RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 KRTAP10-2P60368 255 aa13.06□□□□□ -0.32
TRIM3-214ENST00000536344 FAT2Q9NYQ8 4349 aa13.04□□□□□ -0.32
TRIM3-214ENST00000536344 ALMS1Q8TCU4 4167 aa13.03□□□□□ -0.32
TRIM3-214ENST00000536344 MOBPQ13875 183 aa13.03□□□□□ -0.32
TRIM3-214ENST00000536344 CDC42SE1Q9NRR8 79 aa13.02□□□□□ -0.33
TRIM3-214ENST00000536344 SACSQ9NZJ4 4579 aa13.01□□□□□ -0.33
TRIM3-214ENST00000536344 SPINK7P58062 85 aa13□□□□□ -0.33
TRIM3-214ENST00000536344 H3BPC8 53 aa12.99□□□□□ -0.33
TRIM3-214ENST00000536344 PKD1P98161 4303 aa12.99□□□□□ -0.33
TRIM3-214ENST00000536344 IGLV7-46A0A075B6I9 117 aa12.99□□□□□ -0.33
TRIM3-214ENST00000536344 NDUFS5O43920 106 aa12.98□□□□□ -0.33
TRIM3-214ENST00000536344 H0Y9J4 135 aa12.97□□□□□ -0.33
TRIM3-214ENST00000536344 A8MWP4 228 aa12.97□□□□□ -0.33
TRIM3-214ENST00000536344 LINC00472Q9H8W2 130 aa12.96□□□□□ -0.34
TRIM3-214ENST00000536344 PKHD1P08F94 4074 aa12.95□□□□□ -0.34
TRIM3-214ENST00000536344 IGLV8-61A0A075B6I0 122 aa12.93□□□□□ -0.34
TRIM3-214ENST00000536344 PSORS1C2Q9UIG4 136 aa12.93□□□□□ -0.34
TRIM3-214ENST00000536344 MMP24-AS1A0A0U1RRL7 71 aa12.92□□□□□ -0.34
TRIM3-214ENST00000536344 C7orf65Q6ZTY9 151 aa12.92□□□□□ -0.34
TRIM3-214ENST00000536344 LINC01558Q9Y6Z2 57 aa12.9□□□□□ -0.35
TRIM3-214ENST00000536344 ANAPC11Q9NYG5 84 aa12.88□□□□□ -0.35
TRIM3-214ENST00000536344 PLAC8Q9NZF1 115 aa12.88□□□□□ -0.35
TRIM3-214ENST00000536344 LRP1BQ9NZR2 4599 aa12.88□□□□□ -0.35
TRIM3-214ENST00000536344 KMT2CQ8NEZ4 4911 aaKnown RBP12.87□□□□□ -0.35
TRIM3-214ENST00000536344 KRTAP13-1Q8IUC0 172 aa12.86□□□□□ -0.35
TRIM3-214ENST00000536344 KRTAP10-1P60331 282 aa12.85□□□□□ -0.35
TRIM3-214ENST00000536344 CIRBP-AS1Q8TBR5 109 aa12.85□□□□□ -0.35
TRIM3-214ENST00000536344 HRES1P13985 223 aa12.84□□□□□ -0.35
TRIM3-214ENST00000536344 PRAC1Q96KF2 57 aa12.83□□□□□ -0.35
TRIM3-214ENST00000536344 IGLV9-49A0A0B4J1Y8 123 aa12.81□□□□□ -0.36
TRIM3-214ENST00000536344 ADM2Q7Z4H4 148 aa12.78□□□□□ -0.36
TRIM3-214ENST00000536344 PRR26Q8N8Z3 221 aa12.76□□□□□ -0.37
TRIM3-214ENST00000536344 LINC00313P59037 77 aa12.75□□□□□ -0.37
TRIM3-214ENST00000536344 C8orf87E5RJ46 101 aa12.74□□□□□ -0.37
TRIM3-214ENST00000536344 VPS13BQ7Z7G8 4022 aa12.72□□□□□ -0.37
TRIM3-214ENST00000536344 ZNF861PO60384 105 aa12.71□□□□□ -0.37
TRIM3-214ENST00000536344 SPRR1BP22528 89 aa12.7□□□□□ -0.38
TRIM3-214ENST00000536344 Q96NJ1 140 aa12.7□□□□□ -0.38
TRIM3-214ENST00000536344 RYR2Q92736 4967 aa12.69□□□□□ -0.38
TRIM3-214ENST00000536344 IGLV7-43P04211 117 aa12.67□□□□□ -0.38
TRIM3-214ENST00000536344 IGHV6-1A0A0B4J1U7 121 aa12.67□□□□□ -0.38
TRIM3-214ENST00000536344 ASB16-AS1Q495Z4 193 aa12.66□□□□□ -0.38
TRIM3-214ENST00000536344 C8orf17Q9NRJ1 99 aa12.66□□□□□ -0.38
TRIM3-214ENST00000536344 A0A087X002 238 aa12.66□□□□□ -0.38
TRIM3-214ENST00000536344 NOTCH2NLQ7Z3S9 236 aa12.66□□□□□ -0.38
TRIM3-214ENST00000536344 DYNC1H1Q14204 4646 aaKnown RBP12.64□□□□□ -0.39
TRIM3-214ENST00000536344 TP53AIP1Q9HCN2 124 aa12.63□□□□□ -0.39
TRIM3-214ENST00000536344 Q6ZSA8 131 aa12.62□□□□□ -0.39
TRIM3-214ENST00000536344 C4orf48Q5BLP8 95 aa12.61□□□□□ -0.39
TRIM3-214ENST00000536344 LINC00483Q53H64 154 aa12.56□□□□□ -0.4
TRIM3-214ENST00000536344 ZNF706Q9Y5V0 76 aaPredicted RBP12.55□□□□□ -0.4
TRIM3-214ENST00000536344 FAT1Q14517 4588 aa12.55□□□□□ -0.4
TRIM3-214ENST00000536344 SMR3BP02814 79 aaPredicted RBP12.54□□□□□ -0.4
TRIM3-214ENST00000536344 Q5W150 140 aa12.53□□□□□ -0.4
TRIM3-214ENST00000536344 A0A1B0GVX0 72 aa12.52□□□□□ -0.41
TRIM3-214ENST00000536344 MRPL34Q9BQ48 92 aaKnown RBP12.52□□□□□ -0.41
TRIM3-214ENST00000536344 RYR3Q15413 4870 aa12.51□□□□□ -0.41
TRIM3-214ENST00000536344 LINC01554Q52M75 96 aa12.44□□□□□ -0.42
TRIM3-214ENST00000536344 APOBP04114 4563 aaKnown RBP12.43□□□□□ -0.42
TRIM3-214ENST00000536344 PLA2G1BP04054 148 aaKnown RBP12.43□□□□□ -0.42
TRIM3-214ENST00000536344 A0A1B0GVY2 172 aa12.41□□□□□ -0.42
TRIM3-214ENST00000536344 CDK2AP2O75956 126 aa12.4□□□□□ -0.42
TRIM3-214ENST00000536344 SPINK6Q6UWN8 80 aa12.39□□□□□ -0.43
TRIM3-214ENST00000536344 H3BS24 57 aa12.38□□□□□ -0.43
TRIM3-214ENST00000536344 KRTAP13-2Q52LG2 175 aa12.37□□□□□ -0.43
TRIM3-214ENST00000536344 ACYP2P14621 99 aa12.36□□□□□ -0.43
TRIM3-214ENST00000536344 KRTAP13-3Q3SY46 172 aa12.35□□□□□ -0.43
TRIM3-214ENST00000536344 A0A1B0GU69 56 aa12.34□□□□□ -0.43
TRIM3-214ENST00000536344 RETNLBQ9BQ08 111 aa12.33□□□□□ -0.44
TRIM3-214ENST00000536344 KRTAP1-4P0C5Y4 121 aa12.31□□□□□ -0.44
TRIM3-214ENST00000536344 SPATA8Q6RVD6 105 aa12.29□□□□□ -0.44
TRIM3-214ENST00000536344 CSAG1Q6PB30 78 aa12.26□□□□□ -0.45
TRIM3-214ENST00000536344 MIR22HGQ0VDD5 57 aa12.24□□□□□ -0.45
TRIM3-214ENST00000536344 DMAC1Q96GE9 116 aa12.24□□□□□ -0.45
TRIM3-214ENST00000536344 SSBP3-AS1Q7Z2R9 100 aa12.22□□□□□ -0.45
TRIM3-214ENST00000536344 UQCR11O14957 56 aa12.16□□□□□ -0.46
TRIM3-214ENST00000536344 TYMSOSQ8TAI1 123 aa12.16□□□□□ -0.46
TRIM3-214ENST00000536344 HSPG2P98160 4391 aa12.1□□□□□ -0.47
TRIM3-214ENST00000536344 KRTAP10-4P60372 401 aaPredicted RBP12.1□□□□□ -0.47
TRIM3-214ENST00000536344 KIAA1109Q2LD37 5005 aa12.1□□□□□ -0.47
TRIM3-214ENST00000536344 LRP1Q07954 4544 aaKnown RBP12.1□□□□□ -0.47
TRIM3-214ENST00000536344 EPPK1P58107 5090 aaKnown RBP12.09□□□□□ -0.47
TRIM3-214ENST00000536344 FLG2Q5D862 2391 aaPredicted RBP12.09□□□□□ -0.47
TRIM3-214ENST00000536344 IGKV2-30P06310 120 aa12.01□□□□□ -0.49
TRIM3-214ENST00000536344 PKHD1L1Q86WI1 4243 aa12□□□□□ -0.49
TRIM3-214ENST00000536344 RYR1P21817 5038 aa12□□□□□ -0.49
TRIM3-214ENST00000536344 KRTAP17-1Q9BYP8 105 aa11.97□□□□□ -0.49
TRIM3-214ENST00000536344 LINC00304Q8N9R0 145 aa11.97□□□□□ -0.49
TRIM3-214ENST00000536344 IGKV2D-30A0A075B6S6 120 aa11.95□□□□□ -0.5
TRIM3-214ENST00000536344 FAM229AH3BQW9 127 aa11.95□□□□□ -0.5
TRIM3-214ENST00000536344 SPINK1P00995 79 aa11.95□□□□□ -0.5
TRIM3-214ENST00000536344 MYCBP2O75592 4640 aa11.92□□□□□ -0.5
TRIM3-214ENST00000536344 Q5VSD8 79 aa11.91□□□□□ -0.5
TRIM3-214ENST00000536344 DMBT1Q9UGM3 2413 aaPredicted RBP11.9□□□□□ -0.5
TRIM3-214ENST00000536344 TNXBP22105 4242 aa11.79□□□□□ -0.52
TRIM3-214ENST00000536344 KRTAP16-1A8MUX0 517 aa11.79□□□□□ -0.52
TRIM3-214ENST00000536344 Q8N1X5 172 aa11.79□□□□□ -0.52
TRIM3-214ENST00000536344 C9orf92A6NGG3 77 aa11.75□□□□□ -0.53
TRIM3-214ENST00000536344 H0YAA0 97 aa11.75□□□□□ -0.53
TRIM3-214ENST00000536344 CRIPTQ9P021 101 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms