RNA–Protein interactions for RNA: ENST00000538367.5

TRA2A-211, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-211ENST00000538367 CHTF8P0CG12 524 aa10.63□□□□□ -0.71
TRA2A-211ENST00000538367 ZNF706Q9Y5V0 76 aaPredicted RBP10.63□□□□□ -0.71
TRA2A-211ENST00000538367 IGLV9-49A0A0B4J1Y8 123 aa10.6□□□□□ -0.71
TRA2A-211ENST00000538367 COL7A1Q02388 2944 aa10.59□□□□□ -0.71
TRA2A-211ENST00000538367 UQCR11O14957 56 aa10.57□□□□□ -0.72
TRA2A-211ENST00000538367 ADM2Q7Z4H4 148 aa10.57□□□□□ -0.72
TRA2A-211ENST00000538367 MIR22HGQ0VDD5 57 aa10.55□□□□□ -0.72
TRA2A-211ENST00000538367 Q5W150 140 aa10.55□□□□□ -0.72
TRA2A-211ENST00000538367 RETNLBQ9BQ08 111 aa10.54□□□□□ -0.72
TRA2A-211ENST00000538367 WWC2-AS2Q96NR7 200 aa10.53□□□□□ -0.72
TRA2A-211ENST00000538367 MEGF8Q7Z7M0 2845 aa10.53□□□□□ -0.72
TRA2A-211ENST00000538367 PRKDCP78527 4128 aaKnown RBP10.53□□□□□ -0.72
TRA2A-211ENST00000538367 NOTCH2NLQ7Z3S9 236 aa10.52□□□□□ -0.72
TRA2A-211ENST00000538367 KRTAP1-5Q9BYS1 174 aa10.52□□□□□ -0.72
TRA2A-211ENST00000538367 STAB2Q8WWQ8 2551 aa10.51□□□□□ -0.73
TRA2A-211ENST00000538367 H3BS24 57 aa10.48□□□□□ -0.73
TRA2A-211ENST00000538367 FAM229AH3BQW9 127 aa10.46□□□□□ -0.73
TRA2A-211ENST00000538367 NUPR2A6NF83 97 aa10.45□□□□□ -0.74
TRA2A-211ENST00000538367 APLNQ9ULZ1 77 aa10.42□□□□□ -0.74
TRA2A-211ENST00000538367 IGKV2-30P06310 120 aa10.41□□□□□ -0.74
TRA2A-211ENST00000538367 SPACA4Q8TDM5 124 aa10.41□□□□□ -0.74
TRA2A-211ENST00000538367 CSAG1Q6PB30 78 aa10.37□□□□□ -0.75
TRA2A-211ENST00000538367 DYNC2H1Q8NCM8 4307 aaKnown RBP10.37□□□□□ -0.75
TRA2A-211ENST00000538367 PANO1I0J062 215 aa10.36□□□□□ -0.75
TRA2A-211ENST00000538367 UBE2DNLQ8IWF7 75 aa10.36□□□□□ -0.75
TRA2A-211ENST00000538367 DNAH7Q8WXX0 4024 aa10.35□□□□□ -0.75
TRA2A-211ENST00000538367 FBN3Q75N90 2809 aa10.35□□□□□ -0.75
TRA2A-211ENST00000538367 SRRM2Q9UQ35 2752 aaKnown RBP10.35□□□□□ -0.75
TRA2A-211ENST00000538367 CSMD3Q7Z407 3707 aa10.34□□□□□ -0.75
TRA2A-211ENST00000538367 IGLV5-52A0A0A0MRZ9 124 aa10.33□□□□□ -0.76
TRA2A-211ENST00000538367 ZNF861PO60384 105 aa10.33□□□□□ -0.76
TRA2A-211ENST00000538367 IGLV7-43P04211 117 aa10.31□□□□□ -0.76
TRA2A-211ENST00000538367 SPINK6Q6UWN8 80 aa10.31□□□□□ -0.76
TRA2A-211ENST00000538367 DNAH10Q8IVF4 4471 aa10.31□□□□□ -0.76
TRA2A-211ENST00000538367 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.28□□□□□ -0.76
TRA2A-211ENST00000538367 STARD9Q9P2P6 4700 aa10.28□□□□□ -0.76
TRA2A-211ENST00000538367 PSORS1C2Q9UIG4 136 aa10.27□□□□□ -0.77
TRA2A-211ENST00000538367 PLECQ15149 4684 aaKnown RBP10.26□□□□□ -0.77
TRA2A-211ENST00000538367 LYSTQ99698 3801 aa10.25□□□□□ -0.77
TRA2A-211ENST00000538367 Q6ZRN7 208 aaPredicted RBP10.25□□□□□ -0.77
TRA2A-211ENST00000538367 SSBP3-AS1Q7Z2R9 100 aa10.25□□□□□ -0.77
TRA2A-211ENST00000538367 IGKV2D-30A0A075B6S6 120 aa10.22□□□□□ -0.77
TRA2A-211ENST00000538367 TGP01266 2768 aa10.21□□□□□ -0.78
TRA2A-211ENST00000538367 NBDYA0A0U1RRE5 68 aa10.21□□□□□ -0.78
TRA2A-211ENST00000538367 ANAPC11Q9NYG5 84 aa10.2□□□□□ -0.78
TRA2A-211ENST00000538367 CIRBP-AS1Q8TBR5 109 aa10.16□□□□□ -0.78
TRA2A-211ENST00000538367 LY6G6CO95867 125 aa10.16□□□□□ -0.78
TRA2A-211ENST00000538367 KRTAP16-1A8MUX0 517 aa10.15□□□□□ -0.78
TRA2A-211ENST00000538367 VPS13DQ5THJ4 4388 aa10.14□□□□□ -0.79
TRA2A-211ENST00000538367 KRTAP25-1Q3LHN0 102 aa10.13□□□□□ -0.79
TRA2A-211ENST00000538367 A8MUU9 505 aa10.13□□□□□ -0.79
TRA2A-211ENST00000538367 C1orf134Q5TEV5 83 aa10.11□□□□□ -0.79
TRA2A-211ENST00000538367 DNAH8Q96JB1 4490 aa10.07□□□□□ -0.8
TRA2A-211ENST00000538367 A0A087WTM6 91 aa10.07□□□□□ -0.8
TRA2A-211ENST00000538367 ROMO1P60602 79 aa10.06□□□□□ -0.8
TRA2A-211ENST00000538367 KMT2AQ03164 3969 aa10□□□□□ -0.81
TRA2A-211ENST00000538367 H0YAA0 97 aa10□□□□□ -0.81
TRA2A-211ENST00000538367 LINC00304Q8N9R0 145 aa9.99□□□□□ -0.81
TRA2A-211ENST00000538367 DNAH6Q9C0G6 4158 aa9.99□□□□□ -0.81
TRA2A-211ENST00000538367 Q6ZSA8 131 aa9.98□□□□□ -0.81
TRA2A-211ENST00000538367 SPINK1P00995 79 aa9.9□□□□□ -0.82
TRA2A-211ENST00000538367 DNAH2Q9P225 4427 aa9.89□□□□□ -0.83
TRA2A-211ENST00000538367 A0A1B0GU33 70 aa9.89□□□□□ -0.83
TRA2A-211ENST00000538367 FRAS1Q86XX4 4008 aa9.86□□□□□ -0.83
TRA2A-211ENST00000538367 KRTAP13-2Q52LG2 175 aa9.86□□□□□ -0.83
TRA2A-211ENST00000538367 H1FX-AS1Q4G0G2 97 aa9.86□□□□□ -0.83
TRA2A-211ENST00000538367 HYDINQ4G0P3 5121 aa9.85□□□□□ -0.83
TRA2A-211ENST00000538367 DNAH17Q9UFH2 4485 aa9.84□□□□□ -0.83
TRA2A-211ENST00000538367 K7ERS5 55 aa9.83□□□□□ -0.84
TRA2A-211ENST00000538367 Q8N1X5 172 aa9.83□□□□□ -0.84
TRA2A-211ENST00000538367 HECTD4Q9Y4D8 3996 aa9.82□□□□□ -0.84
TRA2A-211ENST00000538367 TYMSOSQ8TAI1 123 aa9.79□□□□□ -0.84
TRA2A-211ENST00000538367 SACSQ9NZJ4 4579 aa9.78□□□□□ -0.84
TRA2A-211ENST00000538367 KRTAP10-2P60368 255 aa9.72□□□□□ -0.85
TRA2A-211ENST00000538367 FAT2Q9NYQ8 4349 aa9.68□□□□□ -0.86
TRA2A-211ENST00000538367 P0C880 135 aa9.68□□□□□ -0.86
TRA2A-211ENST00000538367 DNAH11Q96DT5 4516 aa9.67□□□□□ -0.86
TRA2A-211ENST00000538367 KRTAP1-4P0C5Y4 121 aa9.66□□□□□ -0.86
TRA2A-211ENST00000538367 RPS29P62273 56 aaKnown RBP9.66□□□□□ -0.86
TRA2A-211ENST00000538367 RYR2Q92736 4967 aa9.64□□□□□ -0.87
TRA2A-211ENST00000538367 PKD1P98161 4303 aa9.63□□□□□ -0.87
TRA2A-211ENST00000538367 DNAH5Q8TE73 4624 aa9.63□□□□□ -0.87
TRA2A-211ENST00000538367 KMT2CQ8NEZ4 4911 aaKnown RBP9.61□□□□□ -0.87
TRA2A-211ENST00000538367 KRTAP10-1P60331 282 aa9.59□□□□□ -0.87
TRA2A-211ENST00000538367 KRTAP3-1Q9BYR8 98 aa9.59□□□□□ -0.87
TRA2A-211ENST00000538367 COX6B2Q6YFQ2 88 aa9.58□□□□□ -0.88
TRA2A-211ENST00000538367 C20orf166-AS1Q96NR2 134 aa9.56□□□□□ -0.88
TRA2A-211ENST00000538367 A0A1B0GVY2 172 aa9.56□□□□□ -0.88
TRA2A-211ENST00000538367 RPL37P61927 97 aaKnown RBP9.5□□□□□ -0.89
TRA2A-211ENST00000538367 CRIPTQ9P021 101 aa9.49□□□□□ -0.89
TRA2A-211ENST00000538367 SPINT4Q6UDR6 99 aa9.46□□□□□ -0.9
TRA2A-211ENST00000538367 PKHD1P08F94 4074 aa9.46□□□□□ -0.9
TRA2A-211ENST00000538367 RYR3Q15413 4870 aa9.42□□□□□ -0.9
TRA2A-211ENST00000538367 LRP1BQ9NZR2 4599 aa9.4□□□□□ -0.91
TRA2A-211ENST00000538367 TPRXLQ17RH7 258 aa9.38□□□□□ -0.91
TRA2A-211ENST00000538367 DYNC1H1Q14204 4646 aaKnown RBP9.38□□□□□ -0.91
TRA2A-211ENST00000538367 KRTAP15-1Q3LI76 137 aa9.37□□□□□ -0.91
TRA2A-211ENST00000538367 FLG2Q5D862 2391 aaPredicted RBP9.32□□□□□ -0.92
TRA2A-211ENST00000538367 KRTAP10-6P60371 365 aaPredicted RBP9.32□□□□□ -0.92
TRA2A-211ENST00000538367 APOBP04114 4563 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms