RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 HRCT1Q6UXD1 115 aa6.02□□□□□ -1.45
SPARC-209ENST00000539687 LIMD2Q9BT23 127 aa6.02□□□□□ -1.45
SPARC-209ENST00000539687 MP68P56378 58 aa6.01□□□□□ -1.45
SPARC-209ENST00000539687 WFDC13Q8IUB5 93 aa6.01□□□□□ -1.45
SPARC-209ENST00000539687 Q96NJ1 140 aa6.01□□□□□ -1.45
SPARC-209ENST00000539687 ANAPC11Q9NYG5 84 aa6.01□□□□□ -1.45
SPARC-209ENST00000539687 A0A0U1RQV1 116 aa6□□□□□ -1.45
SPARC-209ENST00000539687 A0A1B0GVX0 72 aa6□□□□□ -1.45
SPARC-209ENST00000539687 A0A1B0GVY2 172 aa6□□□□□ -1.45
SPARC-209ENST00000539687 TP53AIP1Q9HCN2 124 aa6□□□□□ -1.45
SPARC-209ENST00000539687 DNAH11Q96DT5 4516 aa6□□□□□ -1.45
SPARC-209ENST00000539687 DNAH5Q8TE73 4624 aa6□□□□□ -1.45
SPARC-209ENST00000539687 FAM236DA0A1B0GTK5 79 aa5.99□□□□□ -1.45
SPARC-209ENST00000539687 hDV103S1A0JD37 113 aa5.99□□□□□ -1.45
SPARC-209ENST00000539687 FAM236CP0DP71 79 aa5.99□□□□□ -1.45
SPARC-209ENST00000539687 RPS28P62857 69 aaKnown RBP5.99□□□□□ -1.45
SPARC-209ENST00000539687 MMP24-AS1A0A0U1RRL7 71 aa5.98□□□□□ -1.45
SPARC-209ENST00000539687 C8orf87E5RJ46 101 aa5.98□□□□□ -1.45
SPARC-209ENST00000539687 H7BZZ5 65 aa5.98□□□□□ -1.45
SPARC-209ENST00000539687 LCE3BQ5TA77 95 aa5.98□□□□□ -1.45
SPARC-209ENST00000539687 C8orf17Q9NRJ1 99 aa5.98□□□□□ -1.45
SPARC-209ENST00000539687 SNURFQ9Y675 71 aa5.97□□□□□ -1.45
SPARC-209ENST00000539687 KRTAP1-4P0C5Y4 121 aa5.96□□□□□ -1.46
SPARC-209ENST00000539687 SPAG11AQ6PDA7 123 aa5.96□□□□□ -1.46
SPARC-209ENST00000539687 CYSTM1Q9H1C7 97 aa5.96□□□□□ -1.46
SPARC-209ENST00000539687 ABCA13Q86UQ4 5058 aa5.95□□□□□ -1.46
SPARC-209ENST00000539687 SPINK1P00995 79 aa5.95□□□□□ -1.46
SPARC-209ENST00000539687 PLA2G1BP04054 148 aaKnown RBP5.95□□□□□ -1.46
SPARC-209ENST00000539687 RPS29P62273 56 aaKnown RBP5.95□□□□□ -1.46
SPARC-209ENST00000539687 FAT2Q9NYQ8 4349 aa5.95□□□□□ -1.46
SPARC-209ENST00000539687 A0A087X002 238 aa5.94□□□□□ -1.46
SPARC-209ENST00000539687 IGHV6-1A0A0B4J1U7 121 aa5.94□□□□□ -1.46
SPARC-209ENST00000539687 KRTAP13-2Q52LG2 175 aa5.94□□□□□ -1.46
SPARC-209ENST00000539687 TYMSOSQ8TAI1 123 aa5.94□□□□□ -1.46
SPARC-209ENST00000539687 MRPL34Q9BQ48 92 aaKnown RBP5.93□□□□□ -1.46
SPARC-209ENST00000539687 TRAV22A0A0B4J277 110 aa5.92□□□□□ -1.46
SPARC-209ENST00000539687 H0Y9P7 68 aa5.92□□□□□ -1.46
SPARC-209ENST00000539687 ZCCHC13Q8WW36 166 aaKnown RBP5.92□□□□□ -1.46
SPARC-209ENST00000539687 PKD1P98161 4303 aa5.91□□□□□ -1.46
SPARC-209ENST00000539687 SERP1Q9Y6X1 66 aa5.91□□□□□ -1.46
SPARC-209ENST00000539687 KRTAP9-9Q9BYP9 154 aa5.9□□□□□ -1.46
SPARC-209ENST00000539687 KRTAP9-4Q9BYQ2 154 aa5.9□□□□□ -1.46
SPARC-209ENST00000539687 KRTAP4-5Q9BYR2 181 aa5.9□□□□□ -1.46
SPARC-209ENST00000539687 LINC00304Q8N9R0 145 aa5.88□□□□□ -1.47
SPARC-209ENST00000539687 LINC00208Q96KT6 92 aa5.88□□□□□ -1.47
SPARC-209ENST00000539687 NDUFS5O43920 106 aa5.87□□□□□ -1.47
SPARC-209ENST00000539687 C1orf195Q5TG92 126 aa5.87□□□□□ -1.47
SPARC-209ENST00000539687 H3BS24 57 aa5.86□□□□□ -1.47
SPARC-209ENST00000539687 LINC00313P59037 77 aa5.86□□□□□ -1.47
SPARC-209ENST00000539687 SPANXA2-OT1Q8N9U9 137 aa5.86□□□□□ -1.47
SPARC-209ENST00000539687 C1orf64Q8NEQ6 169 aa5.86□□□□□ -1.47
SPARC-209ENST00000539687 LRP1BQ9NZR2 4599 aa5.84□□□□□ -1.47
SPARC-209ENST00000539687 SMR3BP02814 79 aaPredicted RBP5.84□□□□□ -1.47
SPARC-209ENST00000539687 PKHD1P08F94 4074 aa5.84□□□□□ -1.47
SPARC-209ENST00000539687 DYNC1H1Q14204 4646 aaKnown RBP5.83□□□□□ -1.48
SPARC-209ENST00000539687 CYP4F30PQ9H0H9 118 aa5.83□□□□□ -1.48
SPARC-209ENST00000539687 LOC101927531A0A1B0GV80 90 aa5.82□□□□□ -1.48
SPARC-209ENST00000539687 KRTAP10-4P60372 401 aaPredicted RBP5.82□□□□□ -1.48
SPARC-209ENST00000539687 PRR26Q8N8Z3 221 aa5.82□□□□□ -1.48
SPARC-209ENST00000539687 SRRM2Q9UQ35 2752 aaKnown RBP5.82□□□□□ -1.48
SPARC-209ENST00000539687 Q8N9P0 234 aaPredicted RBP5.81□□□□□ -1.48
SPARC-209ENST00000539687 SMIM26A0A096LP01 95 aa5.79□□□□□ -1.48
SPARC-209ENST00000539687 NOTCH2NLQ7Z3S9 236 aa5.79□□□□□ -1.48
SPARC-209ENST00000539687 HERC1Q15751 4861 aa5.79□□□□□ -1.48
SPARC-209ENST00000539687 HSPG2P98160 4391 aa5.76□□□□□ -1.49
SPARC-209ENST00000539687 KRTAP4-8A0A0G2JLE6 195 aa5.76□□□□□ -1.49
SPARC-209ENST00000539687 IGLV7-46A0A075B6I9 117 aa5.75□□□□□ -1.49
SPARC-209ENST00000539687 KRTAP16-1A8MUX0 517 aa5.74□□□□□ -1.49
SPARC-209ENST00000539687 VPS13BQ7Z7G8 4022 aa5.73□□□□□ -1.49
SPARC-209ENST00000539687 Q5VSD8 79 aa5.73□□□□□ -1.49
SPARC-209ENST00000539687 APOBP04114 4563 aaKnown RBP5.73□□□□□ -1.49
SPARC-209ENST00000539687 OXTP01178 125 aa5.72□□□□□ -1.49
SPARC-209ENST00000539687 KRTAP13-3Q3SY46 172 aa5.72□□□□□ -1.49
SPARC-209ENST00000539687 Q8N1X5 172 aa5.7□□□□□ -1.5
SPARC-209ENST00000539687 PCOTHQ58A44 107 aa5.69□□□□□ -1.5
SPARC-209ENST00000539687 Q5W150 140 aa5.69□□□□□ -1.5
SPARC-209ENST00000539687 IGKV2-30P06310 120 aa5.68□□□□□ -1.5
SPARC-209ENST00000539687 V9GYY9 64 aa5.68□□□□□ -1.5
SPARC-209ENST00000539687 PRR4Q16378 134 aa5.67□□□□□ -1.5
SPARC-209ENST00000539687 FP248Q71RG6 208 aaPredicted RBP5.67□□□□□ -1.5
SPARC-209ENST00000539687 LCE4AQ5TA78 99 aa5.66□□□□□ -1.5
SPARC-209ENST00000539687 KRTAP10-8P60410 259 aa5.65□□□□□ -1.5
SPARC-209ENST00000539687 C20orf166-AS1Q96NR2 134 aa5.64□□□□□ -1.51
SPARC-209ENST00000539687 A8MUU9 505 aa5.62□□□□□ -1.51
SPARC-209ENST00000539687 ACYP2P14621 99 aa5.62□□□□□ -1.51
SPARC-209ENST00000539687 Q1T7F1 81 aa5.62□□□□□ -1.51
SPARC-209ENST00000539687 C7orf65Q6ZTY9 151 aa5.62□□□□□ -1.51
SPARC-209ENST00000539687 COA5Q86WW8 74 aa5.62□□□□□ -1.51
SPARC-209ENST00000539687 UBR4Q5T4S7 5183 aa5.61□□□□□ -1.51
SPARC-209ENST00000539687 PKHD1L1Q86WI1 4243 aa5.61□□□□□ -1.51
SPARC-209ENST00000539687 LCE1DQ5T752 114 aa5.61□□□□□ -1.51
SPARC-209ENST00000539687 HRES1P13985 223 aa5.6□□□□□ -1.51
SPARC-209ENST00000539687 DMBT1Q9UGM3 2413 aaPredicted RBP5.59□□□□□ -1.51
SPARC-209ENST00000539687 FAT1Q14517 4588 aa5.59□□□□□ -1.51
SPARC-209ENST00000539687 Q75L30 129 aa5.59□□□□□ -1.51
SPARC-209ENST00000539687 DMAC1Q96GE9 116 aa5.59□□□□□ -1.51
SPARC-209ENST00000539687 IGKV2D-30A0A075B6S6 120 aa5.58□□□□□ -1.52
SPARC-209ENST00000539687 RETNLBQ9BQ08 111 aa5.58□□□□□ -1.52
SPARC-209ENST00000539687 MPLKIPQ8TAP9 179 aa5.57□□□□□ -1.52
SPARC-209ENST00000539687 C9orf92A6NGG3 77 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms