RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 PLAC8Q9NZF1 115 aa5.66□□□□□ -1.5
CNOT4-212ENST00000541284 PSPHP1O15172 72 aa5.66□□□□□ -1.5
CNOT4-212ENST00000541284 CD164Q04900 197 aa5.66□□□□□ -1.5
CNOT4-212ENST00000541284 IGLV7-46A0A075B6I9 117 aa5.66□□□□□ -1.5
CNOT4-212ENST00000541284 Q5VV11 94 aa5.66□□□□□ -1.5
CNOT4-212ENST00000541284 Q8N9P0 234 aaPredicted RBP5.66□□□□□ -1.5
CNOT4-212ENST00000541284 A8MUN3 132 aa5.65□□□□□ -1.51
CNOT4-212ENST00000541284 RTL8CO15255 209 aa5.65□□□□□ -1.51
CNOT4-212ENST00000541284 A0A1B0GVX0 72 aa5.64□□□□□ -1.51
CNOT4-212ENST00000541284 A8MU10 97 aa5.64□□□□□ -1.51
CNOT4-212ENST00000541284 KRTAP13-3Q3SY46 172 aa5.63□□□□□ -1.51
CNOT4-212ENST00000541284 ZNF861PO60384 105 aa5.62□□□□□ -1.51
CNOT4-212ENST00000541284 TP53AIP1Q9HCN2 124 aa5.62□□□□□ -1.51
CNOT4-212ENST00000541284 COA5Q86WW8 74 aa5.61□□□□□ -1.51
CNOT4-212ENST00000541284 ZNF706Q9Y5V0 76 aaPredicted RBP5.61□□□□□ -1.51
CNOT4-212ENST00000541284 KMT2CQ8NEZ4 4911 aaKnown RBP5.61□□□□□ -1.51
CNOT4-212ENST00000541284 IGHV6-1A0A0B4J1U7 121 aa5.6□□□□□ -1.51
CNOT4-212ENST00000541284 PCOTHQ58A44 107 aa5.59□□□□□ -1.51
CNOT4-212ENST00000541284 MRPL34Q9BQ48 92 aaKnown RBP5.59□□□□□ -1.51
CNOT4-212ENST00000541284 FAT3Q8TDW7 4589 aa5.59□□□□□ -1.51
CNOT4-212ENST00000541284 V9GYY9 64 aa5.59□□□□□ -1.52
CNOT4-212ENST00000541284 C1orf195Q5TG92 126 aa5.58□□□□□ -1.52
CNOT4-212ENST00000541284 TGP01266 2768 aa5.58□□□□□ -1.52
CNOT4-212ENST00000541284 Q5W150 140 aa5.58□□□□□ -1.52
CNOT4-212ENST00000541284 LOC101927531A0A1B0GV80 90 aa5.57□□□□□ -1.52
CNOT4-212ENST00000541284 HSPG2P98160 4391 aa5.57□□□□□ -1.52
CNOT4-212ENST00000541284 Q6ZSA8 131 aa5.57□□□□□ -1.52
CNOT4-212ENST00000541284 TNXBP22105 4242 aa5.56□□□□□ -1.52
CNOT4-212ENST00000541284 IGLV7-43P04211 117 aa5.56□□□□□ -1.52
CNOT4-212ENST00000541284 LIMD2Q9BT23 127 aa5.56□□□□□ -1.52
CNOT4-212ENST00000541284 HRES1P13985 223 aa5.55□□□□□ -1.52
CNOT4-212ENST00000541284 Q75L30 129 aa5.54□□□□□ -1.52
CNOT4-212ENST00000541284 PRR15LQ9BU68 103 aa5.53□□□□□ -1.52
CNOT4-212ENST00000541284 LCA10Q71F78 164 aa5.52□□□□□ -1.53
CNOT4-212ENST00000541284 RYR3Q15413 4870 aa5.52□□□□□ -1.53
CNOT4-212ENST00000541284 NDUFS5O43920 106 aa5.52□□□□□ -1.53
CNOT4-212ENST00000541284 LINC01558Q9Y6Z2 57 aa5.51□□□□□ -1.53
CNOT4-212ENST00000541284 KRTAP10-2P60368 255 aa5.51□□□□□ -1.53
CNOT4-212ENST00000541284 KRTAP13-2Q52LG2 175 aa5.5□□□□□ -1.53
CNOT4-212ENST00000541284 C1orf134Q5TEV5 83 aa5.5□□□□□ -1.53
CNOT4-212ENST00000541284 CIRBP-AS1Q8TBR5 109 aa5.5□□□□□ -1.53
CNOT4-212ENST00000541284 CHKB-CPT1BH3BT56 60 aa5.49□□□□□ -1.53
CNOT4-212ENST00000541284 SPINK6Q6UWN8 80 aa5.49□□□□□ -1.53
CNOT4-212ENST00000541284 CDK2AP2O75956 126 aa5.49□□□□□ -1.53
CNOT4-212ENST00000541284 SSBP3-AS1Q7Z2R9 100 aa5.47□□□□□ -1.53
CNOT4-212ENST00000541284 KRTAP16-1A8MUX0 517 aa5.47□□□□□ -1.53
CNOT4-212ENST00000541284 SPAG11AQ6PDA7 123 aa5.47□□□□□ -1.53
CNOT4-212ENST00000541284 C8orf87E5RJ46 101 aa5.45□□□□□ -1.54
CNOT4-212ENST00000541284 KRTAP1-4P0C5Y4 121 aa5.45□□□□□ -1.54
CNOT4-212ENST00000541284 PMAIP1Q13794 54 aa5.44□□□□□ -1.54
CNOT4-212ENST00000541284 SPINK7P58062 85 aa5.43□□□□□ -1.54
CNOT4-212ENST00000541284 KRTAP10-1P60331 282 aa5.43□□□□□ -1.54
CNOT4-212ENST00000541284 PRR26Q8N8Z3 221 aa5.43□□□□□ -1.54
CNOT4-212ENST00000541284 KRTAP10-4P60372 401 aaPredicted RBP5.43□□□□□ -1.54
CNOT4-212ENST00000541284 FAT1Q14517 4588 aa5.43□□□□□ -1.54
CNOT4-212ENST00000541284 A0A1B0GVY2 172 aa5.42□□□□□ -1.54
CNOT4-212ENST00000541284 DMAC1Q96GE9 116 aa5.42□□□□□ -1.54
CNOT4-212ENST00000541284 CDC42SE1Q9NRR8 79 aa5.42□□□□□ -1.54
CNOT4-212ENST00000541284 A6NN06 94 aa5.41□□□□□ -1.54
CNOT4-212ENST00000541284 A6NED7 52 aa5.41□□□□□ -1.54
CNOT4-212ENST00000541284 LY6G6CO95867 125 aa5.41□□□□□ -1.54
CNOT4-212ENST00000541284 IGKV2-30P06310 120 aa5.4□□□□□ -1.55
CNOT4-212ENST00000541284 LINC00313P59037 77 aa5.4□□□□□ -1.55
CNOT4-212ENST00000541284 ATP11AUNQ6ZP68 121 aa5.4□□□□□ -1.55
CNOT4-212ENST00000541284 FAM229AH3BQW9 127 aa5.37□□□□□ -1.55
CNOT4-212ENST00000541284 RETNLBQ9BQ08 111 aa5.36□□□□□ -1.55
CNOT4-212ENST00000541284 ACYP2P14621 99 aa5.36□□□□□ -1.55
CNOT4-212ENST00000541284 SPTSSBQ8NFR3 76 aa5.34□□□□□ -1.55
CNOT4-212ENST00000541284 KTN1-AS1Q86SY8 53 aa5.33□□□□□ -1.56
CNOT4-212ENST00000541284 RYR1P21817 5038 aa5.33□□□□□ -1.56
CNOT4-212ENST00000541284 SEC61GP60059 68 aa5.32□□□□□ -1.56
CNOT4-212ENST00000541284 IGKV2D-30A0A075B6S6 120 aa5.26□□□□□ -1.57
CNOT4-212ENST00000541284 PLA2G1BP04054 148 aaKnown RBP5.25□□□□□ -1.57
CNOT4-212ENST00000541284 SPINK1P00995 79 aa5.25□□□□□ -1.57
CNOT4-212ENST00000541284 TYMSOSQ8TAI1 123 aa5.24□□□□□ -1.57
CNOT4-212ENST00000541284 SPATA8Q6RVD6 105 aa5.24□□□□□ -1.57
CNOT4-212ENST00000541284 EPPK1P58107 5090 aaKnown RBP5.24□□□□□ -1.57
CNOT4-212ENST00000541284 KRTAP17-1Q9BYP8 105 aa5.23□□□□□ -1.57
CNOT4-212ENST00000541284 LRP1Q07954 4544 aaKnown RBP5.23□□□□□ -1.57
CNOT4-212ENST00000541284 C7orf65Q6ZTY9 151 aa5.23□□□□□ -1.57
CNOT4-212ENST00000541284 RBM12B-AS1Q9P1G2 102 aa5.22□□□□□ -1.57
CNOT4-212ENST00000541284 A0A1B0GU69 56 aa5.22□□□□□ -1.57
CNOT4-212ENST00000541284 RPS29P62273 56 aaKnown RBP5.21□□□□□ -1.57
CNOT4-212ENST00000541284 LINC00304Q8N9R0 145 aa5.18□□□□□ -1.58
CNOT4-212ENST00000541284 C4orf48Q5BLP8 95 aa5.17□□□□□ -1.58
CNOT4-212ENST00000541284 KRTAP3-1Q9BYR8 98 aa5.17□□□□□ -1.58
CNOT4-212ENST00000541284 Q8N1X5 172 aa5.17□□□□□ -1.58
CNOT4-212ENST00000541284 A8MUU9 505 aa5.16□□□□□ -1.58
CNOT4-212ENST00000541284 C20orf166-AS1Q96NR2 134 aa5.16□□□□□ -1.58
CNOT4-212ENST00000541284 ADM2Q7Z4H4 148 aa5.15□□□□□ -1.58
CNOT4-212ENST00000541284 MIR22HGQ0VDD5 57 aa5.14□□□□□ -1.59
CNOT4-212ENST00000541284 UQCR11O14957 56 aa5.14□□□□□ -1.59
CNOT4-212ENST00000541284 PRAC1Q96KF2 57 aa5.12□□□□□ -1.59
CNOT4-212ENST00000541284 SMR3BP02814 79 aaPredicted RBP5.12□□□□□ -1.59
CNOT4-212ENST00000541284 C9orf92A6NGG3 77 aa5.1□□□□□ -1.59
CNOT4-212ENST00000541284 MYCBP2O75592 4640 aa5.1□□□□□ -1.59
CNOT4-212ENST00000541284 H0YAA0 97 aa5.07□□□□□ -1.6
CNOT4-212ENST00000541284 KIAA1109Q2LD37 5005 aa5.06□□□□□ -1.6
CNOT4-212ENST00000541284 FLG2Q5D862 2391 aaPredicted RBP5.04□□□□□ -1.6
CNOT4-212ENST00000541284 ABCA13Q86UQ4 5058 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms