RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 LINC00643Q86TS7 51 aa6.39□□□□□ -1.39
RAB5C-204ENST00000547517 ANAPC13Q9BS18 74 aa6.39□□□□□ -1.39
RAB5C-204ENST00000547517 RPL37P61927 97 aaKnown RBP6.37□□□□□ -1.39
RAB5C-204ENST00000547517 JMJD7-PLA2G4BH0Y9G9 81 aa6.36□□□□□ -1.39
RAB5C-204ENST00000547517 OBSCN-AS1Q96MR7 158 aa6.36□□□□□ -1.39
RAB5C-204ENST00000547517 TRBV7-4A0A0J9YYF1 115 aa6.34□□□□□ -1.39
RAB5C-204ENST00000547517 CCKP06307 115 aa6.34□□□□□ -1.39
RAB5C-204ENST00000547517 Q96NJ1 140 aa6.34□□□□□ -1.39
RAB5C-204ENST00000547517 LCE2AQ5TA79 106 aaPredicted RBP6.33□□□□□ -1.4
RAB5C-204ENST00000547517 FSIP2Q5CZC0 6907 aa6.32□□□□□ -1.4
RAB5C-204ENST00000547517 RBM3P98179 157 aaKnown RBP6.31□□□□□ -1.4
RAB5C-204ENST00000547517 ATP5EP2Q5VTU8 51 aa6.31□□□□□ -1.4
RAB5C-204ENST00000547517 DSCR8Q96T75 97 aa6.31□□□□□ -1.4
RAB5C-204ENST00000547517 PDE6GP18545 87 aa6.3□□□□□ -1.4
RAB5C-204ENST00000547517 IGKV4-1P06312 121 aa6.29□□□□□ -1.4
RAB5C-204ENST00000547517 LCE2CQ5TA81 110 aa6.29□□□□□ -1.4
RAB5C-204ENST00000547517 DSCR10P59022 87 aa6.28□□□□□ -1.4
RAB5C-204ENST00000547517 Q75L30 129 aa6.28□□□□□ -1.4
RAB5C-204ENST00000547517 DEFB116Q30KQ4 102 aa6.27□□□□□ -1.41
RAB5C-204ENST00000547517 ATOX1O00244 68 aa6.25□□□□□ -1.41
RAB5C-204ENST00000547517 ATP11AUNQ6ZP68 121 aa6.25□□□□□ -1.41
RAB5C-204ENST00000547517 LINC00472Q9H8W2 130 aa6.25□□□□□ -1.41
RAB5C-204ENST00000547517 C20orf166-AS1Q96NR2 134 aa6.24□□□□□ -1.41
RAB5C-204ENST00000547517 FAM236AA0A1B0GUQ0 79 aa6.23□□□□□ -1.41
RAB5C-204ENST00000547517 FAM236BA0A1B0GV22 79 aa6.23□□□□□ -1.41
RAB5C-204ENST00000547517 KRTAP19-2Q3LHN2 52 aa6.23□□□□□ -1.41
RAB5C-204ENST00000547517 C14orf132Q9NPU4 83 aa6.23□□□□□ -1.41
RAB5C-204ENST00000547517 LOC110117498A0A087WWA1 95 aa6.22□□□□□ -1.41
RAB5C-204ENST00000547517 Q6ZQT0 140 aa6.22□□□□□ -1.41
RAB5C-204ENST00000547517 UBL5Q9BZL1 73 aa6.22□□□□□ -1.41
RAB5C-204ENST00000547517 IGHV6-1A0A0B4J1U7 121 aa6.21□□□□□ -1.42
RAB5C-204ENST00000547517 A8MUU9 505 aa6.21□□□□□ -1.42
RAB5C-204ENST00000547517 UQCRQO14949 82 aa6.21□□□□□ -1.42
RAB5C-204ENST00000547517 LINC00313P59037 77 aa6.21□□□□□ -1.42
RAB5C-204ENST00000547517 KRTAP16-1A8MUX0 517 aa6.19□□□□□ -1.42
RAB5C-204ENST00000547517 NOTCH2NLQ7Z3S9 236 aa6.19□□□□□ -1.42
RAB5C-204ENST00000547517 KRTAP9-7A8MTY7 169 aa6.18□□□□□ -1.42
RAB5C-204ENST00000547517 HIST1H4AP62805 103 aaKnown RBP6.18□□□□□ -1.42
RAB5C-204ENST00000547517 A0A1B0GVX0 72 aa6.17□□□□□ -1.42
RAB5C-204ENST00000547517 J3KT08 172 aa6.17□□□□□ -1.42
RAB5C-204ENST00000547517 COX6B2Q6YFQ2 88 aa6.17□□□□□ -1.42
RAB5C-204ENST00000547517 SMIM20Q8N5G0 67 aa6.17□□□□□ -1.42
RAB5C-204ENST00000547517 LINC00846Q9NV44 126 aa6.17□□□□□ -1.42
RAB5C-204ENST00000547517 A0A1B0GW54 56 aa6.16□□□□□ -1.42
RAB5C-204ENST00000547517 COX7CP15954 63 aa6.16□□□□□ -1.42
RAB5C-204ENST00000547517 MT1HP80294 61 aa6.16□□□□□ -1.42
RAB5C-204ENST00000547517 C8orf87E5RJ46 101 aa6.15□□□□□ -1.42
RAB5C-204ENST00000547517 CCDC179H3BU77 68 aa6.14□□□□□ -1.43
RAB5C-204ENST00000547517 CXCL6P80162 114 aa6.13□□□□□ -1.43
RAB5C-204ENST00000547517 SERP2Q8N6R1 65 aa6.13□□□□□ -1.43
RAB5C-204ENST00000547517 NDUFB1O75438 58 aa6.12□□□□□ -1.43
RAB5C-204ENST00000547517 A8MWP4 228 aa6.11□□□□□ -1.43
RAB5C-204ENST00000547517 IGKV3D-7A0A0C4DH55 119 aa6.1□□□□□ -1.43
RAB5C-204ENST00000547517 NREPQ16612 68 aa6.1□□□□□ -1.43
RAB5C-204ENST00000547517 LORP23490 312 aaPredicted RBP6.09□□□□□ -1.43
RAB5C-204ENST00000547517 C8orf17Q9NRJ1 99 aa6.08□□□□□ -1.44
RAB5C-204ENST00000547517 FLGP20930 4061 aaPredicted RBP6.08□□□□□ -1.44
RAB5C-204ENST00000547517 M0R2T5 61 aa6.07□□□□□ -1.44
RAB5C-204ENST00000547517 TMEM258P61165 79 aa6.07□□□□□ -1.44
RAB5C-204ENST00000547517 Q6ZVQ6 151 aa6.05□□□□□ -1.44
RAB5C-204ENST00000547517 TRAV7A0A075B6U4 112 aa6.04□□□□□ -1.44
RAB5C-204ENST00000547517 PRR15Q8IV56 129 aa6.04□□□□□ -1.44
RAB5C-204ENST00000547517 ZCCHC13Q8WW36 166 aaKnown RBP6.04□□□□□ -1.44
RAB5C-204ENST00000547517 RPS28P62857 69 aaKnown RBP6.03□□□□□ -1.44
RAB5C-204ENST00000547517 Q8N9P0 234 aaPredicted RBP6.03□□□□□ -1.44
RAB5C-204ENST00000547517 K7EQZ3 153 aa6.02□□□□□ -1.45
RAB5C-204ENST00000547517 KRTAP10-6P60371 365 aaPredicted RBP6.02□□□□□ -1.45
RAB5C-204ENST00000547517 MMP24-AS1A0A0U1RRL7 71 aa6.01□□□□□ -1.45
RAB5C-204ENST00000547517 BPY2O14599 106 aa6.01□□□□□ -1.45
RAB5C-204ENST00000547517 NDUFC1O43677 76 aa6.01□□□□□ -1.45
RAB5C-204ENST00000547517 A0A087WVE0 104 aa6□□□□□ -1.45
RAB5C-204ENST00000547517 FAM236DA0A1B0GTK5 79 aa6□□□□□ -1.45
RAB5C-204ENST00000547517 FAM236CP0DP71 79 aa6□□□□□ -1.45
RAB5C-204ENST00000547517 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.99□□□□□ -1.45
RAB5C-204ENST00000547517 HRES1P13985 223 aa5.99□□□□□ -1.45
RAB5C-204ENST00000547517 TMEM254Q8TBM7 123 aa5.98□□□□□ -1.45
RAB5C-204ENST00000547517 MRPL34Q9BQ48 92 aaKnown RBP5.98□□□□□ -1.45
RAB5C-204ENST00000547517 hDV103S1A0JD37 113 aa5.97□□□□□ -1.45
RAB5C-204ENST00000547517 ATP5EP56381 51 aaPredicted RBP5.97□□□□□ -1.45
RAB5C-204ENST00000547517 RBM12B-AS1Q9P1G2 102 aa5.97□□□□□ -1.45
RAB5C-204ENST00000547517 SPINK7P58062 85 aa5.96□□□□□ -1.46
RAB5C-204ENST00000547517 Q8N9L7 120 aa5.96□□□□□ -1.46
RAB5C-204ENST00000547517 NDUFS5O43920 106 aa5.95□□□□□ -1.46
RAB5C-204ENST00000547517 KLKP1Q107X0 134 aa5.95□□□□□ -1.46
RAB5C-204ENST00000547517 MPLKIPQ8TAP9 179 aa5.95□□□□□ -1.46
RAB5C-204ENST00000547517 WFDC13Q8IUB5 93 aa5.93□□□□□ -1.46
RAB5C-204ENST00000547517 C20orf197Q8N268 126 aa5.91□□□□□ -1.46
RAB5C-204ENST00000547517 CASC2Q6XLA1 102 aa5.9□□□□□ -1.46
RAB5C-204ENST00000547517 SVIPQ8NHG7 77 aa5.9□□□□□ -1.46
RAB5C-204ENST00000547517 HCG22E2RYF7 251 aa5.87□□□□□ -1.47
RAB5C-204ENST00000547517 SERP1Q9Y6X1 66 aa5.87□□□□□ -1.47
RAB5C-204ENST00000547517 IGKV2D-30A0A075B6S6 120 aa5.84□□□□□ -1.47
RAB5C-204ENST00000547517 H7BZZ5 65 aa5.84□□□□□ -1.47
RAB5C-204ENST00000547517 IGKV2-30P06310 120 aa5.84□□□□□ -1.47
RAB5C-204ENST00000547517 Q5W150 140 aa5.84□□□□□ -1.47
RAB5C-204ENST00000547517 OCR1Q9BZK8 76 aa5.84□□□□□ -1.47
RAB5C-204ENST00000547517 C7orf65Q6ZTY9 151 aa5.82□□□□□ -1.48
RAB5C-204ENST00000547517 KRTAP9-8Q9BYQ0 159 aa5.82□□□□□ -1.48
RAB5C-204ENST00000547517 C5orf47Q569G3 176 aa5.81□□□□□ -1.48
RAB5C-204ENST00000547517 CYSTM1Q9H1C7 97 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 180.7 ms