RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 Q8N9L7 120 aa5.98□□□□□ -1.45
DDB1-221ENST00000543162 A0A1B0GVX0 72 aa5.97□□□□□ -1.45
DDB1-221ENST00000543162 K7EQZ3 153 aa5.97□□□□□ -1.45
DDB1-221ENST00000543162 MT-ATP8P03928 68 aa5.97□□□□□ -1.45
DDB1-221ENST00000543162 PRR15Q8IV56 129 aa5.97□□□□□ -1.45
DDB1-221ENST00000543162 PCLOQ9Y6V0 5065 aa5.97□□□□□ -1.45
DDB1-221ENST00000543162 IGHV6-1A0A0B4J1U7 121 aa5.96□□□□□ -1.46
DDB1-221ENST00000543162 HIST1H4AP62805 103 aaKnown RBP5.96□□□□□ -1.46
DDB1-221ENST00000543162 PRR4Q16378 134 aa5.96□□□□□ -1.46
DDB1-221ENST00000543162 IGLV7-46A0A075B6I9 117 aa5.95□□□□□ -1.46
DDB1-221ENST00000543162 C8orf87E5RJ46 101 aa5.92□□□□□ -1.46
DDB1-221ENST00000543162 LINC00313P59037 77 aa5.92□□□□□ -1.46
DDB1-221ENST00000543162 IMUPQ9GZP8 106 aa5.92□□□□□ -1.46
DDB1-221ENST00000543162 C8orf17Q9NRJ1 99 aa5.92□□□□□ -1.46
DDB1-221ENST00000543162 NOTCH2NLQ7Z3S9 236 aa5.91□□□□□ -1.46
DDB1-221ENST00000543162 A0A087WVE0 104 aa5.9□□□□□ -1.46
DDB1-221ENST00000543162 C9orf92A6NGG3 77 aa5.9□□□□□ -1.46
DDB1-221ENST00000543162 MMP24-AS1A0A0U1RRL7 71 aa5.89□□□□□ -1.47
DDB1-221ENST00000543162 HCG22E2RYF7 251 aa5.89□□□□□ -1.47
DDB1-221ENST00000543162 KRTAP13-3Q3SY46 172 aa5.88□□□□□ -1.47
DDB1-221ENST00000543162 CASC2Q6XLA1 102 aa5.88□□□□□ -1.47
DDB1-221ENST00000543162 WFDC13Q8IUB5 93 aa5.88□□□□□ -1.47
DDB1-221ENST00000543162 hDV103S1A0JD37 113 aa5.87□□□□□ -1.47
DDB1-221ENST00000543162 TPRXLQ17RH7 258 aa5.86□□□□□ -1.47
DDB1-221ENST00000543162 TMEM254Q8TBM7 123 aa5.85□□□□□ -1.47
DDB1-221ENST00000543162 KRTAP16-1A8MUX0 517 aa5.84□□□□□ -1.47
DDB1-221ENST00000543162 MRPL34Q9BQ48 92 aaKnown RBP5.84□□□□□ -1.47
DDB1-221ENST00000543162 FAM236AA0A1B0GUQ0 79 aa5.82□□□□□ -1.48
DDB1-221ENST00000543162 FAM236BA0A1B0GV22 79 aa5.82□□□□□ -1.48
DDB1-221ENST00000543162 LCE2DQ5TA82 110 aaPredicted RBP5.82□□□□□ -1.48
DDB1-221ENST00000543162 SCGB1A1P11684 91 aa5.81□□□□□ -1.48
DDB1-221ENST00000543162 NDUFS5O43920 106 aa5.8□□□□□ -1.48
DDB1-221ENST00000543162 XP32Q5T750 250 aa5.8□□□□□ -1.48
DDB1-221ENST00000543162 Q8N9P0 234 aaPredicted RBP5.8□□□□□ -1.48
DDB1-221ENST00000543162 C20orf166-AS1Q96NR2 134 aa5.79□□□□□ -1.48
DDB1-221ENST00000543162 A8MUU9 505 aa5.78□□□□□ -1.48
DDB1-221ENST00000543162 Q75L30 129 aa5.77□□□□□ -1.49
DDB1-221ENST00000543162 HERC1Q15751 4861 aa5.76□□□□□ -1.49
DDB1-221ENST00000543162 ATOX1O00244 68 aa5.75□□□□□ -1.49
DDB1-221ENST00000543162 RPL37P61927 97 aaKnown RBP5.75□□□□□ -1.49
DDB1-221ENST00000543162 TP53AIP1Q9HCN2 124 aa5.75□□□□□ -1.49
DDB1-221ENST00000543162 SMIM20Q8N5G0 67 aa5.73□□□□□ -1.49
DDB1-221ENST00000543162 OCR1Q9BZK8 76 aa5.73□□□□□ -1.49
DDB1-221ENST00000543162 UQCRQO14949 82 aa5.72□□□□□ -1.49
DDB1-221ENST00000543162 ATP11AUNQ6ZP68 121 aa5.72□□□□□ -1.49
DDB1-221ENST00000543162 ZCCHC13Q8WW36 166 aaKnown RBP5.71□□□□□ -1.5
DDB1-221ENST00000543162 TRAV7A0A075B6U4 112 aa5.7□□□□□ -1.5
DDB1-221ENST00000543162 Q5W150 140 aa5.69□□□□□ -1.5
DDB1-221ENST00000543162 TRAV22A0A0B4J277 110 aa5.68□□□□□ -1.5
DDB1-221ENST00000543162 SEC61BP60468 96 aaKnown RBP5.68□□□□□ -1.5
DDB1-221ENST00000543162 HMCN2Q8NDA2 5059 aa5.67□□□□□ -1.5
DDB1-221ENST00000543162 LPAP08519 4548 aa5.67□□□□□ -1.5
DDB1-221ENST00000543162 PCOTHQ58A44 107 aa5.67□□□□□ -1.5
DDB1-221ENST00000543162 SERP2Q8N6R1 65 aa5.67□□□□□ -1.5
DDB1-221ENST00000543162 H0Y9P7 68 aa5.66□□□□□ -1.5
DDB1-221ENST00000543162 C5orf47Q569G3 176 aa5.66□□□□□ -1.5
DDB1-221ENST00000543162 ANAPC13Q9BS18 74 aa5.66□□□□□ -1.5
DDB1-221ENST00000543162 MP68P56378 58 aa5.64□□□□□ -1.51
DDB1-221ENST00000543162 LRP2P98164 4655 aa5.63□□□□□ -1.51
DDB1-221ENST00000543162 COX7CP15954 63 aa5.61□□□□□ -1.51
DDB1-221ENST00000543162 LINC00208Q96KT6 92 aa5.61□□□□□ -1.51
DDB1-221ENST00000543162 IGKV2D-30A0A075B6S6 120 aa5.6□□□□□ -1.51
DDB1-221ENST00000543162 LOC101927531A0A1B0GV80 90 aa5.6□□□□□ -1.51
DDB1-221ENST00000543162 H3BPC8 53 aa5.6□□□□□ -1.51
DDB1-221ENST00000543162 IGKV2-30P06310 120 aa5.6□□□□□ -1.51
DDB1-221ENST00000543162 C1orf64Q8NEQ6 169 aa5.6□□□□□ -1.51
DDB1-221ENST00000543162 SPINK7P58062 85 aa5.58□□□□□ -1.52
DDB1-221ENST00000543162 C7orf65Q6ZTY9 151 aa5.58□□□□□ -1.52
DDB1-221ENST00000543162 C20orf197Q8N268 126 aa5.58□□□□□ -1.52
DDB1-221ENST00000543162 A0A0U1RQV1 116 aa5.56□□□□□ -1.52
DDB1-221ENST00000543162 CYP4F30PQ9H0H9 118 aa5.56□□□□□ -1.52
DDB1-221ENST00000543162 SNURFQ9Y675 71 aa5.55□□□□□ -1.52
DDB1-221ENST00000543162 KRTAP4-1Q9BYQ7 146 aa5.53□□□□□ -1.52
DDB1-221ENST00000543162 CCDC179H3BU77 68 aa5.52□□□□□ -1.53
DDB1-221ENST00000543162 KLKP1Q107X0 134 aa5.52□□□□□ -1.53
DDB1-221ENST00000543162 HRES1P13985 223 aa5.48□□□□□ -1.53
DDB1-221ENST00000543162 SEC61GP60059 68 aa5.48□□□□□ -1.53
DDB1-221ENST00000543162 MUC17Q685J3 4493 aa5.48□□□□□ -1.53
DDB1-221ENST00000543162 NDUFC1O43677 76 aa5.47□□□□□ -1.53
DDB1-221ENST00000543162 C4orf26Q17RF5 130 aa5.46□□□□□ -1.54
DDB1-221ENST00000543162 CYSTM1Q9H1C7 97 aa5.45□□□□□ -1.54
DDB1-221ENST00000543162 RBM12B-AS1Q9P1G2 102 aa5.44□□□□□ -1.54
DDB1-221ENST00000543162 UBR4Q5T4S7 5183 aa5.43□□□□□ -1.54
DDB1-221ENST00000543162 MPLKIPQ8TAP9 179 aa5.43□□□□□ -1.54
DDB1-221ENST00000543162 H7BZZ5 65 aa5.42□□□□□ -1.54
DDB1-221ENST00000543162 COX6B2Q6YFQ2 88 aa5.41□□□□□ -1.54
DDB1-221ENST00000543162 FAM236DA0A1B0GTK5 79 aa5.4□□□□□ -1.54
DDB1-221ENST00000543162 FAM236CP0DP71 79 aa5.4□□□□□ -1.54
DDB1-221ENST00000543162 SPANXA2-OT1Q8N9U9 137 aa5.39□□□□□ -1.55
DDB1-221ENST00000543162 KRTAP3-3Q9BYR6 98 aa5.39□□□□□ -1.55
DDB1-221ENST00000543162 KRTAP3-2Q9BYR7 98 aa5.39□□□□□ -1.55
DDB1-221ENST00000543162 KRTAP3-1Q9BYR8 98 aa5.36□□□□□ -1.55
DDB1-221ENST00000543162 RNF213Q63HN8 5207 aa5.35□□□□□ -1.55
DDB1-221ENST00000543162 A8MUN3 132 aa5.35□□□□□ -1.55
DDB1-221ENST00000543162 DMAC1Q96GE9 116 aa5.35□□□□□ -1.55
DDB1-221ENST00000543162 KRTAP19-2Q3LHN2 52 aa5.34□□□□□ -1.55
DDB1-221ENST00000543162 H1FX-AS1Q4G0G2 97 aa5.34□□□□□ -1.55
DDB1-221ENST00000543162 TMEM258P61165 79 aa5.33□□□□□ -1.56
DDB1-221ENST00000543162 MUC2Q02817 5179 aa5.33□□□□□ -1.56
DDB1-221ENST00000543162 ACYP2P14621 99 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms