RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 H1FX-AS1Q4G0G2 97 aa3.83□□□□□ -1.8
LSAMP-207ENST00000539563 MGAM2Q2M2H8 2515 aa3.83□□□□□ -1.8
LSAMP-207ENST00000539563 DNHD1Q96M86 4753 aa3.83□□□□□ -1.8
LSAMP-207ENST00000539563 ROMO1P60602 79 aa3.83□□□□□ -1.8
LSAMP-207ENST00000539563 CMYA5Q8N3K9 4069 aa3.82□□□□□ -1.8
LSAMP-207ENST00000539563 TRRAPQ9Y4A5 3859 aa3.82□□□□□ -1.8
LSAMP-207ENST00000539563 ASB16-AS1Q495Z4 193 aa3.82□□□□□ -1.8
LSAMP-207ENST00000539563 HECTD1Q9ULT8 2610 aa3.81□□□□□ -1.8
LSAMP-207ENST00000539563 RPS29P62273 56 aaKnown RBP3.8□□□□□ -1.8
LSAMP-207ENST00000539563 PDZD2O15018 2839 aa3.79□□□□□ -1.8
LSAMP-207ENST00000539563 KRTAP29-1A8MX34 341 aaPredicted RBP3.79□□□□□ -1.8
LSAMP-207ENST00000539563 CHD6Q8TD26 2715 aa3.78□□□□□ -1.8
LSAMP-207ENST00000539563 M0QZ58 72 aa3.78□□□□□ -1.8
LSAMP-207ENST00000539563 CSMD3Q7Z407 3707 aa3.78□□□□□ -1.8
LSAMP-207ENST00000539563 A0A0A0MQY5 61 aa3.77□□□□□ -1.81
LSAMP-207ENST00000539563 ADM2Q7Z4H4 148 aa3.77□□□□□ -1.81
LSAMP-207ENST00000539563 FLNCQ14315 2725 aa3.77□□□□□ -1.81
LSAMP-207ENST00000539563 PLAC4Q8WY50 150 aa3.77□□□□□ -1.81
LSAMP-207ENST00000539563 A0A087X002 238 aa3.77□□□□□ -1.81
LSAMP-207ENST00000539563 PRAC1Q96KF2 57 aa3.76□□□□□ -1.81
LSAMP-207ENST00000539563 PANO1I0J062 215 aa3.76□□□□□ -1.81
LSAMP-207ENST00000539563 NIPBLQ6KC79 2804 aaeCLIP3.76□□□□□ -1.81
LSAMP-207ENST00000539563 MAST4O15021 2626 aa3.75□□□□□ -1.81
LSAMP-207ENST00000539563 TEX15Q9BXT5 2789 aa3.75□□□□□ -1.81
LSAMP-207ENST00000539563 FLNBO75369 2602 aaKnown RBP3.74□□□□□ -1.81
LSAMP-207ENST00000539563 OTOGQ6ZRI0 2925 aa3.74□□□□□ -1.81
LSAMP-207ENST00000539563 CENPEQ02224 2701 aa3.73□□□□□ -1.81
LSAMP-207ENST00000539563 Q6ZRN7 208 aaPredicted RBP3.71□□□□□ -1.82
LSAMP-207ENST00000539563 SPATA8Q6RVD6 105 aa3.71□□□□□ -1.82
LSAMP-207ENST00000539563 MXRA5Q9NR99 2828 aa3.71□□□□□ -1.82
LSAMP-207ENST00000539563 ITPR2Q14571 2701 aa3.7□□□□□ -1.82
LSAMP-207ENST00000539563 NBEAL1Q6ZS30 2694 aa3.7□□□□□ -1.82
LSAMP-207ENST00000539563 IGSF10Q6WRI0 2623 aa3.7□□□□□ -1.82
LSAMP-207ENST00000539563 H3BS24 57 aa3.7□□□□□ -1.82
LSAMP-207ENST00000539563 LYSTQ99698 3801 aa3.69□□□□□ -1.82
LSAMP-207ENST00000539563 NOTCH2NLQ7Z3S9 236 aa3.69□□□□□ -1.82
LSAMP-207ENST00000539563 KRTAP11-1Q8IUC1 163 aa3.69□□□□□ -1.82
LSAMP-207ENST00000539563 TEP1Q99973 2627 aaKnown RBP3.68□□□□□ -1.82
LSAMP-207ENST00000539563 KRTAP13-1Q8IUC0 172 aa3.67□□□□□ -1.82
LSAMP-207ENST00000539563 A8MUU9 505 aa3.67□□□□□ -1.82
LSAMP-207ENST00000539563 DMBT1Q9UGM3 2413 aaPredicted RBP3.67□□□□□ -1.82
LSAMP-207ENST00000539563 UNC79Q9P2D8 2635 aa3.66□□□□□ -1.82
LSAMP-207ENST00000539563 KRTAP21-3Q3LHN1 58 aa3.66□□□□□ -1.82
LSAMP-207ENST00000539563 KRTAP7-1Q8IUC3 87 aa3.66□□□□□ -1.82
LSAMP-207ENST00000539563 GCN1Q92616 2671 aaKnown RBP3.65□□□□□ -1.82
LSAMP-207ENST00000539563 NF1P21359 2839 aa3.65□□□□□ -1.83
LSAMP-207ENST00000539563 STAB1Q9NY15 2570 aa3.64□□□□□ -1.83
LSAMP-207ENST00000539563 KRTAP13-2Q52LG2 175 aa3.63□□□□□ -1.83
LSAMP-207ENST00000539563 DNAH1Q9P2D7 4330 aa3.62□□□□□ -1.83
LSAMP-207ENST00000539563 KRTAP25-1Q3LHN0 102 aa3.62□□□□□ -1.83
LSAMP-207ENST00000539563 ZANQ9Y493 2812 aa3.62□□□□□ -1.83
LSAMP-207ENST00000539563 SETXQ7Z333 2677 aaKnown RBP3.61□□□□□ -1.83
LSAMP-207ENST00000539563 APCP25054 2843 aa3.6□□□□□ -1.83
LSAMP-207ENST00000539563 COL6A5A8TX70 2615 aa3.6□□□□□ -1.83
LSAMP-207ENST00000539563 A6NN06 94 aa3.59□□□□□ -1.83
LSAMP-207ENST00000539563 NBEAL2Q6ZNJ1 2754 aa3.59□□□□□ -1.83
LSAMP-207ENST00000539563 C20orf166-AS1Q96NR2 134 aa3.59□□□□□ -1.84
LSAMP-207ENST00000539563 A8MU10 97 aa3.58□□□□□ -1.84
LSAMP-207ENST00000539563 DYNC2H1Q8NCM8 4307 aaKnown RBP3.57□□□□□ -1.84
LSAMP-207ENST00000539563 BAHCC1Q9P281 2608 aa3.57□□□□□ -1.84
LSAMP-207ENST00000539563 FBN3Q75N90 2809 aa3.57□□□□□ -1.84
LSAMP-207ENST00000539563 COL7A1Q02388 2944 aa3.57□□□□□ -1.84
LSAMP-207ENST00000539563 TNP1P09430 55 aa3.56□□□□□ -1.84
LSAMP-207ENST00000539563 VWFP04275 2813 aa3.55□□□□□ -1.84
LSAMP-207ENST00000539563 MAP1AP78559 2803 aaPredicted RBP3.55□□□□□ -1.84
LSAMP-207ENST00000539563 PRKDCP78527 4128 aaKnown RBP3.55□□□□□ -1.84
LSAMP-207ENST00000539563 DNAH7Q8WXX0 4024 aa3.54□□□□□ -1.84
LSAMP-207ENST00000539563 KRTAP16-1A8MUX0 517 aa3.54□□□□□ -1.84
LSAMP-207ENST00000539563 NSD1Q96L73 2696 aaPredicted RBP3.54□□□□□ -1.84
LSAMP-207ENST00000539563 PKD1L1Q8TDX9 2849 aa3.52□□□□□ -1.85
LSAMP-207ENST00000539563 STAB2Q8WWQ8 2551 aa3.51□□□□□ -1.85
LSAMP-207ENST00000539563 RYR3Q15413 4870 aa3.51□□□□□ -1.85
LSAMP-207ENST00000539563 TENM1Q9UKZ4 2725 aa3.5□□□□□ -1.85
LSAMP-207ENST00000539563 NOTCH1P46531 2555 aa3.5□□□□□ -1.85
LSAMP-207ENST00000539563 PP632Q6XCG6 107 aa3.49□□□□□ -1.85
LSAMP-207ENST00000539563 HYDINQ4G0P3 5121 aa3.49□□□□□ -1.85
LSAMP-207ENST00000539563 KMT2CQ8NEZ4 4911 aaKnown RBP3.46□□□□□ -1.86
LSAMP-207ENST00000539563 KRTAP1-4P0C5Y4 121 aa3.46□□□□□ -1.86
LSAMP-207ENST00000539563 XP32Q5T750 250 aa3.46□□□□□ -1.86
LSAMP-207ENST00000539563 TPRXLQ17RH7 258 aa3.45□□□□□ -1.86
LSAMP-207ENST00000539563 MEGF8Q7Z7M0 2845 aa3.44□□□□□ -1.86
LSAMP-207ENST00000539563 NDUFAF8A1L188 74 aa3.43□□□□□ -1.86
LSAMP-207ENST00000539563 C10orf95Q9H7T3 257 aa3.43□□□□□ -1.86
LSAMP-207ENST00000539563 FBN1P35555 2871 aaKnown RBP3.43□□□□□ -1.86
LSAMP-207ENST00000539563 KRTAP10-8P60410 259 aa3.41□□□□□ -1.86
LSAMP-207ENST00000539563 DNAH9Q9NYC9 4486 aa3.4□□□□□ -1.86
LSAMP-207ENST00000539563 FRAS1Q86XX4 4008 aa3.39□□□□□ -1.87
LSAMP-207ENST00000539563 DNAH2Q9P225 4427 aa3.39□□□□□ -1.87
LSAMP-207ENST00000539563 RYR2Q92736 4967 aa3.39□□□□□ -1.87
LSAMP-207ENST00000539563 H0YAA0 97 aa3.39□□□□□ -1.87
LSAMP-207ENST00000539563 PRO2289Q9P1D8 64 aa3.38□□□□□ -1.87
LSAMP-207ENST00000539563 HIVEP1P15822 2718 aa3.38□□□□□ -1.87
LSAMP-207ENST00000539563 STARD9Q9P2P6 4700 aa3.38□□□□□ -1.87
LSAMP-207ENST00000539563 PKD1P98161 4303 aa3.37□□□□□ -1.87
LSAMP-207ENST00000539563 A0A1B0GVY2 172 aa3.36□□□□□ -1.87
LSAMP-207ENST00000539563 KRTAP13-3Q3SY46 172 aa3.36□□□□□ -1.87
LSAMP-207ENST00000539563 DNAH11Q96DT5 4516 aa3.34□□□□□ -1.87
LSAMP-207ENST00000539563 KRTAP10-10P60014 251 aa3.34□□□□□ -1.87
LSAMP-207ENST00000539563 FAT2Q9NYQ8 4349 aa3.33□□□□□ -1.88
LSAMP-207ENST00000539563 P0C880 135 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms