RNA–Protein interactions for RNA: ENST00000538144.5

PXN-208, Transcript of paxillin, humanhuman

TSL 1 (best)

Gene PXN, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-208ENST00000538144 TMEM254Q8TBM7 123 aa8.77□□□□□ -1.01
PXN-208ENST00000538144 SNURFQ9Y675 71 aa8.76□□□□□ -1.01
PXN-208ENST00000538144 C4orf48Q5BLP8 95 aa8.75□□□□□ -1.01
PXN-208ENST00000538144 KRTAP29-1A8MX34 341 aaPredicted RBP8.75□□□□□ -1.01
PXN-208ENST00000538144 A8MWP4 228 aa8.73□□□□□ -1.01
PXN-208ENST00000538144 PRR15Q8IV56 129 aa8.73□□□□□ -1.01
PXN-208ENST00000538144 LINC00304Q8N9R0 145 aa8.73□□□□□ -1.01
PXN-208ENST00000538144 Q96NJ1 140 aa8.73□□□□□ -1.01
PXN-208ENST00000538144 KRTAP4-5Q9BYR2 181 aa8.72□□□□□ -1.01
PXN-208ENST00000538144 SERP1Q9Y6X1 66 aa8.71□□□□□ -1.01
PXN-208ENST00000538144 SPINK1P00995 79 aa8.7□□□□□ -1.02
PXN-208ENST00000538144 BIRC6Q9NR09 4857 aa8.7□□□□□ -1.02
PXN-208ENST00000538144 LRP1Q07954 4544 aaKnown RBP8.69□□□□□ -1.02
PXN-208ENST00000538144 OXTP01178 125 aa8.69□□□□□ -1.02
PXN-208ENST00000538144 ATP5EP56381 51 aaPredicted RBP8.69□□□□□ -1.02
PXN-208ENST00000538144 FLG2Q5D862 2391 aaPredicted RBP8.69□□□□□ -1.02
PXN-208ENST00000538144 ZCCHC13Q8WW36 166 aaKnown RBP8.68□□□□□ -1.02
PXN-208ENST00000538144 SPAG11AQ6PDA7 123 aa8.68□□□□□ -1.02
PXN-208ENST00000538144 KRTAP10-8P60410 259 aa8.67□□□□□ -1.02
PXN-208ENST00000538144 LIMD2Q9BT23 127 aa8.67□□□□□ -1.02
PXN-208ENST00000538144 Q5XG85 94 aa8.66□□□□□ -1.02
PXN-208ENST00000538144 ASB16-AS1Q495Z4 193 aa8.65□□□□□ -1.02
PXN-208ENST00000538144 C5orf47Q569G3 176 aa8.65□□□□□ -1.02
PXN-208ENST00000538144 WFDC13Q8IUB5 93 aa8.65□□□□□ -1.02
PXN-208ENST00000538144 MMP24-AS1A0A0U1RRL7 71 aa8.64□□□□□ -1.03
PXN-208ENST00000538144 FAT3Q8TDW7 4589 aa8.64□□□□□ -1.03
PXN-208ENST00000538144 CASC2Q6XLA1 102 aa8.64□□□□□ -1.03
PXN-208ENST00000538144 TNXBP22105 4242 aa8.63□□□□□ -1.03
PXN-208ENST00000538144 RPS29P62273 56 aaKnown RBP8.61□□□□□ -1.03
PXN-208ENST00000538144 C1orf195Q5TG92 126 aa8.61□□□□□ -1.03
PXN-208ENST00000538144 NDUFB1O75438 58 aa8.59□□□□□ -1.03
PXN-208ENST00000538144 MYCBP2O75592 4640 aa8.58□□□□□ -1.04
PXN-208ENST00000538144 SMIM26A0A096LP01 95 aa8.58□□□□□ -1.04
PXN-208ENST00000538144 MT1HL1P0DM35 61 aa8.58□□□□□ -1.04
PXN-208ENST00000538144 C4orf26Q17RF5 130 aa8.57□□□□□ -1.04
PXN-208ENST00000538144 A0A1B0GVX0 72 aa8.56□□□□□ -1.04
PXN-208ENST00000538144 HERC2O95714 4834 aa8.56□□□□□ -1.04
PXN-208ENST00000538144 C8orf17Q9NRJ1 99 aa8.55□□□□□ -1.04
PXN-208ENST00000538144 IGHV6-1A0A0B4J1U7 121 aa8.54□□□□□ -1.04
PXN-208ENST00000538144 hDV103S1A0JD37 113 aa8.54□□□□□ -1.04
PXN-208ENST00000538144 H3BPC8 53 aa8.54□□□□□ -1.04
PXN-208ENST00000538144 RETNLBQ9BQ08 111 aa8.52□□□□□ -1.04
PXN-208ENST00000538144 MP68P56378 58 aa8.52□□□□□ -1.05
PXN-208ENST00000538144 ABCA13Q86UQ4 5058 aa8.51□□□□□ -1.05
PXN-208ENST00000538144 DMBT1Q9UGM3 2413 aaPredicted RBP8.51□□□□□ -1.05
PXN-208ENST00000538144 TRAV22A0A0B4J277 110 aa8.5□□□□□ -1.05
PXN-208ENST00000538144 H0Y9P7 68 aa8.5□□□□□ -1.05
PXN-208ENST00000538144 NOTCH2NLQ7Z3S9 236 aa8.49□□□□□ -1.05
PXN-208ENST00000538144 TP53AIP1Q9HCN2 124 aa8.47□□□□□ -1.05
PXN-208ENST00000538144 FP248Q71RG6 208 aaPredicted RBP8.46□□□□□ -1.06
PXN-208ENST00000538144 LINC00208Q96KT6 92 aa8.46□□□□□ -1.06
PXN-208ENST00000538144 CYP4F30PQ9H0H9 118 aa8.46□□□□□ -1.06
PXN-208ENST00000538144 MRPL34Q9BQ48 92 aaKnown RBP8.44□□□□□ -1.06
PXN-208ENST00000538144 LINC00313P59037 77 aa8.43□□□□□ -1.06
PXN-208ENST00000538144 C8orf87E5RJ46 101 aa8.42□□□□□ -1.06
PXN-208ENST00000538144 SPANXA2-OT1Q8N9U9 137 aa8.41□□□□□ -1.06
PXN-208ENST00000538144 C1orf64Q8NEQ6 169 aa8.41□□□□□ -1.06
PXN-208ENST00000538144 J3QL48 77 aa8.4□□□□□ -1.06
PXN-208ENST00000538144 KRTAP13-3Q3SY46 172 aa8.37□□□□□ -1.07
PXN-208ENST00000538144 C9orf92A6NGG3 77 aa8.36□□□□□ -1.07
PXN-208ENST00000538144 KRTAP16-1A8MUX0 517 aa8.34□□□□□ -1.07
PXN-208ENST00000538144 NDUFS5O43920 106 aa8.34□□□□□ -1.07
PXN-208ENST00000538144 IGLV7-46A0A075B6I9 117 aa8.32□□□□□ -1.08
PXN-208ENST00000538144 MPLKIPQ8TAP9 179 aa8.32□□□□□ -1.08
PXN-208ENST00000538144 PRO0628Q9UI54 55 aa8.32□□□□□ -1.08
PXN-208ENST00000538144 PRR4Q16378 134 aa8.31□□□□□ -1.08
PXN-208ENST00000538144 Q8N9P0 234 aaPredicted RBP8.29□□□□□ -1.08
PXN-208ENST00000538144 Q5W150 140 aa8.28□□□□□ -1.08
PXN-208ENST00000538144 PCLOQ9Y6V0 5065 aa8.27□□□□□ -1.09
PXN-208ENST00000538144 Q1T7F1 81 aa8.26□□□□□ -1.09
PXN-208ENST00000538144 LOC101927531A0A1B0GV80 90 aa8.25□□□□□ -1.09
PXN-208ENST00000538144 PCOTHQ58A44 107 aa8.22□□□□□ -1.09
PXN-208ENST00000538144 V9GYY9 64 aa8.22□□□□□ -1.09
PXN-208ENST00000538144 BRK1Q8WUW1 75 aa8.2□□□□□ -1.1
PXN-208ENST00000538144 C20orf166-AS1Q96NR2 134 aa8.19□□□□□ -1.1
PXN-208ENST00000538144 A8MUU9 505 aa8.19□□□□□ -1.1
PXN-208ENST00000538144 TPRXLQ17RH7 258 aa8.16□□□□□ -1.1
PXN-208ENST00000538144 XP32Q5T750 250 aa8.16□□□□□ -1.1
PXN-208ENST00000538144 COA5Q86WW8 74 aa8.15□□□□□ -1.11
PXN-208ENST00000538144 Q75L30 129 aa8.14□□□□□ -1.11
PXN-208ENST00000538144 IGKV2-30P06310 120 aa8.13□□□□□ -1.11
PXN-208ENST00000538144 LPAP08519 4548 aa8.11□□□□□ -1.11
PXN-208ENST00000538144 HRES1P13985 223 aa8.09□□□□□ -1.11
PXN-208ENST00000538144 RPL37P61927 97 aaKnown RBP8.09□□□□□ -1.11
PXN-208ENST00000538144 PSPHP1O15172 72 aa8.08□□□□□ -1.12
PXN-208ENST00000538144 ATP11AUNQ6ZP68 121 aa8.06□□□□□ -1.12
PXN-208ENST00000538144 DMAC1Q96GE9 116 aa8.04□□□□□ -1.12
PXN-208ENST00000538144 A8MUN3 132 aa8.03□□□□□ -1.12
PXN-208ENST00000538144 HERC1Q15751 4861 aa8.03□□□□□ -1.12
PXN-208ENST00000538144 IGKV2D-30A0A075B6S6 120 aa8.02□□□□□ -1.13
PXN-208ENST00000538144 LRP2P98164 4655 aa8.01□□□□□ -1.13
PXN-208ENST00000538144 Q5VV11 94 aa7.99□□□□□ -1.13
PXN-208ENST00000538144 ACYP2P14621 99 aa7.97□□□□□ -1.13
PXN-208ENST00000538144 PRR15LQ9BU68 103 aa7.96□□□□□ -1.13
PXN-208ENST00000538144 LINC01558Q9Y6Z2 57 aa7.96□□□□□ -1.13
PXN-208ENST00000538144 C7orf65Q6ZTY9 151 aa7.96□□□□□ -1.14
PXN-208ENST00000538144 CHKB-CPT1BH3BT56 60 aa7.94□□□□□ -1.14
PXN-208ENST00000538144 SPINK7P58062 85 aa7.94□□□□□ -1.14
PXN-208ENST00000538144 HMCN2Q8NDA2 5059 aa7.9□□□□□ -1.14
PXN-208ENST00000538144 SEC61BP60468 96 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms