL4O96015 105 aa3.44□□□□□ -1.86
SCAF11-211ENST00000547950 IGKV4-1P06312 121 aa3.44□□□□□ -1.86
SCAF11-211ENST00000547950 DEFB116Q30KQ4 102 aa3.44□□□□□ -1.86
SCAF11-211ENST00000547950 ORMDL1Q9P0S3 153 aa3.44□□□□□ -1.86
SCAF11-211ENST00000547950 K7ERJ3 54 aa3.43□□□□□ -1.86
SCAF11-211ENST00000547950 IGKV2-30P06310 120 aa3.43□□□□□ -1.86
SCAF11-211ENST00000547950 LINC00313P59037 77 aa3.43□□□□□ -1.86
SCAF11-211ENST00000547950 TRBV7-4A0A0J9YYF1 115 aa3.42□□□□□ -1.86
SCAF11-211ENST00000547950 TMEM256-PLSCR3K7ERE1 68 aa3.42□□□□□ -1.86
SCAF11-211ENST00000547950 COX6CP09669 75 aa3.42□□□□□ -1.86
SCAF11-211ENST00000547950 KRTAP16-1A8MUX0 517 aa3.41□□□□□ -1.86
SCAF11-211ENST00000547950 H3BQ85 93 aa3.41□□□□□ -1.86
SCAF11-211ENST00000547950 CCKP06307 115 aa3.41□□□□□ -1.86
SCAF11-211ENST00000547950 HSD52Q0P140 79 aa3.41□□□□□ -1.86
SCAF11-211ENST00000547950 PYY3Q5JQD4 70 aa3.41□□□□□ -1.86
SCAF11-211ENST00000547950 NOTCH2NLQ7Z3S9 236 aa3.41□□□□□ -1.86
SCAF11-211ENST00000547950 IGHV6-1A0A0B4J1U7 121 aa3.4□□□□□ -1.87
SCAF11-211ENST00000547950 TRACP01848 142 aa3.4□□□□□ -1.87
SCAF11-211ENST00000547950 SCGB1C2P0DMR2 95 aa3.4□□□□□ -1.87
SCAF11-211ENST00000547950 VPS25Q9BRG1 176 aa3.4□□□□□ -1.87
SCAF11-211ENST00000547950 FAM236DA0A1B0GTK5 79 aa3.39□□□□□ -1.87
SCAF11-211ENST00000547950 FAM236CP0DP71 79 aa3.39□□□□□ -1.87
SCAF11-211ENST00000547950 UBE2V1Q13404 147 aa3.39□□□□□ -1.87
SCAF11-211ENST00000547950 LINC00472Q9H8W2 130 aa3.39□□□□□ -1.87
SCAF11-211ENST00000547950 FLGP20930 4061 aaPredicted RBP3.38□□□□□ -1.87
SCAF11-211ENST00000547950 UQCR10Q9UDW1 63 aa3.38□□□□□ -1.87
SCAF11-211ENST00000547950 RBM3P98179 157 aaKnown RBP3.37□□□□□ -1.87
SCAF11-211ENST00000547950 DSCR8Q96T75 97 aa3.37□□□□□ -1.87
SCAF11-211ENST00000547950 BAALC-AS2P0C853 105 aa3.36□□□□□ -1.87
SCAF11-211ENST00000547950 RBM12B-AS1Q9P1G2 102 aa3.36□□□□□ -1.87
SCAF11-211ENST00000547950 A0A1B0GVX0 72 aa3.35□□□□□ -1.87
SCAF11-211ENST00000547950 C9JAW5 83 aa3.35□□□□□ -1.87
SCAF11-211ENST00000547950 HRES1P13985 223 aa3.35□□□□□ -1.87
SCAF11-211ENST00000547950 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
SCAF11-211ENST00000547950 C8orf87E5RJ46 101 aa3.34□□□□□ -1.87
SCAF11-211ENST00000547950 J3KT08 172 aa3.33□□□□□ -1.88
SCAF11-211ENST00000547950 MT2AP02795 61 aa3.33□□□□□ -1.88
SCAF11-211ENST00000547950 KRTAP10-7P60409 375 aaPredicted RBP3.33□□□□□ -1.88
SCAF11-211ENST00000547950 MPLKIPQ8TAP9 179 aa3.33□□□□□ -1.88
SCAF11-211ENST00000547950 NDUFB1O75438 58 aa3.32□□□□□ -1.88
SCAF11-211ENST00000547950 SPINK7P58062 85 aa3.32□□□□□ -1.88
SCAF11-211ENST00000547950 KRTAP10-10P60014 251 aa3.32□□□□□ -1.88
SCAF11-211ENST00000547950 Q6ZQT0 140 aa3.32□□□□□ -1.88
SCAF11-211ENST00000547950 ZCCHC13Q8WW36 166 aaKnown RBP3.32□□□□□ -1.88
SCAF11-211ENST00000547950 NAA38Q9BRA0 125 aaKnown RBP3.32□□□□□ -1.88
SCAF11-211ENST00000547950 LYRM7Q5U5X0 104 aa3.31□□□□□ -1.88
SCAF11-211ENST00000547950 MTURNQ8N3F0 131 aa3.31□□□□□ -1.88
SCAF11-211ENST00000547950 MT1FP04733 61 aa3.3□□□□□ -1.88
SCAF11-211ENST00000547950 ATXN8Q156A1 80 aa3.3□□□□□ -1.88
SCAF11-211ENST00000547950 JMJD7-PLA2G4BH0Y9G9 81 aa3.29□□□□□ -1.88
SCAF11-211ENST00000547950 M0R143 59 aa3.29□□□□□ -1.88
SCAF11-211ENST00000547950 C8orf17Q9NRJ1 99 aa3.29□□□□□ -1.88
SCAF11-211ENST00000547950 USH2AO75445 5202 aa3.29□□□□□ -1.88
SCAF11-211ENST00000547950 IGKV3D-7A0A0C4DH55 119 aa3.28□□□□□ -1.88
SCAF11-211ENST00000547950 A8MWP4 228 aa3.28□□□□□ -1.88
SCAF11-211ENST00000547950 KRTAP5-11Q6L8G4 156 aa3.28□□□□□ -1.88
SCAF11-211ENST00000547950 KRTAP2-2Q9BYT5 123 aa3.28□□□□□ -1.88
SCAF11-211ENST00000547950 LOC110117498A0A087WWA1 95 aa3.27□□□□□ -1.89
SCAF11-211ENST00000547950 PDE6GP18545 87 aa3.27□□□□□ -1.89
SCAF11-211ENST00000547950 NREPQ16612 68 aa3.27□□□□□ -1.89
SCAF11-211ENST00000547950 C14orf132Q9NPU4 83 aa3.27□□□□□ -1.89
SCAF11-211ENST00000547950 IGKV2D-30A0A075B6S6 120 aa3.26□□□□□ -1.89
SCAF11-211ENST00000547950 A0A1B0GW54 56 aa3.26□□□□□ -1.89
SCAF11-211ENST00000547950 Q6ZVQ6 151 aa3.26□□□□□ -1.89
SCAF11-211ENST00000547950 WFDC13Q8IUB5 93 aa3.26□□□□□ -1.89
SCAF11-211ENST00000547950 BATFQ16520 125 aa3.25□□□□□ -1.89
SCAF11-211ENST00000547950 PRR15Q8IV56 129 aa3.25□□□□□ -1.89
SCAF11-211ENST00000547950 SSPOA2VEC9 5147 aa3.24□□□□□ -1.89
SCAF11-211ENST00000547950 NDUFS5O43920 106 aa3.23□□□□□ -1.89
SCAF11-211ENST00000547950 MRPL34Q9BQ48 92 aaKnown RBP3.23□□□□□ -1.89
SCAF11-211ENST00000547950 MMP24-AS1A0A0U1RRL7 71 aa3.22□□□□□ -1.89
SCAF11-211ENST00000547950 TMEM254Q8TBM7 123 aa3.22□□□□□ -1.89
SCAF11-211ENST00000547950 hDV103S1A0JD37 113 aa3.21□□□□□ -1.9
SCAF11-211ENST00000547950 TSTD3H0UI37 97 aa3.2□□□□□ -1.9
SCAF11-211ENST00000547950 K7EQZ3 153 aa3.2□□□□□ -1.9
SCAF11-211ENST00000547950 BPY2O14599 106 aa3.2□□□□□ -1.9
SCAF11-211ENST00000547950 SMIM6P0DI80 62 aa3.2□□□□□ -1.9
SCAF11-211ENST00000547950 H1FX-AS1Q4G0G2 97 aa3.2□□□□□ -1.9
SCAF11-211ENST00000547950 FCGBPQ9Y6R7 5405 aaPredicted RBP3.19□□□□□ -1.9
SCAF11-211ENST00000547950 H3BT86 120 aa3.18□□□□□ -1.9
SCAF11-211ENST00000547950 Q5W150 140 aa3.18□□□□□ -1.9
SCAF11-211ENST00000547950 LINC00846Q9NV44 126 aa3.18□□□□□ -1.9
SCAF11-211ENST00000547950 A0A1W2PPM0 123 aa3.17□□□□□ -1.9
SCAF11-211ENST00000547950 TAX1BP3O14907 124 aa3.17□□□□□ -1.9
SCAF11-211ENST00000547950 Q8N9L7 120 aa3.17□□□□□ -1.9
SCAF11-211ENST00000547950 CASC2Q6XLA1 102 aa3.16□□□□□ -1.9
SCAF11-211ENST00000547950 MACF1Q9UPN3 7388 aaKnown RBP3.16□□□□□ -1.9
SCAF11-211ENST00000547950 HCG22E2RYF7 251 aa3.15□□□□□ -1.91
SCAF11-211ENST00000547950 PCP4P48539 62 aa3.15□□□□□ -1.91
SCAF11-211ENST00000547950 KRTAP19-6Q3LI70 58 aa3.15□□□□□ -1.91
SCAF11-211ENST00000547950 C7orf65Q6ZTY9 151 aa3.15□□□□□ -1.91
SCAF11-211ENST00000547950 SYNE2Q8WXH0 6885 aaKnown RBP3.14□□□□□ -1.91
SCAF11-211ENST00000547950 C4orf26Q17RF5 130 aa3.14□□□□□ -1.91
SCAF11-211ENST00000547950 SPCS1Q9Y6A9 102 aa3.14□□□□□ -1.91
SCAF11-211ENST00000547950 LOC105371267A0A1B0GV96 52 aa3.12□□□□□ -1.91
SCAF11-211ENST00000547950 CXCL6P80162 114 aa3.12□□□□□ -1.91
SCAF11-211ENST00000547950 C5orf47Q569G3 176 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms