RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 Q6ZVQ6 151 aa6.18□□□□□ -1.42
NPIPB3-210ENST00000542817 LRP2P98164 4655 aa6.17□□□□□ -1.42
NPIPB3-210ENST00000542817 IGLV8-61A0A075B6I0 122 aa6.17□□□□□ -1.42
NPIPB3-210ENST00000542817 J3QL48 77 aa6.17□□□□□ -1.42
NPIPB3-210ENST00000542817 LCE2DQ5TA82 110 aaPredicted RBP6.17□□□□□ -1.42
NPIPB3-210ENST00000542817 SSBP3-AS1Q7Z2R9 100 aa6.17□□□□□ -1.42
NPIPB3-210ENST00000542817 Q8NBF4 154 aa6.17□□□□□ -1.42
NPIPB3-210ENST00000542817 LAMTOR3Q9UHA4 124 aa6.17□□□□□ -1.42
NPIPB3-210ENST00000542817 TRBV7-4A0A0J9YYF1 115 aa6.16□□□□□ -1.42
NPIPB3-210ENST00000542817 A0A1B0GW54 56 aa6.15□□□□□ -1.43
NPIPB3-210ENST00000542817 LPAP08519 4548 aa6.15□□□□□ -1.43
NPIPB3-210ENST00000542817 LINC00304Q8N9R0 145 aa6.13□□□□□ -1.43
NPIPB3-210ENST00000542817 IGFL1Q6UW32 110 aa6.12□□□□□ -1.43
NPIPB3-210ENST00000542817 FP248Q71RG6 208 aaPredicted RBP6.12□□□□□ -1.43
NPIPB3-210ENST00000542817 F8WEM9 126 aa6.11□□□□□ -1.43
NPIPB3-210ENST00000542817 NREPQ16612 68 aa6.08□□□□□ -1.44
NPIPB3-210ENST00000542817 SPAG11AQ6PDA7 123 aa6.08□□□□□ -1.44
NPIPB3-210ENST00000542817 TMEM254Q8TBM7 123 aa6.08□□□□□ -1.44
NPIPB3-210ENST00000542817 A0A0U1RQV1 116 aa6.07□□□□□ -1.44
NPIPB3-210ENST00000542817 A0A1W2PNM2 257 aa6.07□□□□□ -1.44
NPIPB3-210ENST00000542817 SPINK1P00995 79 aa6.07□□□□□ -1.44
NPIPB3-210ENST00000542817 CD164Q04900 197 aa6.07□□□□□ -1.44
NPIPB3-210ENST00000542817 BPY2O14599 106 aa6.06□□□□□ -1.44
NPIPB3-210ENST00000542817 RPS29P62273 56 aaKnown RBP6.06□□□□□ -1.44
NPIPB3-210ENST00000542817 OCR1Q9BZK8 76 aa6.06□□□□□ -1.44
NPIPB3-210ENST00000542817 SNURFQ9Y675 71 aa6.05□□□□□ -1.44
NPIPB3-210ENST00000542817 SEC61GP60059 68 aa6.04□□□□□ -1.44
NPIPB3-210ENST00000542817 C4orf48Q5BLP8 95 aa6.03□□□□□ -1.44
NPIPB3-210ENST00000542817 UBR4Q5T4S7 5183 aa6.03□□□□□ -1.44
NPIPB3-210ENST00000542817 IGKV4-1P06312 121 aa6.02□□□□□ -1.45
NPIPB3-210ENST00000542817 RETNLBQ9BQ08 111 aa6.02□□□□□ -1.45
NPIPB3-210ENST00000542817 Q1T7F1 81 aa5.99□□□□□ -1.45
NPIPB3-210ENST00000542817 ASB16-AS1Q495Z4 193 aa5.99□□□□□ -1.45
NPIPB3-210ENST00000542817 C1orf195Q5TG92 126 aa5.99□□□□□ -1.45
NPIPB3-210ENST00000542817 V9GYY9 64 aa5.98□□□□□ -1.45
NPIPB3-210ENST00000542817 A0A087WSZ3 146 aa5.97□□□□□ -1.45
NPIPB3-210ENST00000542817 hDV103S1A0JD37 113 aa5.97□□□□□ -1.45
NPIPB3-210ENST00000542817 PRR15Q8IV56 129 aa5.97□□□□□ -1.45
NPIPB3-210ENST00000542817 ZCCHC13Q8WW36 166 aaKnown RBP5.97□□□□□ -1.45
NPIPB3-210ENST00000542817 Q96NJ1 140 aa5.97□□□□□ -1.45
NPIPB3-210ENST00000542817 LIMD2Q9BT23 127 aa5.97□□□□□ -1.45
NPIPB3-210ENST00000542817 CYP4F30PQ9H0H9 118 aa5.97□□□□□ -1.45
NPIPB3-210ENST00000542817 MUC17Q685J3 4493 aa5.95□□□□□ -1.46
NPIPB3-210ENST00000542817 BRK1Q8WUW1 75 aa5.95□□□□□ -1.46
NPIPB3-210ENST00000542817 PRR4Q16378 134 aa5.94□□□□□ -1.46
NPIPB3-210ENST00000542817 LINC00472Q9H8W2 130 aa5.93□□□□□ -1.46
NPIPB3-210ENST00000542817 IGLV7-46A0A075B6I9 117 aa5.92□□□□□ -1.46
NPIPB3-210ENST00000542817 NDUFB1O75438 58 aa5.92□□□□□ -1.46
NPIPB3-210ENST00000542817 RNF213Q63HN8 5207 aa5.91□□□□□ -1.46
NPIPB3-210ENST00000542817 KRTAP13-3Q3SY46 172 aa5.91□□□□□ -1.46
NPIPB3-210ENST00000542817 H3BPC8 53 aa5.89□□□□□ -1.47
NPIPB3-210ENST00000542817 TPRXLQ17RH7 258 aa5.89□□□□□ -1.47
NPIPB3-210ENST00000542817 DEFB116Q30KQ4 102 aa5.87□□□□□ -1.47
NPIPB3-210ENST00000542817 MPLKIPQ8TAP9 179 aa5.87□□□□□ -1.47
NPIPB3-210ENST00000542817 MUC2Q02817 5179 aa5.87□□□□□ -1.47
NPIPB3-210ENST00000542817 PMAIP1Q13794 54 aa5.86□□□□□ -1.47
NPIPB3-210ENST00000542817 Q8N9L7 120 aa5.86□□□□□ -1.47
NPIPB3-210ENST00000542817 SPANXA2-OT1Q8N9U9 137 aa5.86□□□□□ -1.47
NPIPB3-210ENST00000542817 C1orf64Q8NEQ6 169 aa5.86□□□□□ -1.47
NPIPB3-210ENST00000542817 DSCR10P59022 87 aa5.84□□□□□ -1.47
NPIPB3-210ENST00000542817 HCG22E2RYF7 251 aa5.82□□□□□ -1.48
NPIPB3-210ENST00000542817 XP32Q5T750 250 aa5.82□□□□□ -1.48
NPIPB3-210ENST00000542817 NOTCH2NLQ7Z3S9 236 aa5.82□□□□□ -1.48
NPIPB3-210ENST00000542817 TRAV22A0A0B4J277 110 aa5.81□□□□□ -1.48
NPIPB3-210ENST00000542817 C9orf92A6NGG3 77 aa5.81□□□□□ -1.48
NPIPB3-210ENST00000542817 MP68P56378 58 aa5.8□□□□□ -1.48
NPIPB3-210ENST00000542817 KRTAP16-1A8MUX0 517 aa5.77□□□□□ -1.49
NPIPB3-210ENST00000542817 A8MWP4 228 aa5.76□□□□□ -1.49
NPIPB3-210ENST00000542817 K7EQZ3 153 aa5.76□□□□□ -1.49
NPIPB3-210ENST00000542817 A0A1B0GVX0 72 aa5.75□□□□□ -1.49
NPIPB3-210ENST00000542817 IGHV6-1A0A0B4J1U7 121 aa5.74□□□□□ -1.49
NPIPB3-210ENST00000542817 LOC101927531A0A1B0GV80 90 aa5.74□□□□□ -1.49
NPIPB3-210ENST00000542817 Q5VV11 94 aa5.74□□□□□ -1.49
NPIPB3-210ENST00000542817 Q8N9P0 234 aaPredicted RBP5.74□□□□□ -1.49
NPIPB3-210ENST00000542817 ATP11AUNQ6ZP68 121 aa5.73□□□□□ -1.49
NPIPB3-210ENST00000542817 FAT4Q6V0I7 4981 aa5.72□□□□□ -1.49
NPIPB3-210ENST00000542817 LINC00313P59037 77 aa5.72□□□□□ -1.49
NPIPB3-210ENST00000542817 LINC00208Q96KT6 92 aa5.72□□□□□ -1.49
NPIPB3-210ENST00000542817 C20orf166-AS1Q96NR2 134 aa5.72□□□□□ -1.49
NPIPB3-210ENST00000542817 A8MUN3 132 aa5.71□□□□□ -1.5
NPIPB3-210ENST00000542817 A8MUU9 505 aa5.71□□□□□ -1.5
NPIPB3-210ENST00000542817 NDUFS5O43920 106 aa5.71□□□□□ -1.5
NPIPB3-210ENST00000542817 RPL37P61927 97 aaKnown RBP5.71□□□□□ -1.5
NPIPB3-210ENST00000542817 Q75L30 129 aa5.71□□□□□ -1.5
NPIPB3-210ENST00000542817 KRTAP4-1Q9BYQ7 146 aa5.71□□□□□ -1.5
NPIPB3-210ENST00000542817 MMP24-AS1A0A0U1RRL7 71 aa5.7□□□□□ -1.5
NPIPB3-210ENST00000542817 C8orf87E5RJ46 101 aa5.7□□□□□ -1.5
NPIPB3-210ENST00000542817 PSPHP1O15172 72 aa5.7□□□□□ -1.5
NPIPB3-210ENST00000542817 C8orf17Q9NRJ1 99 aa5.7□□□□□ -1.5
NPIPB3-210ENST00000542817 H0Y9P7 68 aa5.68□□□□□ -1.5
NPIPB3-210ENST00000542817 CASC2Q6XLA1 102 aa5.67□□□□□ -1.5
NPIPB3-210ENST00000542817 KTN1-AS1Q86SY8 53 aa5.67□□□□□ -1.5
NPIPB3-210ENST00000542817 TP53AIP1Q9HCN2 124 aa5.67□□□□□ -1.5
NPIPB3-210ENST00000542817 PCOTHQ58A44 107 aa5.66□□□□□ -1.5
NPIPB3-210ENST00000542817 LINC01558Q9Y6Z2 57 aa5.66□□□□□ -1.5
NPIPB3-210ENST00000542817 KRTAP3-3Q9BYR6 98 aa5.65□□□□□ -1.51
NPIPB3-210ENST00000542817 KRTAP3-2Q9BYR7 98 aa5.65□□□□□ -1.51
NPIPB3-210ENST00000542817 CHKB-CPT1BH3BT56 60 aa5.64□□□□□ -1.51
NPIPB3-210ENST00000542817 SEC61BP60468 96 aaKnown RBP5.64□□□□□ -1.51
NPIPB3-210ENST00000542817 CDC42SE1Q9NRR8 79 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms