RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 DNAH8Q96JB1 4490 aa11.37□□□□□ -0.59
MSLN-202ENST00000545450 Q96NJ1 140 aa11.35□□□□□ -0.59
MSLN-202ENST00000545450 PKD1P98161 4303 aa11.35□□□□□ -0.59
MSLN-202ENST00000545450 LOC101927531A0A1B0GV80 90 aa11.34□□□□□ -0.59
MSLN-202ENST00000545450 TP53AIP1Q9HCN2 124 aa11.34□□□□□ -0.59
MSLN-202ENST00000545450 KRTAP10-2P60368 255 aa11.33□□□□□ -0.6
MSLN-202ENST00000545450 Q75L30 129 aa11.33□□□□□ -0.6
MSLN-202ENST00000545450 MOBPQ13875 183 aa11.32□□□□□ -0.6
MSLN-202ENST00000545450 CD164Q04900 197 aa11.3□□□□□ -0.6
MSLN-202ENST00000545450 PCOTHQ58A44 107 aa11.29□□□□□ -0.6
MSLN-202ENST00000545450 C8orf17Q9NRJ1 99 aa11.28□□□□□ -0.6
MSLN-202ENST00000545450 PLAC8Q9NZF1 115 aa11.28□□□□□ -0.6
MSLN-202ENST00000545450 LCA10Q71F78 164 aa11.26□□□□□ -0.61
MSLN-202ENST00000545450 IGLV9-49A0A0B4J1Y8 123 aa11.25□□□□□ -0.61
MSLN-202ENST00000545450 LINC00483Q53H64 154 aa11.24□□□□□ -0.61
MSLN-202ENST00000545450 A6NED7 52 aa11.22□□□□□ -0.61
MSLN-202ENST00000545450 ATP11AUNQ6ZP68 121 aa11.22□□□□□ -0.61
MSLN-202ENST00000545450 A0A1B0GVX0 72 aa11.21□□□□□ -0.61
MSLN-202ENST00000545450 LINC01558Q9Y6Z2 57 aa11.21□□□□□ -0.61
MSLN-202ENST00000545450 PSORS1C2Q9UIG4 136 aa11.2□□□□□ -0.62
MSLN-202ENST00000545450 IGHV6-1A0A0B4J1U7 121 aa11.18□□□□□ -0.62
MSLN-202ENST00000545450 KRTAP10-1P60331 282 aa11.18□□□□□ -0.62
MSLN-202ENST00000545450 SPTSSBQ8NFR3 76 aa11.17□□□□□ -0.62
MSLN-202ENST00000545450 NDUFS5O43920 106 aa11.17□□□□□ -0.62
MSLN-202ENST00000545450 SPAG11AQ6PDA7 123 aa11.17□□□□□ -0.62
MSLN-202ENST00000545450 MRPL34Q9BQ48 92 aaKnown RBP11.17□□□□□ -0.62
MSLN-202ENST00000545450 CDC42SE1Q9NRR8 79 aa11.16□□□□□ -0.62
MSLN-202ENST00000545450 HRES1P13985 223 aa11.16□□□□□ -0.62
MSLN-202ENST00000545450 CIRBP-AS1Q8TBR5 109 aa11.16□□□□□ -0.62
MSLN-202ENST00000545450 PKHD1P08F94 4074 aa11.15□□□□□ -0.62
MSLN-202ENST00000545450 Q6ZSA8 131 aa11.14□□□□□ -0.63
MSLN-202ENST00000545450 KTN1-AS1Q86SY8 53 aa11.14□□□□□ -0.63
MSLN-202ENST00000545450 CDK2AP2O75956 126 aa11.13□□□□□ -0.63
MSLN-202ENST00000545450 ZNF706Q9Y5V0 76 aaPredicted RBP11.13□□□□□ -0.63
MSLN-202ENST00000545450 KMT2CQ8NEZ4 4911 aaKnown RBP11.11□□□□□ -0.63
MSLN-202ENST00000545450 RYR2Q92736 4967 aa11.11□□□□□ -0.63
MSLN-202ENST00000545450 A0A087X002 238 aa11.11□□□□□ -0.63
MSLN-202ENST00000545450 A6NN06 94 aa11.11□□□□□ -0.63
MSLN-202ENST00000545450 NOTCH2NLQ7Z3S9 236 aa11.11□□□□□ -0.63
MSLN-202ENST00000545450 LRP1BQ9NZR2 4599 aa11.08□□□□□ -0.64
MSLN-202ENST00000545450 ZNF861PO60384 105 aa11.06□□□□□ -0.64
MSLN-202ENST00000545450 ANAPC11Q9NYG5 84 aa11.04□□□□□ -0.64
MSLN-202ENST00000545450 IGLV7-43P04211 117 aa11.03□□□□□ -0.64
MSLN-202ENST00000545450 SPINK7P58062 85 aa11.03□□□□□ -0.64
MSLN-202ENST00000545450 KRTAP13-3Q3SY46 172 aa11.03□□□□□ -0.64
MSLN-202ENST00000545450 Q5W150 140 aa11.01□□□□□ -0.65
MSLN-202ENST00000545450 VPS13BQ7Z7G8 4022 aa10.99□□□□□ -0.65
MSLN-202ENST00000545450 DYNC1H1Q14204 4646 aaKnown RBP10.99□□□□□ -0.65
MSLN-202ENST00000545450 A0A1B0GVY2 172 aa10.99□□□□□ -0.65
MSLN-202ENST00000545450 PRR26Q8N8Z3 221 aa10.96□□□□□ -0.66
MSLN-202ENST00000545450 RBM12B-AS1Q9P1G2 102 aa10.96□□□□□ -0.66
MSLN-202ENST00000545450 SPINK6Q6UWN8 80 aa10.93□□□□□ -0.66
MSLN-202ENST00000545450 ACYP2P14621 99 aa10.91□□□□□ -0.66
MSLN-202ENST00000545450 C7orf65Q6ZTY9 151 aa10.91□□□□□ -0.66
MSLN-202ENST00000545450 APOBP04114 4563 aaKnown RBP10.87□□□□□ -0.67
MSLN-202ENST00000545450 C8orf87E5RJ46 101 aa10.87□□□□□ -0.67
MSLN-202ENST00000545450 DMAC1Q96GE9 116 aa10.85□□□□□ -0.67
MSLN-202ENST00000545450 RYR3Q15413 4870 aa10.84□□□□□ -0.67
MSLN-202ENST00000545450 SSBP3-AS1Q7Z2R9 100 aa10.8□□□□□ -0.68
MSLN-202ENST00000545450 FAM229AH3BQW9 127 aa10.77□□□□□ -0.69
MSLN-202ENST00000545450 SMR3BP02814 79 aaPredicted RBP10.77□□□□□ -0.69
MSLN-202ENST00000545450 LINC00313P59037 77 aa10.76□□□□□ -0.69
MSLN-202ENST00000545450 FAT1Q14517 4588 aa10.75□□□□□ -0.69
MSLN-202ENST00000545450 KRTAP1-4P0C5Y4 121 aa10.74□□□□□ -0.69
MSLN-202ENST00000545450 IGKV2-30P06310 120 aa10.73□□□□□ -0.69
MSLN-202ENST00000545450 KRTAP13-2Q52LG2 175 aa10.72□□□□□ -0.69
MSLN-202ENST00000545450 A0A1B0GU69 56 aa10.7□□□□□ -0.7
MSLN-202ENST00000545450 RETNLBQ9BQ08 111 aa10.67□□□□□ -0.7
MSLN-202ENST00000545450 SPATA8Q6RVD6 105 aa10.67□□□□□ -0.7
MSLN-202ENST00000545450 KRTAP10-4P60372 401 aaPredicted RBP10.66□□□□□ -0.7
MSLN-202ENST00000545450 KRTAP16-1A8MUX0 517 aa10.64□□□□□ -0.71
MSLN-202ENST00000545450 PLA2G1BP04054 148 aaKnown RBP10.63□□□□□ -0.71
MSLN-202ENST00000545450 HSPG2P98160 4391 aa10.58□□□□□ -0.72
MSLN-202ENST00000545450 PRAC1Q96KF2 57 aa10.57□□□□□ -0.72
MSLN-202ENST00000545450 UQCR11O14957 56 aa10.56□□□□□ -0.72
MSLN-202ENST00000545450 MIR22HGQ0VDD5 57 aa10.56□□□□□ -0.72
MSLN-202ENST00000545450 TYMSOSQ8TAI1 123 aa10.54□□□□□ -0.72
MSLN-202ENST00000545450 PKHD1L1Q86WI1 4243 aa10.53□□□□□ -0.72
MSLN-202ENST00000545450 ADM2Q7Z4H4 148 aa10.53□□□□□ -0.72
MSLN-202ENST00000545450 IGKV2D-30A0A075B6S6 120 aa10.52□□□□□ -0.73
MSLN-202ENST00000545450 RYR1P21817 5038 aa10.5□□□□□ -0.73
MSLN-202ENST00000545450 EPPK1P58107 5090 aaKnown RBP10.45□□□□□ -0.74
MSLN-202ENST00000545450 C4orf48Q5BLP8 95 aa10.43□□□□□ -0.74
MSLN-202ENST00000545450 Q5VSD8 79 aa10.42□□□□□ -0.74
MSLN-202ENST00000545450 LINC00304Q8N9R0 145 aa10.41□□□□□ -0.74
MSLN-202ENST00000545450 KIAA1109Q2LD37 5005 aa10.41□□□□□ -0.74
MSLN-202ENST00000545450 SPINK1P00995 79 aa10.41□□□□□ -0.74
MSLN-202ENST00000545450 KRTAP17-1Q9BYP8 105 aa10.41□□□□□ -0.74
MSLN-202ENST00000545450 LINC01554Q52M75 96 aa10.36□□□□□ -0.75
MSLN-202ENST00000545450 LRP1Q07954 4544 aaKnown RBP10.36□□□□□ -0.75
MSLN-202ENST00000545450 RPS29P62273 56 aaKnown RBP10.32□□□□□ -0.76
MSLN-202ENST00000545450 TNXBP22105 4242 aa10.31□□□□□ -0.76
MSLN-202ENST00000545450 Q8N1X5 172 aa10.29□□□□□ -0.76
MSLN-202ENST00000545450 FAT3Q8TDW7 4589 aa10.26□□□□□ -0.77
MSLN-202ENST00000545450 CSAG1Q6PB30 78 aa10.24□□□□□ -0.77
MSLN-202ENST00000545450 FLG2Q5D862 2391 aaPredicted RBP10.23□□□□□ -0.77
MSLN-202ENST00000545450 KRTAP10-8P60410 259 aa10.21□□□□□ -0.78
MSLN-202ENST00000545450 MYCBP2O75592 4640 aa10.19□□□□□ -0.78
MSLN-202ENST00000545450 H0YAA0 97 aa10.15□□□□□ -0.78
MSLN-202ENST00000545450 A8MUU9 505 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms