RNA–Protein interactions for RNA: ENST00000539458.1

SLC3A2-213, Transcript of solute carrier family 3 member 2, humanhuman

TSL 5

Gene SLC3A2, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-213ENST00000539458 Q6ZVQ6 151 aa9.49□□□□□ -0.89
SLC3A2-213ENST00000539458 LINC00643Q86TS7 51 aa9.49□□□□□ -0.89
SLC3A2-213ENST00000539458 KRTAP9-2Q9BYQ4 174 aa9.49□□□□□ -0.89
SLC3A2-213ENST00000539458 CXCL6P80162 114 aa9.45□□□□□ -0.9
SLC3A2-213ENST00000539458 LINC00472Q9H8W2 130 aa9.45□□□□□ -0.9
SLC3A2-213ENST00000539458 BPY2O14599 106 aa9.44□□□□□ -0.9
SLC3A2-213ENST00000539458 SEC61BP60468 96 aaKnown RBP9.44□□□□□ -0.9
SLC3A2-213ENST00000539458 SIGMAR1Q99720 223 aa9.43□□□□□ -0.9
SLC3A2-213ENST00000539458 IGKV4-1P06312 121 aa9.42□□□□□ -0.9
SLC3A2-213ENST00000539458 NDUFB1O75438 58 aa9.4□□□□□ -0.9
SLC3A2-213ENST00000539458 DEFB116Q30KQ4 102 aa9.39□□□□□ -0.91
SLC3A2-213ENST00000539458 MUC17Q685J3 4493 aa9.37□□□□□ -0.91
SLC3A2-213ENST00000539458 MUC2Q02817 5179 aa9.37□□□□□ -0.91
SLC3A2-213ENST00000539458 RPL37P61927 97 aaKnown RBP9.36□□□□□ -0.91
SLC3A2-213ENST00000539458 IMUPQ9GZP8 106 aa9.36□□□□□ -0.91
SLC3A2-213ENST00000539458 A8MWP4 228 aa9.34□□□□□ -0.91
SLC3A2-213ENST00000539458 DSCR10P59022 87 aa9.32□□□□□ -0.92
SLC3A2-213ENST00000539458 LCE2AQ5TA79 106 aaPredicted RBP9.32□□□□□ -0.92
SLC3A2-213ENST00000539458 KRTAP9-6A0A140TA67 174 aa9.31□□□□□ -0.92
SLC3A2-213ENST00000539458 PCOTHQ58A44 107 aa9.31□□□□□ -0.92
SLC3A2-213ENST00000539458 LINC00313P59037 77 aa9.3□□□□□ -0.92
SLC3A2-213ENST00000539458 IGHV6-1A0A0B4J1U7 121 aa9.29□□□□□ -0.92
SLC3A2-213ENST00000539458 A0A1B0GVX0 72 aa9.29□□□□□ -0.92
SLC3A2-213ENST00000539458 Q75L30 129 aa9.29□□□□□ -0.92
SLC3A2-213ENST00000539458 PRR15Q8IV56 129 aa9.29□□□□□ -0.92
SLC3A2-213ENST00000539458 IGKV3D-7A0A0C4DH55 119 aa9.28□□□□□ -0.92
SLC3A2-213ENST00000539458 C8orf87E5RJ46 101 aa9.28□□□□□ -0.92
SLC3A2-213ENST00000539458 C20orf166-AS1Q96NR2 134 aa9.27□□□□□ -0.93
SLC3A2-213ENST00000539458 KRTAP4-1Q9BYQ7 146 aa9.27□□□□□ -0.93
SLC3A2-213ENST00000539458 A8MUU9 505 aa9.25□□□□□ -0.93
SLC3A2-213ENST00000539458 KRTAP16-1A8MUX0 517 aa9.25□□□□□ -0.93
SLC3A2-213ENST00000539458 NOTCH2NLQ7Z3S9 236 aa9.25□□□□□ -0.93
SLC3A2-213ENST00000539458 HIST1H4AP62805 103 aaKnown RBP9.24□□□□□ -0.93
SLC3A2-213ENST00000539458 K7EQZ3 153 aa9.22□□□□□ -0.93
SLC3A2-213ENST00000539458 MT-ATP8P03928 68 aa9.22□□□□□ -0.93
SLC3A2-213ENST00000539458 ATP11AUNQ6ZP68 121 aa9.22□□□□□ -0.93
SLC3A2-213ENST00000539458 FAT4Q6V0I7 4981 aa9.2□□□□□ -0.94
SLC3A2-213ENST00000539458 C8orf17Q9NRJ1 99 aa9.18□□□□□ -0.94
SLC3A2-213ENST00000539458 HCG22E2RYF7 251 aa9.17□□□□□ -0.94
SLC3A2-213ENST00000539458 Q8N9L7 120 aa9.15□□□□□ -0.94
SLC3A2-213ENST00000539458 hDV103S1A0JD37 113 aa9.14□□□□□ -0.95
SLC3A2-213ENST00000539458 CASC2Q6XLA1 102 aa9.13□□□□□ -0.95
SLC3A2-213ENST00000539458 TMEM254Q8TBM7 123 aa9.13□□□□□ -0.95
SLC3A2-213ENST00000539458 MMP24-AS1A0A0U1RRL7 71 aa9.12□□□□□ -0.95
SLC3A2-213ENST00000539458 MRPL34Q9BQ48 92 aaKnown RBP9.09□□□□□ -0.95
SLC3A2-213ENST00000539458 SCGB1A1P11684 91 aa9.08□□□□□ -0.96
SLC3A2-213ENST00000539458 SMIM20Q8N5G0 67 aa9.08□□□□□ -0.96
SLC3A2-213ENST00000539458 Q8N9P0 234 aaPredicted RBP9.08□□□□□ -0.96
SLC3A2-213ENST00000539458 A0A087WVE0 104 aa9.07□□□□□ -0.96
SLC3A2-213ENST00000539458 TP53AIP1Q9HCN2 124 aa9.06□□□□□ -0.96
SLC3A2-213ENST00000539458 WFDC13Q8IUB5 93 aa9.05□□□□□ -0.96
SLC3A2-213ENST00000539458 FAM236AA0A1B0GUQ0 79 aa9.03□□□□□ -0.96
SLC3A2-213ENST00000539458 FAM236BA0A1B0GV22 79 aa9.03□□□□□ -0.96
SLC3A2-213ENST00000539458 ATOX1O00244 68 aa9.03□□□□□ -0.96
SLC3A2-213ENST00000539458 ZCCHC13Q8WW36 166 aaKnown RBP9.01□□□□□ -0.97
SLC3A2-213ENST00000539458 KRTAP19-2Q3LHN2 52 aa9□□□□□ -0.97
SLC3A2-213ENST00000539458 LCE2DQ5TA82 110 aaPredicted RBP8.99□□□□□ -0.97
SLC3A2-213ENST00000539458 NDUFS5O43920 106 aa8.97□□□□□ -0.97
SLC3A2-213ENST00000539458 LCE2CQ5TA81 110 aa8.97□□□□□ -0.97
SLC3A2-213ENST00000539458 UQCRQO14949 82 aa8.96□□□□□ -0.98
SLC3A2-213ENST00000539458 CRCT1Q9UGL9 99 aa8.93□□□□□ -0.98
SLC3A2-213ENST00000539458 TRAV7A0A075B6U4 112 aa8.92□□□□□ -0.98
SLC3A2-213ENST00000539458 OCR1Q9BZK8 76 aa8.92□□□□□ -0.98
SLC3A2-213ENST00000539458 COX6B2Q6YFQ2 88 aa8.91□□□□□ -0.98
SLC3A2-213ENST00000539458 C5orf47Q569G3 176 aa8.9□□□□□ -0.98
SLC3A2-213ENST00000539458 SERP2Q8N6R1 65 aa8.87□□□□□ -0.99
SLC3A2-213ENST00000539458 TRAV22A0A0B4J277 110 aa8.86□□□□□ -0.99
SLC3A2-213ENST00000539458 H3BPC8 53 aa8.86□□□□□ -0.99
SLC3A2-213ENST00000539458 SPINK7P58062 85 aa8.86□□□□□ -0.99
SLC3A2-213ENST00000539458 HRES1P13985 223 aa8.85□□□□□ -0.99
SLC3A2-213ENST00000539458 MP68P56378 58 aa8.85□□□□□ -0.99
SLC3A2-213ENST00000539458 MT1HP80294 61 aa8.84□□□□□ -0.99
SLC3A2-213ENST00000539458 ANAPC13Q9BS18 74 aa8.84□□□□□ -0.99
SLC3A2-213ENST00000539458 MPLKIPQ8TAP9 179 aa8.82□□□□□ -1
SLC3A2-213ENST00000539458 Q5W150 140 aa8.81□□□□□ -1
SLC3A2-213ENST00000539458 RBM12B-AS1Q9P1G2 102 aa8.8□□□□□ -1
SLC3A2-213ENST00000539458 H0Y9P7 68 aa8.78□□□□□ -1
SLC3A2-213ENST00000539458 COX7CP15954 63 aa8.78□□□□□ -1
SLC3A2-213ENST00000539458 LOC101927531A0A1B0GV80 90 aa8.77□□□□□ -1.01
SLC3A2-213ENST00000539458 FSIP2Q5CZC0 6907 aa8.77□□□□□ -1.01
SLC3A2-213ENST00000539458 FAM236DA0A1B0GTK5 79 aa8.75□□□□□ -1.01
SLC3A2-213ENST00000539458 FAM236CP0DP71 79 aa8.75□□□□□ -1.01
SLC3A2-213ENST00000539458 IGKV2D-30A0A075B6S6 120 aa8.72□□□□□ -1.01
SLC3A2-213ENST00000539458 IGKV2-30P06310 120 aa8.72□□□□□ -1.01
SLC3A2-213ENST00000539458 C7orf65Q6ZTY9 151 aa8.72□□□□□ -1.01
SLC3A2-213ENST00000539458 C1orf64Q8NEQ6 169 aa8.71□□□□□ -1.02
SLC3A2-213ENST00000539458 M0R2T5 61 aa8.7□□□□□ -1.02
SLC3A2-213ENST00000539458 LINC00208Q96KT6 92 aa8.7□□□□□ -1.02
SLC3A2-213ENST00000539458 KLKP1Q107X0 134 aa8.67□□□□□ -1.02
SLC3A2-213ENST00000539458 NDUFC1O43677 76 aa8.66□□□□□ -1.02
SLC3A2-213ENST00000539458 C20orf197Q8N268 126 aa8.65□□□□□ -1.02
SLC3A2-213ENST00000539458 CYP4F30PQ9H0H9 118 aa8.64□□□□□ -1.03
SLC3A2-213ENST00000539458 FLGP20930 4061 aaPredicted RBP8.63□□□□□ -1.03
SLC3A2-213ENST00000539458 KRTAP10-6P60371 365 aaPredicted RBP8.62□□□□□ -1.03
SLC3A2-213ENST00000539458 LORP23490 312 aaPredicted RBP8.6□□□□□ -1.03
SLC3A2-213ENST00000539458 PCP4P48539 62 aa8.57□□□□□ -1.04
SLC3A2-213ENST00000539458 SNURFQ9Y675 71 aa8.56□□□□□ -1.04
SLC3A2-213ENST00000539458 C4orf26Q17RF5 130 aa8.53□□□□□ -1.04
SLC3A2-213ENST00000539458 CCDC179H3BU77 68 aa8.52□□□□□ -1.05
SLC3A2-213ENST00000539458 H1FX-AS1Q4G0G2 97 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms