RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 HRES1P13985 223 aa10.85□□□□□ -0.67
RAB40C-203ENST00000535977 RTL8CO15255 209 aa10.84□□□□□ -0.67
RAB40C-203ENST00000535977 Q6ZR54 194 aa10.84□□□□□ -0.67
RAB40C-203ENST00000535977 LYSTQ99698 3801 aa10.84□□□□□ -0.67
RAB40C-203ENST00000535977 ADM2Q7Z4H4 148 aa10.83□□□□□ -0.68
RAB40C-203ENST00000535977 IGLV5-52A0A0A0MRZ9 124 aa10.8□□□□□ -0.68
RAB40C-203ENST00000535977 H3BS24 57 aa10.79□□□□□ -0.68
RAB40C-203ENST00000535977 IGLV9-49A0A0B4J1Y8 123 aa10.78□□□□□ -0.68
RAB40C-203ENST00000535977 PSORS1C2Q9UIG4 136 aa10.77□□□□□ -0.69
RAB40C-203ENST00000535977 ZNF861PO60384 105 aa10.76□□□□□ -0.69
RAB40C-203ENST00000535977 DNAH7Q8WXX0 4024 aa10.76□□□□□ -0.69
RAB40C-203ENST00000535977 LINC01554Q52M75 96 aa10.75□□□□□ -0.69
RAB40C-203ENST00000535977 C1orf134Q5TEV5 83 aa10.75□□□□□ -0.69
RAB40C-203ENST00000535977 STARD9Q9P2P6 4700 aa10.75□□□□□ -0.69
RAB40C-203ENST00000535977 PLECQ15149 4684 aaKnown RBP10.75□□□□□ -0.69
RAB40C-203ENST00000535977 WWC2-AS2Q96NR7 200 aa10.73□□□□□ -0.69
RAB40C-203ENST00000535977 TP53AIP1Q9HCN2 124 aa10.73□□□□□ -0.69
RAB40C-203ENST00000535977 PLA2G1BP04054 148 aaKnown RBP10.72□□□□□ -0.69
RAB40C-203ENST00000535977 PRR26Q8N8Z3 221 aa10.71□□□□□ -0.69
RAB40C-203ENST00000535977 Q96NJ1 140 aa10.71□□□□□ -0.69
RAB40C-203ENST00000535977 VPS13DQ5THJ4 4388 aa10.7□□□□□ -0.7
RAB40C-203ENST00000535977 ASB16-AS1Q495Z4 193 aa10.69□□□□□ -0.7
RAB40C-203ENST00000535977 SRRM2Q9UQ35 2752 aaKnown RBP10.69□□□□□ -0.7
RAB40C-203ENST00000535977 CDK2AP2O75956 126 aa10.64□□□□□ -0.71
RAB40C-203ENST00000535977 IGLV7-43P04211 117 aa10.63□□□□□ -0.71
RAB40C-203ENST00000535977 C8orf17Q9NRJ1 99 aa10.63□□□□□ -0.71
RAB40C-203ENST00000535977 A0A1B0GVX0 72 aa10.62□□□□□ -0.71
RAB40C-203ENST00000535977 LY6G6CO95867 125 aa10.6□□□□□ -0.71
RAB40C-203ENST00000535977 ANAPC11Q9NYG5 84 aa10.57□□□□□ -0.72
RAB40C-203ENST00000535977 IGHV6-1A0A0B4J1U7 121 aa10.56□□□□□ -0.72
RAB40C-203ENST00000535977 SSBP3-AS1Q7Z2R9 100 aa10.56□□□□□ -0.72
RAB40C-203ENST00000535977 KMT2CQ8NEZ4 4911 aaKnown RBP10.54□□□□□ -0.72
RAB40C-203ENST00000535977 HECTD4Q9Y4D8 3996 aa10.54□□□□□ -0.72
RAB40C-203ENST00000535977 MRPL34Q9BQ48 92 aaKnown RBP10.53□□□□□ -0.72
RAB40C-203ENST00000535977 ALMS1Q8TCU4 4167 aa10.53□□□□□ -0.72
RAB40C-203ENST00000535977 KMT2AQ03164 3969 aa10.51□□□□□ -0.73
RAB40C-203ENST00000535977 SPATA8Q6RVD6 105 aa10.51□□□□□ -0.73
RAB40C-203ENST00000535977 DNAH17Q9UFH2 4485 aa10.5□□□□□ -0.73
RAB40C-203ENST00000535977 ACYP2P14621 99 aa10.49□□□□□ -0.73
RAB40C-203ENST00000535977 CIRBP-AS1Q8TBR5 109 aa10.49□□□□□ -0.73
RAB40C-203ENST00000535977 A0A087X002 238 aa10.48□□□□□ -0.73
RAB40C-203ENST00000535977 NOTCH2NLQ7Z3S9 236 aa10.48□□□□□ -0.73
RAB40C-203ENST00000535977 HYDINQ4G0P3 5121 aa10.48□□□□□ -0.73
RAB40C-203ENST00000535977 A0A1B0GU69 56 aa10.48□□□□□ -0.73
RAB40C-203ENST00000535977 CSAG1Q6PB30 78 aa10.47□□□□□ -0.73
RAB40C-203ENST00000535977 Q5W150 140 aa10.45□□□□□ -0.74
RAB40C-203ENST00000535977 KRTAP10-2P60368 255 aa10.44□□□□□ -0.74
RAB40C-203ENST00000535977 RETNLBQ9BQ08 111 aa10.43□□□□□ -0.74
RAB40C-203ENST00000535977 MIR22HGQ0VDD5 57 aa10.43□□□□□ -0.74
RAB40C-203ENST00000535977 Q6ZSA8 131 aa10.43□□□□□ -0.74
RAB40C-203ENST00000535977 SACSQ9NZJ4 4579 aa10.42□□□□□ -0.74
RAB40C-203ENST00000535977 SPINK6Q6UWN8 80 aa10.4□□□□□ -0.74
RAB40C-203ENST00000535977 DNAH2Q9P225 4427 aa10.4□□□□□ -0.75
RAB40C-203ENST00000535977 KRTAP13-3Q3SY46 172 aa10.39□□□□□ -0.75
RAB40C-203ENST00000535977 DNAH6Q9C0G6 4158 aa10.37□□□□□ -0.75
RAB40C-203ENST00000535977 DMAC1Q96GE9 116 aa10.37□□□□□ -0.75
RAB40C-203ENST00000535977 DNAH8Q96JB1 4490 aa10.37□□□□□ -0.75
RAB40C-203ENST00000535977 UQCR11O14957 56 aa10.36□□□□□ -0.75
RAB40C-203ENST00000535977 RYR3Q15413 4870 aa10.34□□□□□ -0.75
RAB40C-203ENST00000535977 KRTAP10-1P60331 282 aa10.34□□□□□ -0.75
RAB40C-203ENST00000535977 KRTAP13-2Q52LG2 175 aa10.29□□□□□ -0.76
RAB40C-203ENST00000535977 RYR2Q92736 4967 aa10.29□□□□□ -0.76
RAB40C-203ENST00000535977 FRAS1Q86XX4 4008 aa10.28□□□□□ -0.76
RAB40C-203ENST00000535977 FAM229AH3BQW9 127 aa10.24□□□□□ -0.77
RAB40C-203ENST00000535977 KRTAP1-4P0C5Y4 121 aa10.22□□□□□ -0.77
RAB40C-203ENST00000535977 DNAH11Q96DT5 4516 aa10.17□□□□□ -0.78
RAB40C-203ENST00000535977 DNAH5Q8TE73 4624 aa10.17□□□□□ -0.78
RAB40C-203ENST00000535977 SPINK1P00995 79 aa10.15□□□□□ -0.78
RAB40C-203ENST00000535977 TYMSOSQ8TAI1 123 aa10.13□□□□□ -0.79
RAB40C-203ENST00000535977 KRTAP16-1A8MUX0 517 aa10.12□□□□□ -0.79
RAB40C-203ENST00000535977 IGKV2-30P06310 120 aa10.11□□□□□ -0.79
RAB40C-203ENST00000535977 FAT2Q9NYQ8 4349 aa10.09□□□□□ -0.79
RAB40C-203ENST00000535977 PKD1P98161 4303 aa10.08□□□□□ -0.8
RAB40C-203ENST00000535977 RPS29P62273 56 aaKnown RBP10.08□□□□□ -0.8
RAB40C-203ENST00000535977 ROMO1P60602 79 aa10.07□□□□□ -0.8
RAB40C-203ENST00000535977 KRTAP25-1Q3LHN0 102 aa10.06□□□□□ -0.8
RAB40C-203ENST00000535977 PKHD1P08F94 4074 aa10.04□□□□□ -0.8
RAB40C-203ENST00000535977 LRP1BQ9NZR2 4599 aa10.01□□□□□ -0.81
RAB40C-203ENST00000535977 EPPK1P58107 5090 aaKnown RBP10□□□□□ -0.81
RAB40C-203ENST00000535977 LINC00304Q8N9R0 145 aa10□□□□□ -0.81
RAB40C-203ENST00000535977 A8MUU9 505 aa9.99□□□□□ -0.81
RAB40C-203ENST00000535977 IGKV2D-30A0A075B6S6 120 aa9.95□□□□□ -0.82
RAB40C-203ENST00000535977 VPS13BQ7Z7G8 4022 aa9.92□□□□□ -0.82
RAB40C-203ENST00000535977 H0YAA0 97 aa9.91□□□□□ -0.82
RAB40C-203ENST00000535977 A0A1B0GVY2 172 aa9.87□□□□□ -0.83
RAB40C-203ENST00000535977 P0C880 135 aa9.84□□□□□ -0.83
RAB40C-203ENST00000535977 SMR3BP02814 79 aaPredicted RBP9.84□□□□□ -0.83
RAB40C-203ENST00000535977 DYNC1H1Q14204 4646 aaKnown RBP9.83□□□□□ -0.84
RAB40C-203ENST00000535977 CRIPTQ9P021 101 aa9.82□□□□□ -0.84
RAB40C-203ENST00000535977 Q8N1X5 172 aa9.8□□□□□ -0.84
RAB40C-203ENST00000535977 FLG2Q5D862 2391 aaPredicted RBP9.79□□□□□ -0.84
RAB40C-203ENST00000535977 KRTAP10-4P60372 401 aaPredicted RBP9.79□□□□□ -0.84
RAB40C-203ENST00000535977 C20orf166-AS1Q96NR2 134 aa9.76□□□□□ -0.85
RAB40C-203ENST00000535977 KIAA1109Q2LD37 5005 aa9.75□□□□□ -0.85
RAB40C-203ENST00000535977 A0A1B0GU33 70 aa9.71□□□□□ -0.85
RAB40C-203ENST00000535977 APOBP04114 4563 aaKnown RBP9.68□□□□□ -0.86
RAB40C-203ENST00000535977 C9orf92A6NGG3 77 aa9.66□□□□□ -0.86
RAB40C-203ENST00000535977 H1FX-AS1Q4G0G2 97 aa9.65□□□□□ -0.86
RAB40C-203ENST00000535977 FAT1Q14517 4588 aa9.64□□□□□ -0.87
RAB40C-203ENST00000535977 BIRC6Q9NR09 4857 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms