RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 COX7B2Q8TF08 81 aa0.02□□□□□ -2.41
YBX3-214ENST00000544501 TSC22D3Q99576 134 aa0.02□□□□□ -2.41
YBX3-214ENST00000544501 SMIM3Q9BZL3 60 aa0.02□□□□□ -2.41
YBX3-214ENST00000544501 SNAPC5O75971 98 aa0.01□□□□□ -2.41
YBX3-214ENST00000544501 CFDP00746 253 aaPredicted RBP0.01□□□□□ -2.41
YBX3-214ENST00000544501 NBEAP1P0C6P0 100 aa0.01□□□□□ -2.41
YBX3-214ENST00000544501 GCHFRP30047 84 aa0.01□□□□□ -2.41
YBX3-214ENST00000544501 SNCAP37840 140 aa0.01□□□□□ -2.41
YBX3-214ENST00000544501 RPS28P62857 69 aaKnown RBP0.01□□□□□ -2.41
YBX3-214ENST00000544501 AKAP14Q86UN6 197 aa0.01□□□□□ -2.41
YBX3-214ENST00000544501 CTAGE3PQ8IX95 158 aa0.01□□□□□ -2.41
YBX3-214ENST00000544501 MAGOHBQ96A72 148 aaKnown RBP0.01□□□□□ -2.41
YBX3-214ENST00000544501 S100A13Q99584 98 aa0.01□□□□□ -2.41
YBX3-214ENST00000544501 AGPAT4-IT1Q9H0P7 198 aa0.01□□□□□ -2.41
YBX3-214ENST00000544501 ERG28Q9UKR5 140 aa0.01□□□□□ -2.41
YBX3-214ENST00000544501 V9GYV3 84 aa0.01□□□□□ -2.41
YBX3-214ENST00000544501 TRAV21A0A0B4J279 112 aa0□□□□□ -2.41
YBX3-214ENST00000544501 SNRPGP15A8MWD9 76 aa0□□□□□ -2.41
YBX3-214ENST00000544501 K7EQZ3 153 aa0□□□□□ -2.41
YBX3-214ENST00000544501 M0R3E3 92 aa0□□□□□ -2.41
YBX3-214ENST00000544501 IFNGP01579 166 aa0□□□□□ -2.41
YBX3-214ENST00000544501 SSBP1Q04837 148 aaKnown RBP0□□□□□ -2.41
YBX3-214ENST00000544501 CATR1Q13166 79 aa0□□□□□ -2.41
YBX3-214ENST00000544501 LINC01545Q5VT33 79 aa0□□□□□ -2.41
YBX3-214ENST00000544501 RPL13AP3Q6NVV1 102 aa0□□□□□ -2.41
YBX3-214ENST00000544501 ALKAL2Q6UX46 152 aa0□□□□□ -2.41
YBX3-214ENST00000544501 SPTSSBQ8NFR3 76 aa0□□□□□ -2.41
YBX3-214ENST00000544501 PSMG3Q9BT73 122 aaPredicted RBP0□□□□□ -2.41
YBX3-214ENST00000544501 CMC2Q9NRP2 79 aa0□□□□□ -2.41
YBX3-214ENST00000544501 GSKIPQ9P0R6 139 aa0□□□□□ -2.41
YBX3-214ENST00000544501 S4R3F8 94 aa0□□□□□ -2.41
YBX3-214ENST00000544501 ARL2-SNX15V9GYD0 113 aa0□□□□□ -2.41
YBX3-214ENST00000544501 TRAV1-2A0A0B4J238 106 aa-0.01□□□□□ -2.41
YBX3-214ENST00000544501 F6UZH7 168 aa-0.01□□□□□ -2.41
YBX3-214ENST00000544501 K7ERU9 68 aa-0.01□□□□□ -2.41
YBX3-214ENST00000544501 IGLC2P0DOY2 106 aa-0.01□□□□□ -2.41
YBX3-214ENST00000544501 SPRR1AP35321 89 aa-0.01□□□□□ -2.41
YBX3-214ENST00000544501 ARPC4P59998 168 aa-0.01□□□□□ -2.41
YBX3-214ENST00000544501 CKS1BP61024 79 aa-0.01□□□□□ -2.41
YBX3-214ENST00000544501 NMSQ5H8A3 153 aa-0.01□□□□□ -2.41
YBX3-214ENST00000544501 C5orf38Q86SI9 138 aa-0.01□□□□□ -2.41
YBX3-214ENST00000544501 MAFIPQ8WZ33 124 aa-0.01□□□□□ -2.41
YBX3-214ENST00000544501 TRGV9Q99603 122 aa-0.01□□□□□ -2.41
YBX3-214ENST00000544501 PRO1933Q9H354 126 aa-0.01□□□□□ -2.41
YBX3-214ENST00000544501 LENEPQ9Y5L5 61 aa-0.01□□□□□ -2.41
YBX3-214ENST00000544501 LOC100130705A0A1B0GUX0 176 aa-0.02□□□□□ -2.41
YBX3-214ENST00000544501 ETDCA0A1B0GVM5 59 aa-0.02□□□□□ -2.41
YBX3-214ENST00000544501 LINC01546A6NGU7 62 aa-0.02□□□□□ -2.41
YBX3-214ENST00000544501 ZNF815PA8K554 130 aa-0.02□□□□□ -2.41
YBX3-214ENST00000544501 H3BQ15 152 aa-0.02□□□□□ -2.41
YBX3-214ENST00000544501 CCDC179H3BU77 68 aa-0.02□□□□□ -2.41
YBX3-214ENST00000544501 H3BVH4 76 aa-0.02□□□□□ -2.41
YBX3-214ENST00000544501 J3QR89 54 aa-0.02□□□□□ -2.41
YBX3-214ENST00000544501 M0QZ58 72 aa-0.02□□□□□ -2.41
YBX3-214ENST00000544501 ARPC5O15511 151 aa-0.02□□□□□ -2.41
YBX3-214ENST00000544501 SNCGO76070 127 aa-0.02□□□□□ -2.41
YBX3-214ENST00000544501 IL5P05113 134 aa-0.02□□□□□ -2.41
YBX3-214ENST00000544501 IGLC6P0CF74 106 aa-0.02□□□□□ -2.41
YBX3-214ENST00000544501 FGF7P21781 194 aa-0.02□□□□□ -2.41
YBX3-214ENST00000544501 RRAS2P62070 204 aaPredicted RBP-0.02□□□□□ -2.41
YBX3-214ENST00000544501 UBE2G1P62253 170 aa-0.02□□□□□ -2.41
YBX3-214ENST00000544501 PPP3R1P63098 170 aa-0.02□□□□□ -2.41
YBX3-214ENST00000544501 SPANXN1Q5VSR9 72 aa-0.02□□□□□ -2.41
YBX3-214ENST00000544501 Q6ZRX8 168 aa-0.02□□□□□ -2.41
YBX3-214ENST00000544501 PDCD10Q9BUL8 212 aa-0.02□□□□□ -2.41
YBX3-214ENST00000544501 GNG8Q9UK08 70 aa-0.02□□□□□ -2.41
YBX3-214ENST00000544501 SELENOWP63302 87 aa-0.03□□□□□ -2.41
YBX3-214ENST00000544501 DR1Q01658 176 aa-0.03□□□□□ -2.41
YBX3-214ENST00000544501 ZNF818PQ6ZRF7 136 aa-0.03□□□□□ -2.41
YBX3-214ENST00000544501 Q6ZUT4 128 aa-0.03□□□□□ -2.41
YBX3-214ENST00000544501 PYDC1Q8WXC3 89 aa-0.03□□□□□ -2.41
YBX3-214ENST00000544501 AMELXQ99217 191 aa-0.03□□□□□ -2.41
YBX3-214ENST00000544501 CDC42SE2Q9NRR3 84 aa-0.03□□□□□ -2.41
YBX3-214ENST00000544501 SPANXCQ9NY87 97 aa-0.03□□□□□ -2.41
YBX3-214ENST00000544501 COPZ2Q9P299 210 aa-0.03□□□□□ -2.41
YBX3-214ENST00000544501 TRBV7-7A0A0K0K1E9 115 aa-0.04□□□□□ -2.42
YBX3-214ENST00000544501 CEBPZOSA8MTT3 80 aa-0.04□□□□□ -2.42
YBX3-214ENST00000544501 D6R8Y8 96 aa-0.04□□□□□ -2.42
YBX3-214ENST00000544501 F8VRH5 84 aa-0.04□□□□□ -2.42
YBX3-214ENST00000544501 K7EP34 96 aa-0.04□□□□□ -2.42
YBX3-214ENST00000544501 M0QY20 66 aa-0.04□□□□□ -2.42
YBX3-214ENST00000544501 NCR2O95944 276 aa-0.04□□□□□ -2.42
YBX3-214ENST00000544501 SMIM6P0DI80 62 aa-0.04□□□□□ -2.42
YBX3-214ENST00000544501 SCGB1A1P11684 91 aa-0.04□□□□□ -2.42
YBX3-214ENST00000544501 CRIP1P50238 77 aa-0.04□□□□□ -2.42
YBX3-214ENST00000544501 SMIM11AP58511 58 aa-0.04□□□□□ -2.42
YBX3-214ENST00000544501 Q8IZM0 81 aa-0.04□□□□□ -2.42
YBX3-214ENST00000544501 SEC11CQ9BY50 192 aa-0.04□□□□□ -2.42
YBX3-214ENST00000544501 KCNQ1DNQ9H478 68 aa-0.04□□□□□ -2.42
YBX3-214ENST00000544501 LINC00472Q9H8W2 130 aa-0.04□□□□□ -2.42
YBX3-214ENST00000544501 BATF3Q9NR55 127 aa-0.04□□□□□ -2.42
YBX3-214ENST00000544501 SPANXA1Q9NS26 97 aa-0.04□□□□□ -2.42
YBX3-214ENST00000544501 IGLV5-48A0A075B6I7 105 aa-0.05□□□□□ -2.42
YBX3-214ENST00000544501 A0A087WVE0 104 aa-0.05□□□□□ -2.42
YBX3-214ENST00000544501 C7orf77A4D0Y5 90 aa-0.05□□□□□ -2.42
YBX3-214ENST00000544501 SIX6O95475 246 aa-0.05□□□□□ -2.42
YBX3-214ENST00000544501 HMGN1P05114 100 aa-0.05□□□□□ -2.42
YBX3-214ENST00000544501 MGPP08493 103 aa-0.05□□□□□ -2.42
YBX3-214ENST00000544501 ARMS2P0C7Q2 107 aa-0.05□□□□□ -2.42
YBX3-214ENST00000544501 C3orf79P0CE67 100 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms