RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 A8MU10 97 aa10.29□□□□□ -0.76
PCDHB17P-201ENST00000539533 Q5VV11 94 aa10.28□□□□□ -0.76
PCDHB17P-201ENST00000539533 ANAPC11Q9NYG5 84 aa10.25□□□□□ -0.77
PCDHB17P-201ENST00000539533 CASC2Q6XLA1 102 aa10.24□□□□□ -0.77
PCDHB17P-201ENST00000539533 RYR3Q15413 4870 aa10.24□□□□□ -0.77
PCDHB17P-201ENST00000539533 LINC00483Q53H64 154 aa10.24□□□□□ -0.77
PCDHB17P-201ENST00000539533 ZNF706Q9Y5V0 76 aaPredicted RBP10.23□□□□□ -0.77
PCDHB17P-201ENST00000539533 IGLV9-49A0A0B4J1Y8 123 aa10.22□□□□□ -0.77
PCDHB17P-201ENST00000539533 A8MWP4 228 aa10.22□□□□□ -0.77
PCDHB17P-201ENST00000539533 H0Y9P7 68 aa10.22□□□□□ -0.77
PCDHB17P-201ENST00000539533 LINC00472Q9H8W2 130 aa10.22□□□□□ -0.77
PCDHB17P-201ENST00000539533 VPS13BQ7Z7G8 4022 aa10.22□□□□□ -0.77
PCDHB17P-201ENST00000539533 CHKB-CPT1BH3BT56 60 aa10.21□□□□□ -0.77
PCDHB17P-201ENST00000539533 Q8N9P0 234 aaPredicted RBP10.21□□□□□ -0.77
PCDHB17P-201ENST00000539533 SPANXA2-OT1Q8N9U9 137 aa10.2□□□□□ -0.78
PCDHB17P-201ENST00000539533 H3BPC8 53 aa10.19□□□□□ -0.78
PCDHB17P-201ENST00000539533 LIMD2Q9BT23 127 aa10.18□□□□□ -0.78
PCDHB17P-201ENST00000539533 PRR15LQ9BU68 103 aa10.18□□□□□ -0.78
PCDHB17P-201ENST00000539533 APOBP04114 4563 aaKnown RBP10.16□□□□□ -0.78
PCDHB17P-201ENST00000539533 CD164Q04900 197 aa10.15□□□□□ -0.78
PCDHB17P-201ENST00000539533 SMR3BP02814 79 aaPredicted RBP10.15□□□□□ -0.79
PCDHB17P-201ENST00000539533 MOBPQ13875 183 aa10.13□□□□□ -0.79
PCDHB17P-201ENST00000539533 SPTSSBQ8NFR3 76 aa10.12□□□□□ -0.79
PCDHB17P-201ENST00000539533 MMP24-AS1A0A0U1RRL7 71 aa10.11□□□□□ -0.79
PCDHB17P-201ENST00000539533 FAT1Q14517 4588 aa10.1□□□□□ -0.79
PCDHB17P-201ENST00000539533 LCA10Q71F78 164 aa10.08□□□□□ -0.8
PCDHB17P-201ENST00000539533 KTN1-AS1Q86SY8 53 aa10.08□□□□□ -0.8
PCDHB17P-201ENST00000539533 COA5Q86WW8 74 aa10.08□□□□□ -0.8
PCDHB17P-201ENST00000539533 Q75L30 129 aa10.07□□□□□ -0.8
PCDHB17P-201ENST00000539533 A6NED7 52 aa10.07□□□□□ -0.8
PCDHB17P-201ENST00000539533 A0A087X002 238 aa10.05□□□□□ -0.8
PCDHB17P-201ENST00000539533 ATP11AUNQ6ZP68 121 aa10.04□□□□□ -0.8
PCDHB17P-201ENST00000539533 KRTAP1-4P0C5Y4 121 aa10.03□□□□□ -0.8
PCDHB17P-201ENST00000539533 Q96NJ1 140 aa10.03□□□□□ -0.8
PCDHB17P-201ENST00000539533 LOC101927531A0A1B0GV80 90 aa10.03□□□□□ -0.8
PCDHB17P-201ENST00000539533 IGLV7-46A0A075B6I9 117 aa10.02□□□□□ -0.81
PCDHB17P-201ENST00000539533 KRTAP13-2Q52LG2 175 aa10.01□□□□□ -0.81
PCDHB17P-201ENST00000539533 ASB16-AS1Q495Z4 193 aa10.01□□□□□ -0.81
PCDHB17P-201ENST00000539533 PCOTHQ58A44 107 aa10□□□□□ -0.81
PCDHB17P-201ENST00000539533 RBM12B-AS1Q9P1G2 102 aa9.99□□□□□ -0.81
PCDHB17P-201ENST00000539533 KRTAP10-4P60372 401 aaPredicted RBP9.99□□□□□ -0.81
PCDHB17P-201ENST00000539533 SPINK6Q6UWN8 80 aa9.99□□□□□ -0.81
PCDHB17P-201ENST00000539533 TP53AIP1Q9HCN2 124 aa9.98□□□□□ -0.81
PCDHB17P-201ENST00000539533 A6NN06 94 aa9.97□□□□□ -0.81
PCDHB17P-201ENST00000539533 PLA2G1BP04054 148 aaKnown RBP9.97□□□□□ -0.81
PCDHB17P-201ENST00000539533 SSBP3-AS1Q7Z2R9 100 aa9.97□□□□□ -0.81
PCDHB17P-201ENST00000539533 C8orf17Q9NRJ1 99 aa9.97□□□□□ -0.81
PCDHB17P-201ENST00000539533 CDC42SE1Q9NRR8 79 aa9.96□□□□□ -0.81
PCDHB17P-201ENST00000539533 NDUFS5O43920 106 aa9.95□□□□□ -0.82
PCDHB17P-201ENST00000539533 SPAG11AQ6PDA7 123 aa9.94□□□□□ -0.82
PCDHB17P-201ENST00000539533 LINC01558Q9Y6Z2 57 aa9.92□□□□□ -0.82
PCDHB17P-201ENST00000539533 IGHV6-1A0A0B4J1U7 121 aa9.92□□□□□ -0.82
PCDHB17P-201ENST00000539533 A0A1B0GVX0 72 aa9.92□□□□□ -0.82
PCDHB17P-201ENST00000539533 HSPG2P98160 4391 aa9.9□□□□□ -0.82
PCDHB17P-201ENST00000539533 CDK2AP2O75956 126 aa9.87□□□□□ -0.83
PCDHB17P-201ENST00000539533 EPPK1P58107 5090 aaKnown RBP9.87□□□□□ -0.83
PCDHB17P-201ENST00000539533 PRR26Q8N8Z3 221 aa9.87□□□□□ -0.83
PCDHB17P-201ENST00000539533 TYMSOSQ8TAI1 123 aa9.86□□□□□ -0.83
PCDHB17P-201ENST00000539533 MRPL34Q9BQ48 92 aaKnown RBP9.86□□□□□ -0.83
PCDHB17P-201ENST00000539533 RYR1P21817 5038 aa9.85□□□□□ -0.83
PCDHB17P-201ENST00000539533 FAM229AH3BQW9 127 aa9.85□□□□□ -0.83
PCDHB17P-201ENST00000539533 SPINK7P58062 85 aa9.85□□□□□ -0.83
PCDHB17P-201ENST00000539533 C7orf65Q6ZTY9 151 aa9.85□□□□□ -0.83
PCDHB17P-201ENST00000539533 HRES1P13985 223 aa9.83□□□□□ -0.84
PCDHB17P-201ENST00000539533 NOTCH2NLQ7Z3S9 236 aa9.83□□□□□ -0.84
PCDHB17P-201ENST00000539533 KIAA1109Q2LD37 5005 aa9.81□□□□□ -0.84
PCDHB17P-201ENST00000539533 Q5VSD8 79 aa9.8□□□□□ -0.84
PCDHB17P-201ENST00000539533 KRTAP17-1Q9BYP8 105 aa9.8□□□□□ -0.84
PCDHB17P-201ENST00000539533 C4orf48Q5BLP8 95 aa9.77□□□□□ -0.85
PCDHB17P-201ENST00000539533 PKHD1L1Q86WI1 4243 aa9.74□□□□□ -0.85
PCDHB17P-201ENST00000539533 LINC00304Q8N9R0 145 aa9.73□□□□□ -0.85
PCDHB17P-201ENST00000539533 SPINK1P00995 79 aa9.72□□□□□ -0.85
PCDHB17P-201ENST00000539533 LRP1Q07954 4544 aaKnown RBP9.72□□□□□ -0.85
PCDHB17P-201ENST00000539533 Q5W150 140 aa9.72□□□□□ -0.85
PCDHB17P-201ENST00000539533 KRTAP13-3Q3SY46 172 aa9.7□□□□□ -0.86
PCDHB17P-201ENST00000539533 Q8N1X5 172 aa9.65□□□□□ -0.87
PCDHB17P-201ENST00000539533 LINC00313P59037 77 aa9.63□□□□□ -0.87
PCDHB17P-201ENST00000539533 RPS29P62273 56 aaKnown RBP9.62□□□□□ -0.87
PCDHB17P-201ENST00000539533 C8orf87E5RJ46 101 aa9.6□□□□□ -0.87
PCDHB17P-201ENST00000539533 PRAC1Q96KF2 57 aa9.6□□□□□ -0.87
PCDHB17P-201ENST00000539533 TNXBP22105 4242 aa9.6□□□□□ -0.87
PCDHB17P-201ENST00000539533 FLG2Q5D862 2391 aaPredicted RBP9.59□□□□□ -0.87
PCDHB17P-201ENST00000539533 FAT3Q8TDW7 4589 aa9.59□□□□□ -0.87
PCDHB17P-201ENST00000539533 ACYP2P14621 99 aa9.59□□□□□ -0.87
PCDHB17P-201ENST00000539533 KRTAP10-8P60410 259 aa9.58□□□□□ -0.88
PCDHB17P-201ENST00000539533 MYCBP2O75592 4640 aa9.57□□□□□ -0.88
PCDHB17P-201ENST00000539533 ADM2Q7Z4H4 148 aa9.54□□□□□ -0.88
PCDHB17P-201ENST00000539533 DMAC1Q96GE9 116 aa9.54□□□□□ -0.88
PCDHB17P-201ENST00000539533 RETNLBQ9BQ08 111 aa9.51□□□□□ -0.89
PCDHB17P-201ENST00000539533 KRTAP4-5Q9BYR2 181 aa9.5□□□□□ -0.89
PCDHB17P-201ENST00000539533 A0A1B0GU69 56 aa9.49□□□□□ -0.89
PCDHB17P-201ENST00000539533 IGKV2-30P06310 120 aa9.46□□□□□ -0.89
PCDHB17P-201ENST00000539533 KRTAP16-1A8MUX0 517 aa9.46□□□□□ -0.9
PCDHB17P-201ENST00000539533 MT1HL1P0DM35 61 aa9.45□□□□□ -0.9
PCDHB17P-201ENST00000539533 DMBT1Q9UGM3 2413 aaPredicted RBP9.44□□□□□ -0.9
PCDHB17P-201ENST00000539533 SPATA8Q6RVD6 105 aa9.43□□□□□ -0.9
PCDHB17P-201ENST00000539533 LINC01554Q52M75 96 aa9.41□□□□□ -0.9
PCDHB17P-201ENST00000539533 C9orf92A6NGG3 77 aa9.38□□□□□ -0.91
PCDHB17P-201ENST00000539533 MIR22HGQ0VDD5 57 aa9.38□□□□□ -0.91
PCDHB17P-201ENST00000539533 BIRC6Q9NR09 4857 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 196.4 ms