RNA–Protein interactions for RNA: ENST00000539484.1

CCDC144NL-203, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-203ENST00000539484 RBM12B-AS1Q9P1G2 102 aa4.57□□□□□ -1.68
CCDC144NL-203ENST00000539484 LINC00313P59037 77 aa4.56□□□□□ -1.68
CCDC144NL-203ENST00000539484 H3BMG7 143 aa4.55□□□□□ -1.68
CCDC144NL-203ENST00000539484 FABP2P12104 132 aa4.55□□□□□ -1.68
CCDC144NL-203ENST00000539484 IGKV4-1P06312 121 aa4.53□□□□□ -1.68
CCDC144NL-203ENST00000539484 HIST3H2BBQ8N257 126 aa4.53□□□□□ -1.68
CCDC144NL-203ENST00000539484 HIST1H2BLQ99880 126 aa4.53□□□□□ -1.68
CCDC144NL-203ENST00000539484 A0A1B0GX51 115 aa4.52□□□□□ -1.69
CCDC144NL-203ENST00000539484 COX8AP10176 69 aa4.52□□□□□ -1.69
CCDC144NL-203ENST00000539484 MTURNQ8N3F0 131 aa4.52□□□□□ -1.69
CCDC144NL-203ENST00000539484 A0A0B4J2C4 111 aa4.51□□□□□ -1.69
CCDC144NL-203ENST00000539484 MT2AP02795 61 aa4.51□□□□□ -1.69
CCDC144NL-203ENST00000539484 KRTAP10-10P60014 251 aa4.51□□□□□ -1.69
CCDC144NL-203ENST00000539484 FAM218AQ96MZ4 157 aa4.51□□□□□ -1.69
CCDC144NL-203ENST00000539484 LINC00846Q9NV44 126 aa4.51□□□□□ -1.69
CCDC144NL-203ENST00000539484 ANKRD29Q8N6D5 301 aa4.5□□□□□ -1.69
CCDC144NL-203ENST00000539484 A0A1W2PNM2 257 aa4.49□□□□□ -1.69
CCDC144NL-203ENST00000539484 DLEU1O43261 78 aa4.49□□□□□ -1.69
CCDC144NL-203ENST00000539484 DNAL4O96015 105 aa4.49□□□□□ -1.69
CCDC144NL-203ENST00000539484 TRBV7-4A0A0J9YYF1 115 aa4.48□□□□□ -1.69
CCDC144NL-203ENST00000539484 H3BQ85 93 aa4.48□□□□□ -1.69
CCDC144NL-203ENST00000539484 IGHV6-1A0A0B4J1U7 121 aa4.47□□□□□ -1.69
CCDC144NL-203ENST00000539484 A0A1B0GV72 72 aa4.47□□□□□ -1.69
CCDC144NL-203ENST00000539484 KRTAP16-1A8MUX0 517 aa4.47□□□□□ -1.69
CCDC144NL-203ENST00000539484 TRACP01848 142 aa4.47□□□□□ -1.69
CCDC144NL-203ENST00000539484 MT1FP04733 61 aa4.47□□□□□ -1.69
CCDC144NL-203ENST00000539484 HRES1P13985 223 aa4.47□□□□□ -1.69
CCDC144NL-203ENST00000539484 C14orf144Q96I85 54 aa4.47□□□□□ -1.69
CCDC144NL-203ENST00000539484 ORMDL1Q9P0S3 153 aa4.47□□□□□ -1.69
CCDC144NL-203ENST00000539484 HIGD1BQ9P298 99 aa4.47□□□□□ -1.69
CCDC144NL-203ENST00000539484 PRO1854Q9UHT4 67 aa4.47□□□□□ -1.69
CCDC144NL-203ENST00000539484 DEFB116Q30KQ4 102 aa4.46□□□□□ -1.7
CCDC144NL-203ENST00000539484 TMEM256-PLSCR3K7ERE1 68 aa4.45□□□□□ -1.7
CCDC144NL-203ENST00000539484 SPATA45Q537H7 98 aa4.45□□□□□ -1.7
CCDC144NL-203ENST00000539484 NOTCH2NLQ7Z3S9 236 aa4.45□□□□□ -1.7
CCDC144NL-203ENST00000539484 CEND1Q8N111 149 aa4.45□□□□□ -1.7
CCDC144NL-203ENST00000539484 MPLKIPQ8TAP9 179 aa4.45□□□□□ -1.7
CCDC144NL-203ENST00000539484 PAM16Q9Y3D7 125 aa4.45□□□□□ -1.7
CCDC144NL-203ENST00000539484 USH2AO75445 5202 aa4.45□□□□□ -1.7
CCDC144NL-203ENST00000539484 C8orf87E5RJ46 101 aa4.44□□□□□ -1.7
CCDC144NL-203ENST00000539484 CCKP06307 115 aa4.44□□□□□ -1.7
CCDC144NL-203ENST00000539484 PSMB2P49721 201 aa4.44□□□□□ -1.7
CCDC144NL-203ENST00000539484 TRIAP1O43715 76 aa4.43□□□□□ -1.7
CCDC144NL-203ENST00000539484 COX6CP09669 75 aa4.43□□□□□ -1.7
CCDC144NL-203ENST00000539484 VPS25Q9BRG1 176 aa4.43□□□□□ -1.7
CCDC144NL-203ENST00000539484 VAMP8Q9BV40 100 aa4.43□□□□□ -1.7
CCDC144NL-203ENST00000539484 LINC00472Q9H8W2 130 aa4.43□□□□□ -1.7
CCDC144NL-203ENST00000539484 KRTAP4-3Q9BYR4 195 aa4.42□□□□□ -1.7
CCDC144NL-203ENST00000539484 SSPOA2VEC9 5147 aa4.41□□□□□ -1.7
CCDC144NL-203ENST00000539484 FCGBPQ9Y6R7 5405 aaPredicted RBP4.41□□□□□ -1.7
CCDC144NL-203ENST00000539484 A0A1B0GVX0 72 aa4.41□□□□□ -1.7
CCDC144NL-203ENST00000539484 C2orf91Q6ZV80 131 aa4.41□□□□□ -1.7
CCDC144NL-203ENST00000539484 ZCCHC13Q8WW36 166 aaKnown RBP4.41□□□□□ -1.7
CCDC144NL-203ENST00000539484 FXYD2P54710 66 aa4.4□□□□□ -1.71
CCDC144NL-203ENST00000539484 LYRM7Q5U5X0 104 aa4.4□□□□□ -1.71
CCDC144NL-203ENST00000539484 PCP4L1A6NKN8 68 aa4.39□□□□□ -1.71
CCDC144NL-203ENST00000539484 A8MWP4 228 aa4.39□□□□□ -1.71
CCDC144NL-203ENST00000539484 J3KT08 172 aa4.39□□□□□ -1.71
CCDC144NL-203ENST00000539484 SPINK7P58062 85 aa4.39□□□□□ -1.71
CCDC144NL-203ENST00000539484 UBE2V1Q13404 147 aa4.39□□□□□ -1.71
CCDC144NL-203ENST00000539484 DSCR8Q96T75 97 aa4.39□□□□□ -1.71
CCDC144NL-203ENST00000539484 NDUFB1O75438 58 aa4.38□□□□□ -1.71
CCDC144NL-203ENST00000539484 RBM3P98179 157 aaKnown RBP4.38□□□□□ -1.71
CCDC144NL-203ENST00000539484 KRTAP10-12P60413 245 aa4.36□□□□□ -1.71
CCDC144NL-203ENST00000539484 WFDC13Q8IUB5 93 aa4.36□□□□□ -1.71
CCDC144NL-203ENST00000539484 SCGB1C2P0DMR2 95 aa4.35□□□□□ -1.71
CCDC144NL-203ENST00000539484 HSD52Q0P140 79 aa4.35□□□□□ -1.71
CCDC144NL-203ENST00000539484 KRTAP19-6Q3LI70 58 aa4.35□□□□□ -1.71
CCDC144NL-203ENST00000539484 C9JAW5 83 aa4.34□□□□□ -1.71
CCDC144NL-203ENST00000539484 K7ERJ3 54 aa4.34□□□□□ -1.71
CCDC144NL-203ENST00000539484 SEC61GP60059 68 aa4.33□□□□□ -1.72
CCDC144NL-203ENST00000539484 C5orf47Q569G3 176 aa4.33□□□□□ -1.72
CCDC144NL-203ENST00000539484 C8orf17Q9NRJ1 99 aa4.31□□□□□ -1.72
CCDC144NL-203ENST00000539484 BAALC-AS2P0C853 105 aa4.3□□□□□ -1.72
CCDC144NL-203ENST00000539484 Q6ZQT0 140 aa4.3□□□□□ -1.72
CCDC144NL-203ENST00000539484 IGKV3D-7A0A0C4DH55 119 aa4.29□□□□□ -1.72
CCDC144NL-203ENST00000539484 Q6ZVQ6 151 aa4.29□□□□□ -1.72
CCDC144NL-203ENST00000539484 A0A1B0GW54 56 aa4.27□□□□□ -1.73
CCDC144NL-203ENST00000539484 JMJD7-PLA2G4BH0Y9G9 81 aa4.27□□□□□ -1.73
CCDC144NL-203ENST00000539484 KRTAP5-2Q701N4 177 aa4.27□□□□□ -1.73
CCDC144NL-203ENST00000539484 NDUFS5O43920 106 aa4.26□□□□□ -1.73
CCDC144NL-203ENST00000539484 KRTAP6-3Q3LI67 103 aa4.26□□□□□ -1.73
CCDC144NL-203ENST00000539484 H1FX-AS1Q4G0G2 97 aa4.26□□□□□ -1.73
CCDC144NL-203ENST00000539484 UQCR10Q9UDW1 63 aa4.26□□□□□ -1.73
CCDC144NL-203ENST00000539484 PDE6GP18545 87 aa4.25□□□□□ -1.73
CCDC144NL-203ENST00000539484 MACF1Q9UPN3 7388 aaKnown RBP4.24□□□□□ -1.73
CCDC144NL-203ENST00000539484 ATXN8Q156A1 80 aa4.24□□□□□ -1.73
CCDC144NL-203ENST00000539484 NREPQ16612 68 aa4.24□□□□□ -1.73
CCDC144NL-203ENST00000539484 PRR15Q8IV56 129 aa4.24□□□□□ -1.73
CCDC144NL-203ENST00000539484 MRPL34Q9BQ48 92 aaKnown RBP4.24□□□□□ -1.73
CCDC144NL-203ENST00000539484 TMEM254Q8TBM7 123 aa4.23□□□□□ -1.73
CCDC144NL-203ENST00000539484 LOC110117498A0A087WWA1 95 aa4.22□□□□□ -1.73
CCDC144NL-203ENST00000539484 PYY3Q5JQD4 70 aa4.22□□□□□ -1.73
CCDC144NL-203ENST00000539484 hDV103S1A0JD37 113 aa4.21□□□□□ -1.74
CCDC144NL-203ENST00000539484 SMIM6P0DI80 62 aa4.21□□□□□ -1.74
CCDC144NL-203ENST00000539484 SCGB1A1P11684 91 aa4.21□□□□□ -1.74
CCDC144NL-203ENST00000539484 SYNE2Q8WXH0 6885 aaKnown RBP4.2□□□□□ -1.74
CCDC144NL-203ENST00000539484 MMP24-AS1A0A0U1RRL7 71 aa4.2□□□□□ -1.74
CCDC144NL-203ENST00000539484 A0A1B0GV90 55 aa4.2□□□□□ -1.74
CCDC144NL-203ENST00000539484 C7orf65Q6ZTY9 151 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms