RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 LRP2P98164 4655 aa3.23□□□□□ -1.89
ABCF1-207ENST00000542772 IGKV4-1P06312 121 aa3.23□□□□□ -1.89
ABCF1-207ENST00000542772 ATP5EP2Q5VTU8 51 aa3.23□□□□□ -1.89
ABCF1-207ENST00000542772 DEFB116Q30KQ4 102 aa3.22□□□□□ -1.89
ABCF1-207ENST00000542772 Q6ZVQ6 151 aa3.22□□□□□ -1.89
ABCF1-207ENST00000542772 DSCR10P59022 87 aa3.21□□□□□ -1.9
ABCF1-207ENST00000542772 UBL5Q9BZL1 73 aa3.21□□□□□ -1.9
ABCF1-207ENST00000542772 FAM236AA0A1B0GUQ0 79 aa3.2□□□□□ -1.9
ABCF1-207ENST00000542772 FAM236BA0A1B0GV22 79 aa3.2□□□□□ -1.9
ABCF1-207ENST00000542772 A8MWP4 228 aa3.2□□□□□ -1.9
ABCF1-207ENST00000542772 XP32Q5T750 250 aa3.2□□□□□ -1.9
ABCF1-207ENST00000542772 IGKV3D-7A0A0C4DH55 119 aa3.19□□□□□ -1.9
ABCF1-207ENST00000542772 A0A1B0GVX0 72 aa3.19□□□□□ -1.9
ABCF1-207ENST00000542772 ATOX1O00244 68 aa3.19□□□□□ -1.9
ABCF1-207ENST00000542772 BPY2O14599 106 aa3.19□□□□□ -1.9
ABCF1-207ENST00000542772 NDUFB1O75438 58 aa3.19□□□□□ -1.9
ABCF1-207ENST00000542772 LINC00313P59037 77 aa3.19□□□□□ -1.9
ABCF1-207ENST00000542772 NOTCH2NLQ7Z3S9 236 aa3.19□□□□□ -1.9
ABCF1-207ENST00000542772 PRR15Q8IV56 129 aa3.19□□□□□ -1.9
ABCF1-207ENST00000542772 C9orf92A6NGG3 77 aa3.18□□□□□ -1.9
ABCF1-207ENST00000542772 KRTAP16-1A8MUX0 517 aa3.18□□□□□ -1.9
ABCF1-207ENST00000542772 C8orf87E5RJ46 101 aa3.18□□□□□ -1.9
ABCF1-207ENST00000542772 CXCL6P80162 114 aa3.18□□□□□ -1.9
ABCF1-207ENST00000542772 A8MUU9 505 aa3.17□□□□□ -1.9
ABCF1-207ENST00000542772 C20orf166-AS1Q96NR2 134 aa3.17□□□□□ -1.9
ABCF1-207ENST00000542772 MUC17Q685J3 4493 aa3.17□□□□□ -1.9
ABCF1-207ENST00000542772 IGHV6-1A0A0B4J1U7 121 aa3.16□□□□□ -1.9
ABCF1-207ENST00000542772 K7EQZ3 153 aa3.16□□□□□ -1.9
ABCF1-207ENST00000542772 UQCRQO14949 82 aa3.16□□□□□ -1.9
ABCF1-207ENST00000542772 HIST1H4AP62805 103 aaKnown RBP3.16□□□□□ -1.9
ABCF1-207ENST00000542772 Q8N9P0 234 aaPredicted RBP3.16□□□□□ -1.9
ABCF1-207ENST00000542772 C8orf17Q9NRJ1 99 aa3.16□□□□□ -1.9
ABCF1-207ENST00000542772 CCDC179H3BU77 68 aa3.15□□□□□ -1.91
ABCF1-207ENST00000542772 RPL37P61927 97 aaKnown RBP3.15□□□□□ -1.91
ABCF1-207ENST00000542772 Q75L30 129 aa3.15□□□□□ -1.91
ABCF1-207ENST00000542772 MMP24-AS1A0A0U1RRL7 71 aa3.14□□□□□ -1.91
ABCF1-207ENST00000542772 COX7CP15954 63 aa3.14□□□□□ -1.91
ABCF1-207ENST00000542772 SEC61BP60468 96 aaKnown RBP3.13□□□□□ -1.91
ABCF1-207ENST00000542772 SMIM20Q8N5G0 67 aa3.13□□□□□ -1.91
ABCF1-207ENST00000542772 SERP2Q8N6R1 65 aa3.13□□□□□ -1.91
ABCF1-207ENST00000542772 Q8N9L7 120 aa3.13□□□□□ -1.91
ABCF1-207ENST00000542772 TMEM254Q8TBM7 123 aa3.13□□□□□ -1.91
ABCF1-207ENST00000542772 MRPL34Q9BQ48 92 aaKnown RBP3.13□□□□□ -1.91
ABCF1-207ENST00000542772 UBR4Q5T4S7 5183 aa3.12□□□□□ -1.91
ABCF1-207ENST00000542772 hDV103S1A0JD37 113 aa3.12□□□□□ -1.91
ABCF1-207ENST00000542772 A0A087WVE0 104 aa3.11□□□□□ -1.91
ABCF1-207ENST00000542772 HCG22E2RYF7 251 aa3.1□□□□□ -1.91
ABCF1-207ENST00000542772 PCOTHQ58A44 107 aa3.1□□□□□ -1.91
ABCF1-207ENST00000542772 CASC2Q6XLA1 102 aa3.1□□□□□ -1.91
ABCF1-207ENST00000542772 ATP11AUNQ6ZP68 121 aa3.1□□□□□ -1.91
ABCF1-207ENST00000542772 TMEM258P61165 79 aa3.09□□□□□ -1.91
ABCF1-207ENST00000542772 KRTAP4-1Q9BYQ7 146 aa3.09□□□□□ -1.91
ABCF1-207ENST00000542772 TRAV7A0A075B6U4 112 aa3.08□□□□□ -1.92
ABCF1-207ENST00000542772 WFDC13Q8IUB5 93 aa3.08□□□□□ -1.92
ABCF1-207ENST00000542772 ZCCHC13Q8WW36 166 aaKnown RBP3.08□□□□□ -1.92
ABCF1-207ENST00000542772 TP53AIP1Q9HCN2 124 aa3.07□□□□□ -1.92
ABCF1-207ENST00000542772 MUC2Q02817 5179 aa3.06□□□□□ -1.92
ABCF1-207ENST00000542772 Q5W150 140 aa3.06□□□□□ -1.92
ABCF1-207ENST00000542772 NDUFC1O43677 76 aa3.05□□□□□ -1.92
ABCF1-207ENST00000542772 NDUFS5O43920 106 aa3.04□□□□□ -1.92
ABCF1-207ENST00000542772 C20orf197Q8N268 126 aa3.04□□□□□ -1.92
ABCF1-207ENST00000542772 ATP5EP56381 51 aaPredicted RBP3.03□□□□□ -1.92
ABCF1-207ENST00000542772 RPS28P62857 69 aaKnown RBP3.03□□□□□ -1.92
ABCF1-207ENST00000542772 KLKP1Q107X0 134 aa3.03□□□□□ -1.92
ABCF1-207ENST00000542772 KRTAP19-2Q3LHN2 52 aa3.03□□□□□ -1.92
ABCF1-207ENST00000542772 RNF213Q63HN8 5207 aa3.03□□□□□ -1.92
ABCF1-207ENST00000542772 FAM236DA0A1B0GTK5 79 aa3.02□□□□□ -1.93
ABCF1-207ENST00000542772 FAM236CP0DP71 79 aa3.02□□□□□ -1.93
ABCF1-207ENST00000542772 SPINK7P58062 85 aa3.02□□□□□ -1.93
ABCF1-207ENST00000542772 MPLKIPQ8TAP9 179 aa3.02□□□□□ -1.93
ABCF1-207ENST00000542772 OCR1Q9BZK8 76 aa3.02□□□□□ -1.93
ABCF1-207ENST00000542772 HRES1P13985 223 aa3.01□□□□□ -1.93
ABCF1-207ENST00000542772 A0A0U1RQV1 116 aa3□□□□□ -1.93
ABCF1-207ENST00000542772 LCE2CQ5TA81 110 aa3□□□□□ -1.93
ABCF1-207ENST00000542772 H7BZZ5 65 aa2.99□□□□□ -1.93
ABCF1-207ENST00000542772 IGKV2-30P06310 120 aa2.99□□□□□ -1.93
ABCF1-207ENST00000542772 C5orf47Q569G3 176 aa2.99□□□□□ -1.93
ABCF1-207ENST00000542772 CYSTM1Q9H1C7 97 aa2.99□□□□□ -1.93
ABCF1-207ENST00000542772 FAT4Q6V0I7 4981 aa2.98□□□□□ -1.93
ABCF1-207ENST00000542772 TRAV22A0A0B4J277 110 aa2.98□□□□□ -1.93
ABCF1-207ENST00000542772 CYP4F30PQ9H0H9 118 aa2.98□□□□□ -1.93
ABCF1-207ENST00000542772 SNURFQ9Y675 71 aa2.98□□□□□ -1.93
ABCF1-207ENST00000542772 SERP1Q9Y6X1 66 aa2.98□□□□□ -1.93
ABCF1-207ENST00000542772 C7orf65Q6ZTY9 151 aa2.97□□□□□ -1.93
ABCF1-207ENST00000542772 IGKV2D-30A0A075B6S6 120 aa2.96□□□□□ -1.94
ABCF1-207ENST00000542772 LOC101927531A0A1B0GV80 90 aa2.96□□□□□ -1.94
ABCF1-207ENST00000542772 H0Y9P7 68 aa2.96□□□□□ -1.94
ABCF1-207ENST00000542772 H3BPC8 53 aa2.96□□□□□ -1.94
ABCF1-207ENST00000542772 MP68P56378 58 aa2.96□□□□□ -1.94
ABCF1-207ENST00000542772 LCE2AQ5TA79 106 aaPredicted RBP2.95□□□□□ -1.94
ABCF1-207ENST00000542772 RBM12B-AS1Q9P1G2 102 aa2.95□□□□□ -1.94
ABCF1-207ENST00000542772 C1orf64Q8NEQ6 169 aa2.94□□□□□ -1.94
ABCF1-207ENST00000542772 LINC00208Q96KT6 92 aa2.94□□□□□ -1.94
ABCF1-207ENST00000542772 COX6B2Q6YFQ2 88 aa2.93□□□□□ -1.94
ABCF1-207ENST00000542772 KRTAP3-1Q9BYR8 98 aa2.93□□□□□ -1.94
ABCF1-207ENST00000542772 SMIM26A0A096LP01 95 aa2.92□□□□□ -1.94
ABCF1-207ENST00000542772 MT1HP80294 61 aa2.92□□□□□ -1.94
ABCF1-207ENST00000542772 SVIPQ8NHG7 77 aa2.92□□□□□ -1.94
ABCF1-207ENST00000542772 FLGP20930 4061 aaPredicted RBP2.92□□□□□ -1.94
ABCF1-207ENST00000542772 C4orf26Q17RF5 130 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms