RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 DYNC1H1Q14204 4646 aaKnown RBP-0.79□□□□□ -2.54
LEMD3-206ENST00000545026 ZC3H13Q5T200 1668 aaKnown RBP-0.8□□□□□ -2.54
LEMD3-206ENST00000545026 ITPR1Q14643 2758 aa-0.8□□□□□ -2.54
LEMD3-206ENST00000545026 KANTRA0A1W2PQU2 76 aa-0.8□□□□□ -2.54
LEMD3-206ENST00000545026 UMAD1C9J7I0 102 aa-0.8□□□□□ -2.54
LEMD3-206ENST00000545026 DEFB130BP0DP73 79 aa-0.8□□□□□ -2.54
LEMD3-206ENST00000545026 DEFB130AP0DP74 79 aa-0.8□□□□□ -2.54
LEMD3-206ENST00000545026 IAPPP10997 89 aa-0.8□□□□□ -2.54
LEMD3-206ENST00000545026 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.8□□□□□ -2.54
LEMD3-206ENST00000545026 BPTFQ12830 3046 aa-0.81□□□□□ -2.54
LEMD3-206ENST00000545026 RNF17Q9BXT8 1623 aaKnown RBP-0.81□□□□□ -2.54
LEMD3-206ENST00000545026 SPENQ96T58 3664 aaKnown RBP-0.81□□□□□ -2.54
LEMD3-206ENST00000545026 IFI6P09912 130 aa-0.81□□□□□ -2.54
LEMD3-206ENST00000545026 HMGA1P17096 107 aaKnown RBP-0.81□□□□□ -2.54
LEMD3-206ENST00000545026 IFI27P40305 119 aaPredicted RBP-0.81□□□□□ -2.54
LEMD3-206ENST00000545026 SRCAPQ6ZRS2 3230 aa-0.81□□□□□ -2.54
LEMD3-206ENST00000545026 LRBAP50851 2863 aa-0.81□□□□□ -2.54
LEMD3-206ENST00000545026 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.82□□□□□ -2.54
LEMD3-206ENST00000545026 KDM5DQ9BY66 1539 aa-0.82□□□□□ -2.54
LEMD3-206ENST00000545026 TOGARAM1Q9Y4F4 1720 aa-0.82□□□□□ -2.54
LEMD3-206ENST00000545026 CHD7Q9P2D1 2997 aa-0.82□□□□□ -2.54
LEMD3-206ENST00000545026 SPTBN5Q9NRC6 3674 aaKnown RBP-0.83□□□□□ -2.54
LEMD3-206ENST00000545026 RICTORQ6R327 1708 aa-0.83□□□□□ -2.54
LEMD3-206ENST00000545026 TRRAPQ9Y4A5 3859 aa-0.83□□□□□ -2.54
LEMD3-206ENST00000545026 NDUFA4O00483 81 aa-0.83□□□□□ -2.54
LEMD3-206ENST00000545026 TJP1Q07157 1748 aa-0.84□□□□□ -2.54
LEMD3-206ENST00000545026 DCAF1Q9Y4B6 1507 aa-0.84□□□□□ -2.54
LEMD3-206ENST00000545026 ITSN2Q9NZM3 1697 aa-0.84□□□□□ -2.54
LEMD3-206ENST00000545026 CFAP46Q8IYW2 2715 aa-0.84□□□□□ -2.54
LEMD3-206ENST00000545026 MT1XP80297 61 aa-0.84□□□□□ -2.54
LEMD3-206ENST00000545026 COL6A5A8TX70 2615 aa-0.84□□□□□ -2.54
LEMD3-206ENST00000545026 CFAP74Q9C0B2 1584 aa-0.84□□□□□ -2.54
LEMD3-206ENST00000545026 CDC42BPAQ5VT25 1732 aa-0.84□□□□□ -2.54
LEMD3-206ENST00000545026 KIAA0586Q9BVV6 1533 aa-0.84□□□□□ -2.54
LEMD3-206ENST00000545026 CSMD1Q96PZ7 3565 aa-0.85□□□□□ -2.55
LEMD3-206ENST00000545026 HFM1A2PYH4 1435 aa-0.85□□□□□ -2.55
LEMD3-206ENST00000545026 NREPQ16612 68 aa-0.85□□□□□ -2.55
LEMD3-206ENST00000545026 ABCC1P33527 1531 aa-0.85□□□□□ -2.55
LEMD3-206ENST00000545026 LY75O60449 1722 aa-0.86□□□□□ -2.55
LEMD3-206ENST00000545026 INO80Q9ULG1 1556 aaPredicted RBP-0.86□□□□□ -2.55
LEMD3-206ENST00000545026 DEFB131BA0A096LNP1 70 aa-0.86□□□□□ -2.55
LEMD3-206ENST00000545026 SMR3BP02814 79 aaPredicted RBP-0.86□□□□□ -2.55
LEMD3-206ENST00000545026 CLPSL2Q6UWE3 100 aa-0.86□□□□□ -2.55
LEMD3-206ENST00000545026 KIF1AQ12756 1690 aa-0.86□□□□□ -2.55
LEMD3-206ENST00000545026 NHSQ6T4R5 1651 aa-0.86□□□□□ -2.55
LEMD3-206ENST00000545026 MED14O60244 1454 aa-0.86□□□□□ -2.55
LEMD3-206ENST00000545026 NRAPQ86VF7 1730 aa-0.86□□□□□ -2.55
LEMD3-206ENST00000545026 CELSR3Q9NYQ7 3312 aa-0.87□□□□□ -2.55
LEMD3-206ENST00000545026 MRPL33O75394 65 aaKnown RBP-0.87□□□□□ -2.55
LEMD3-206ENST00000545026 DEFB121Q5J5C9 76 aa-0.87□□□□□ -2.55
LEMD3-206ENST00000545026 TNP1P09430 55 aa-0.88□□□□□ -2.55
LEMD3-206ENST00000545026 TDRG1Q3Y452 100 aa-0.88□□□□□ -2.55
LEMD3-206ENST00000545026 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.88□□□□□ -2.55
LEMD3-206ENST00000545026 RALGAPBQ86X10 1494 aa-0.88□□□□□ -2.55
LEMD3-206ENST00000545026 DNAH17Q9UFH2 4485 aa-0.88□□□□□ -2.55
LEMD3-206ENST00000545026 LRRIQ1Q96JM4 1722 aa-0.89□□□□□ -2.55
LEMD3-206ENST00000545026 MMP24-AS1A0A0U1RRL7 71 aa-0.89□□□□□ -2.55
LEMD3-206ENST00000545026 ST20Q9HBF5 79 aa-0.89□□□□□ -2.55
LEMD3-206ENST00000545026 CD163L1Q9NR16 1453 aa-0.89□□□□□ -2.55
LEMD3-206ENST00000545026 ARHGAP35Q9NRY4 1499 aa-0.89□□□□□ -2.55
LEMD3-206ENST00000545026 ADGRG4Q8IZF6 3080 aa-0.9□□□□□ -2.55
LEMD3-206ENST00000545026 WT1-ASQ06250 92 aa-0.9□□□□□ -2.55
LEMD3-206ENST00000545026 KRTAP8-1Q8IUC2 63 aa-0.9□□□□□ -2.55
LEMD3-206ENST00000545026 DNAH5Q8TE73 4624 aa-0.9□□□□□ -2.55
LEMD3-206ENST00000545026 MGAQ8IWI9 3026 aa-0.9□□□□□ -2.55
LEMD3-206ENST00000545026 ERVK-7P63135 1459 aa-0.91□□□□□ -2.55
LEMD3-206ENST00000545026 IGLV5-48A0A075B6I7 105 aa-0.91□□□□□ -2.56
LEMD3-206ENST00000545026 MT1EP04732 61 aa-0.91□□□□□ -2.56
LEMD3-206ENST00000545026 ADIRFQ15847 76 aa-0.91□□□□□ -2.56
LEMD3-206ENST00000545026 KCNQ1DNQ9H478 68 aa-0.91□□□□□ -2.56
LEMD3-206ENST00000545026 CCDC18Q5T9S5 1454 aa-0.92□□□□□ -2.56
LEMD3-206ENST00000545026 EYSQ5T1H1 3165 aa-0.92□□□□□ -2.56
LEMD3-206ENST00000545026 A0A087WXM4 84 aa-0.92□□□□□ -2.56
LEMD3-206ENST00000545026 MT1HL1P0DM35 61 aa-0.92□□□□□ -2.56
LEMD3-206ENST00000545026 GNG2P59768 71 aa-0.92□□□□□ -2.56
LEMD3-206ENST00000545026 SMG1Q96Q15 3661 aaKnown RBP-0.92□□□□□ -2.56
LEMD3-206ENST00000545026 TLN1Q9Y490 2541 aaKnown RBP-0.92□□□□□ -2.56
LEMD3-206ENST00000545026 SMIM13P0DJ93 91 aa-0.93□□□□□ -2.56
LEMD3-206ENST00000545026 RPS27P42677 84 aaKnown RBP-0.93□□□□□ -2.56
LEMD3-206ENST00000545026 RPS27LQ71UM5 84 aaKnown RBP-0.93□□□□□ -2.56
LEMD3-206ENST00000545026 MT1LQ93083 61 aa-0.93□□□□□ -2.56
LEMD3-206ENST00000545026 UBL5Q9BZL1 73 aa-0.93□□□□□ -2.56
LEMD3-206ENST00000545026 MYO5CQ9NQX4 1742 aa-0.93□□□□□ -2.56
LEMD3-206ENST00000545026 A0A1B0GUL6 1792 aa-0.93□□□□□ -2.56
LEMD3-206ENST00000545026 ABCA13Q86UQ4 5058 aa-0.93□□□□□ -2.56
LEMD3-206ENST00000545026 LMTK2Q8IWU2 1503 aa-0.94□□□□□ -2.56
LEMD3-206ENST00000545026 DNAH10Q8IVF4 4471 aa-0.94□□□□□ -2.56
LEMD3-206ENST00000545026 MINOS1Q5TGZ0 78 aa-0.94□□□□□ -2.56
LEMD3-206ENST00000545026 S100A13Q99584 98 aa-0.94□□□□□ -2.56
LEMD3-206ENST00000545026 MAST1Q9Y2H9 1570 aa-0.95□□□□□ -2.56
LEMD3-206ENST00000545026 ANKARQ7Z5J8 1434 aa-0.95□□□□□ -2.56
LEMD3-206ENST00000545026 CRIP1P50238 77 aa-0.95□□□□□ -2.56
LEMD3-206ENST00000545026 BVES-AS1Q5T3Y7 98 aa-0.95□□□□□ -2.56
LEMD3-206ENST00000545026 ABCA8O94911 1581 aa-0.96□□□□□ -2.56
LEMD3-206ENST00000545026 SMARCA2P51531 1590 aa-0.96□□□□□ -2.56
LEMD3-206ENST00000545026 CDC42BPGQ6DT37 1551 aa-0.96□□□□□ -2.56
LEMD3-206ENST00000545026 ITPR2Q14571 2701 aa-0.96□□□□□ -2.56
LEMD3-206ENST00000545026 H3BUT2 72 aa-0.96□□□□□ -2.56
LEMD3-206ENST00000545026 SFTA3P0C7M3 94 aa-0.96□□□□□ -2.56
LEMD3-206ENST00000545026 MT1GP13640 62 aa-0.96□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms