RNA–Protein interactions for RNA: ENST00000537869.5

SNHG1-205, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 1,038 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-205ENST00000537869 HRCT1Q6UXD1 115 aa2.42□□□□□ -2.02
SNHG1-205ENST00000537869 LAMTOR3Q9UHA4 124 aa2.42□□□□□ -2.02
SNHG1-205ENST00000537869 DNAH3Q8TD57 4116 aa2.42□□□□□ -2.02
SNHG1-205ENST00000537869 TRAV10A0A0B4J240 114 aa2.41□□□□□ -2.02
SNHG1-205ENST00000537869 COX7BP24311 80 aa2.41□□□□□ -2.02
SNHG1-205ENST00000537869 HAMPP81172 84 aa2.41□□□□□ -2.02
SNHG1-205ENST00000537869 WFDC9Q8NEX5 89 aa2.41□□□□□ -2.02
SNHG1-205ENST00000537869 DIRC1Q969H9 104 aa2.41□□□□□ -2.02
SNHG1-205ENST00000537869 PKIGQ9Y2B9 76 aa2.41□□□□□ -2.02
SNHG1-205ENST00000537869 TGP01266 2768 aa2.41□□□□□ -2.02
SNHG1-205ENST00000537869 A8MUN3 132 aa2.4□□□□□ -2.03
SNHG1-205ENST00000537869 F8WEM9 126 aa2.4□□□□□ -2.03
SNHG1-205ENST00000537869 M0R378 163 aa2.4□□□□□ -2.03
SNHG1-205ENST00000537869 ANGP03950 147 aaKnown RBP2.4□□□□□ -2.03
SNHG1-205ENST00000537869 DEFB130BP0DP73 79 aa2.4□□□□□ -2.03
SNHG1-205ENST00000537869 DEFB130AP0DP74 79 aa2.4□□□□□ -2.03
SNHG1-205ENST00000537869 MIFP14174 115 aa2.4□□□□□ -2.03
SNHG1-205ENST00000537869 ELOF1P60002 83 aaKnown RBP2.4□□□□□ -2.03
SNHG1-205ENST00000537869 SPAG11BQ08648 103 aa2.4□□□□□ -2.03
SNHG1-205ENST00000537869 LELP1Q5T871 98 aa2.4□□□□□ -2.03
SNHG1-205ENST00000537869 UNQ6190/PRO20217Q6UXQ8 127 aa2.4□□□□□ -2.03
SNHG1-205ENST00000537869 LINC00269Q8N2A0 174 aa2.4□□□□□ -2.03
SNHG1-205ENST00000537869 C11orf68Q9H3H3 251 aaKnown RBP2.4□□□□□ -2.03
SNHG1-205ENST00000537869 PRO2289Q9P1D8 64 aa2.4□□□□□ -2.03
SNHG1-205ENST00000537869 NREPQ16612 68 aa2.39□□□□□ -2.03
SNHG1-205ENST00000537869 TPRXLQ17RH7 258 aa2.39□□□□□ -2.03
SNHG1-205ENST00000537869 C9orf116Q5BN46 136 aaPredicted RBP2.39□□□□□ -2.03
SNHG1-205ENST00000537869 Q6ZQY7 126 aa2.39□□□□□ -2.03
SNHG1-205ENST00000537869 NBEAL2Q6ZNJ1 2754 aa2.38□□□□□ -2.03
SNHG1-205ENST00000537869 M0R2N4 97 aa2.38□□□□□ -2.03
SNHG1-205ENST00000537869 FP248Q71RG6 208 aaPredicted RBP2.38□□□□□ -2.03
SNHG1-205ENST00000537869 TMEM254Q8TBM7 123 aa2.38□□□□□ -2.03
SNHG1-205ENST00000537869 WFDC10AQ9H1F0 79 aa2.38□□□□□ -2.03
SNHG1-205ENST00000537869 DNAH9Q9NYC9 4486 aa2.38□□□□□ -2.03
SNHG1-205ENST00000537869 PRKDCP78527 4128 aaKnown RBP2.37□□□□□ -2.03
SNHG1-205ENST00000537869 LCE6AA0A183 80 aa2.37□□□□□ -2.03
SNHG1-205ENST00000537869 H3BNG1 76 aa2.37□□□□□ -2.03
SNHG1-205ENST00000537869 KRTAP12-1P59990 96 aa2.37□□□□□ -2.03
SNHG1-205ENST00000537869 CLPSL2Q6UWE3 100 aa2.37□□□□□ -2.03
SNHG1-205ENST00000537869 C6orf48Q9UBA6 75 aa2.37□□□□□ -2.03
SNHG1-205ENST00000537869 SNURFQ9Y675 71 aa2.37□□□□□ -2.03
SNHG1-205ENST00000537869 KMT2CQ8NEZ4 4911 aaKnown RBP2.37□□□□□ -2.03
SNHG1-205ENST00000537869 IGLV5-48A0A075B6I7 105 aa2.36□□□□□ -2.03
SNHG1-205ENST00000537869 SPART-AS1P0CW21 52 aa2.36□□□□□ -2.03
SNHG1-205ENST00000537869 KRTAP12-4P60329 112 aa2.36□□□□□ -2.03
SNHG1-205ENST00000537869 PMAIP1Q13794 54 aa2.36□□□□□ -2.03
SNHG1-205ENST00000537869 ESRGQ1W209 222 aa2.36□□□□□ -2.03
SNHG1-205ENST00000537869 KCNQ1DNQ9H478 68 aa2.36□□□□□ -2.03
SNHG1-205ENST00000537869 RYR3Q15413 4870 aa2.36□□□□□ -2.03
SNHG1-205ENST00000537869 A0A096LPF7 62 aa2.35□□□□□ -2.03
SNHG1-205ENST00000537869 Q1T7F1 81 aa2.35□□□□□ -2.03
SNHG1-205ENST00000537869 PCOTHQ58A44 107 aa2.35□□□□□ -2.03
SNHG1-205ENST00000537869 KRTAP26-1Q6PEX3 210 aa2.35□□□□□ -2.03
SNHG1-205ENST00000537869 SPRR4Q96PI1 79 aa2.35□□□□□ -2.03
SNHG1-205ENST00000537869 COL7A1Q02388 2944 aa2.35□□□□□ -2.03
SNHG1-205ENST00000537869 hDV103S1A0JD37 113 aa2.34□□□□□ -2.03
SNHG1-205ENST00000537869 CYP4F30PQ9H0H9 118 aa2.34□□□□□ -2.03
SNHG1-205ENST00000537869 LINC00474Q9P2X8 69 aa2.34□□□□□ -2.03
SNHG1-205ENST00000537869 ETDCA0A1B0GVM5 59 aa2.33□□□□□ -2.04
SNHG1-205ENST00000537869 NDUFB1O75438 58 aa2.33□□□□□ -2.04
SNHG1-205ENST00000537869 XAGE1AQ9HD64 81 aa2.33□□□□□ -2.04
SNHG1-205ENST00000537869 HUWE1Q7Z6Z7 4374 aaKnown RBP2.33□□□□□ -2.04
SNHG1-205ENST00000537869 TENM3Q9P273 2699 aa2.33□□□□□ -2.04
SNHG1-205ENST00000537869 PLECQ15149 4684 aaKnown RBP2.32□□□□□ -2.04
SNHG1-205ENST00000537869 TENM2Q9NT68 2774 aa2.32□□□□□ -2.04
SNHG1-205ENST00000537869 SPRR1AP35321 89 aa2.32□□□□□ -2.04
SNHG1-205ENST00000537869 DEFB135Q30KP9 77 aa2.32□□□□□ -2.04
SNHG1-205ENST00000537869 PRR15Q8IV56 129 aa2.32□□□□□ -2.04
SNHG1-205ENST00000537869 SPACA4Q8TDM5 124 aa2.32□□□□□ -2.04
SNHG1-205ENST00000537869 STAB2Q8WWQ8 2551 aa2.32□□□□□ -2.04
SNHG1-205ENST00000537869 BIRC6Q9NR09 4857 aa2.31□□□□□ -2.04
SNHG1-205ENST00000537869 KRTAP13-4Q3LI77 160 aa2.31□□□□□ -2.04
SNHG1-205ENST00000537869 LINC01556Q5JQF7 62 aa2.31□□□□□ -2.04
SNHG1-205ENST00000537869 C1orf137Q5JT78 98 aa2.31□□□□□ -2.04
SNHG1-205ENST00000537869 Q6ZRX8 168 aa2.31□□□□□ -2.04
SNHG1-205ENST00000537869 BRK1Q8WUW1 75 aa2.31□□□□□ -2.04
SNHG1-205ENST00000537869 HCG22E2RYF7 251 aa2.3□□□□□ -2.04
SNHG1-205ENST00000537869 DNAH7Q8WXX0 4024 aa2.3□□□□□ -2.04
SNHG1-205ENST00000537869 DEFB4AO15263 64 aa2.29□□□□□ -2.04
SNHG1-205ENST00000537869 HTN3P15516 51 aa2.29□□□□□ -2.04
SNHG1-205ENST00000537869 DEFB105AQ8NG35 78 aa2.29□□□□□ -2.04
SNHG1-205ENST00000537869 DYNC2H1Q8NCM8 4307 aaKnown RBP2.28□□□□□ -2.04
SNHG1-205ENST00000537869 TRAV22A0A0B4J277 110 aa2.28□□□□□ -2.04
SNHG1-205ENST00000537869 KTN1-AS1Q86SY8 53 aa2.28□□□□□ -2.04
SNHG1-205ENST00000537869 WFDC10BQ8IUB3 73 aa2.28□□□□□ -2.04
SNHG1-205ENST00000537869 LIMD2Q9BT23 127 aa2.28□□□□□ -2.04
SNHG1-205ENST00000537869 SACSQ9NZJ4 4579 aa2.27□□□□□ -2.05
SNHG1-205ENST00000537869 UBE2BP63146 152 aa2.27□□□□□ -2.05
SNHG1-205ENST00000537869 DNAH1Q9P2D7 4330 aa2.26□□□□□ -2.05
SNHG1-205ENST00000537869 K7EQZ3 153 aa2.26□□□□□ -2.05
SNHG1-205ENST00000537869 SPRR1BP22528 89 aa2.26□□□□□ -2.05
SNHG1-205ENST00000537869 VPS13DQ5THJ4 4388 aa2.26□□□□□ -2.05
SNHG1-205ENST00000537869 STARD9Q9P2P6 4700 aa2.26□□□□□ -2.05
SNHG1-205ENST00000537869 LOC101927531A0A1B0GV80 90 aa2.25□□□□□ -2.05
SNHG1-205ENST00000537869 C9orf163Q8N9P6 203 aa2.25□□□□□ -2.05
SNHG1-205ENST00000537869 CSMD3Q7Z407 3707 aa2.24□□□□□ -2.05
SNHG1-205ENST00000537869 DEFB131BA0A096LNP1 70 aa2.24□□□□□ -2.05
SNHG1-205ENST00000537869 H0Y9P7 68 aa2.24□□□□□ -2.05
SNHG1-205ENST00000537869 K7EIL1 84 aa2.24□□□□□ -2.05
SNHG1-205ENST00000537869 Q5VV11 94 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms