RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 PDE6GP18545 87 aa10.83□□□□□ -0.68
LTBR-205ENST00000535739 A0A1W2PNM2 257 aa10.81□□□□□ -0.68
LTBR-205ENST00000535739 CCKP06307 115 aa10.8□□□□□ -0.68
LTBR-205ENST00000535739 Q6ZQT0 140 aa10.8□□□□□ -0.68
LTBR-205ENST00000535739 Q6Q795 121 aa10.79□□□□□ -0.68
LTBR-205ENST00000535739 TRBV7-7A0A0K0K1E9 115 aa10.78□□□□□ -0.68
LTBR-205ENST00000535739 VPS25Q9BRG1 176 aa10.77□□□□□ -0.69
LTBR-205ENST00000535739 C21orf62-AS1Q17RA5 79 aa10.76□□□□□ -0.69
LTBR-205ENST00000535739 ATP11AUNQ6ZP68 121 aa10.72□□□□□ -0.69
LTBR-205ENST00000535739 Q75L30 129 aa10.72□□□□□ -0.69
LTBR-205ENST00000535739 A0A087WSZ3 146 aa10.7□□□□□ -0.7
LTBR-205ENST00000535739 A0A1B0GW54 56 aa10.69□□□□□ -0.7
LTBR-205ENST00000535739 SS18L2Q9UHA2 77 aa10.66□□□□□ -0.7
LTBR-205ENST00000535739 Q96NJ1 140 aa10.64□□□□□ -0.71
LTBR-205ENST00000535739 NREPQ16612 68 aa10.56□□□□□ -0.72
LTBR-205ENST00000535739 C20orf166-AS1Q96NR2 134 aa10.56□□□□□ -0.72
LTBR-205ENST00000535739 ACYP1P07311 99 aa10.55□□□□□ -0.72
LTBR-205ENST00000535739 LINC00846Q9NV44 126 aa10.55□□□□□ -0.72
LTBR-205ENST00000535739 J3QR89 54 aa10.54□□□□□ -0.72
LTBR-205ENST00000535739 LINC00472Q9H8W2 130 aa10.54□□□□□ -0.72
LTBR-205ENST00000535739 A8MUU9 505 aa10.53□□□□□ -0.72
LTBR-205ENST00000535739 FAM240AA0A1B0GVK7 77 aa10.52□□□□□ -0.73
LTBR-205ENST00000535739 KRTAP9-8Q9BYQ0 159 aa10.51□□□□□ -0.73
LTBR-205ENST00000535739 DEFB116Q30KQ4 102 aa10.5□□□□□ -0.73
LTBR-205ENST00000535739 Q6ZVQ6 151 aa10.5□□□□□ -0.73
LTBR-205ENST00000535739 UBL5Q9BZL1 73 aa10.5□□□□□ -0.73
LTBR-205ENST00000535739 IGKV4-1P06312 121 aa10.47□□□□□ -0.73
LTBR-205ENST00000535739 J3KT08 172 aa10.46□□□□□ -0.73
LTBR-205ENST00000535739 DSCR10P59022 87 aa10.46□□□□□ -0.73
LTBR-205ENST00000535739 USH2AO75445 5202 aa10.44□□□□□ -0.74
LTBR-205ENST00000535739 K7ERU9 68 aa10.43□□□□□ -0.74
LTBR-205ENST00000535739 SIGMAR1Q99720 223 aa10.43□□□□□ -0.74
LTBR-205ENST00000535739 BPY2O14599 106 aa10.42□□□□□ -0.74
LTBR-205ENST00000535739 SSPOA2VEC9 5147 aa10.41□□□□□ -0.74
LTBR-205ENST00000535739 KRTAP16-1A8MUX0 517 aa10.39□□□□□ -0.75
LTBR-205ENST00000535739 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.38□□□□□ -0.75
LTBR-205ENST00000535739 A8MWP4 228 aa10.36□□□□□ -0.75
LTBR-205ENST00000535739 NDUFB1O75438 58 aa10.36□□□□□ -0.75
LTBR-205ENST00000535739 LINC00313P59037 77 aa10.35□□□□□ -0.75
LTBR-205ENST00000535739 KRTAP9-7A8MTY7 169 aa10.34□□□□□ -0.75
LTBR-205ENST00000535739 IGKV3D-7A0A0C4DH55 119 aa10.33□□□□□ -0.76
LTBR-205ENST00000535739 FAM236DA0A1B0GTK5 79 aa10.33□□□□□ -0.76
LTBR-205ENST00000535739 A0A1B0GVX0 72 aa10.33□□□□□ -0.76
LTBR-205ENST00000535739 MT2AP02795 61 aa10.33□□□□□ -0.76
LTBR-205ENST00000535739 FAM236CP0DP71 79 aa10.33□□□□□ -0.76
LTBR-205ENST00000535739 LINC00643Q86TS7 51 aa10.33□□□□□ -0.76
LTBR-205ENST00000535739 IGHV6-1A0A0B4J1U7 121 aa10.32□□□□□ -0.76
LTBR-205ENST00000535739 CXCL6P80162 114 aa10.32□□□□□ -0.76
LTBR-205ENST00000535739 PRR15Q8IV56 129 aa10.31□□□□□ -0.76
LTBR-205ENST00000535739 NOTCH2NLQ7Z3S9 236 aa10.3□□□□□ -0.76
LTBR-205ENST00000535739 K7EQZ3 153 aa10.28□□□□□ -0.76
LTBR-205ENST00000535739 ATP5EP2Q5VTU8 51 aa10.28□□□□□ -0.76
LTBR-205ENST00000535739 HRES1P13985 223 aa10.27□□□□□ -0.77
LTBR-205ENST00000535739 Q8N9L7 120 aa10.27□□□□□ -0.77
LTBR-205ENST00000535739 C8orf87E5RJ46 101 aa10.26□□□□□ -0.77
LTBR-205ENST00000535739 MPLKIPQ8TAP9 179 aa10.26□□□□□ -0.77
LTBR-205ENST00000535739 MT1FP04733 61 aa10.25□□□□□ -0.77
LTBR-205ENST00000535739 RBM12B-AS1Q9P1G2 102 aa10.25□□□□□ -0.77
LTBR-205ENST00000535739 C8orf17Q9NRJ1 99 aa10.23□□□□□ -0.77
LTBR-205ENST00000535739 FCGBPQ9Y6R7 5405 aaPredicted RBP10.22□□□□□ -0.77
LTBR-205ENST00000535739 LCE2BO14633 110 aa10.22□□□□□ -0.77
LTBR-205ENST00000535739 KRTAP10-10P60014 251 aa10.19□□□□□ -0.78
LTBR-205ENST00000535739 KRTAP9-3Q9BYQ3 159 aa10.19□□□□□ -0.78
LTBR-205ENST00000535739 MMP24-AS1A0A0U1RRL7 71 aa10.17□□□□□ -0.78
LTBR-205ENST00000535739 KRTAP19-1Q8IUB9 90 aa10.17□□□□□ -0.78
LTBR-205ENST00000535739 HIST1H4AP62805 103 aaKnown RBP10.16□□□□□ -0.78
LTBR-205ENST00000535739 hDV103S1A0JD37 113 aa10.14□□□□□ -0.79
LTBR-205ENST00000535739 HCG22E2RYF7 251 aa10.12□□□□□ -0.79
LTBR-205ENST00000535739 MT-ATP8P03928 68 aa10.12□□□□□ -0.79
LTBR-205ENST00000535739 CASC2Q6XLA1 102 aa10.11□□□□□ -0.79
LTBR-205ENST00000535739 WFDC13Q8IUB5 93 aa10.11□□□□□ -0.79
LTBR-205ENST00000535739 TMEM254Q8TBM7 123 aa10.11□□□□□ -0.79
LTBR-205ENST00000535739 MRPL34Q9BQ48 92 aaKnown RBP10.09□□□□□ -0.79
LTBR-205ENST00000535739 A0A087WVE0 104 aa10.07□□□□□ -0.8
LTBR-205ENST00000535739 IMUPQ9GZP8 106 aa10.07□□□□□ -0.8
LTBR-205ENST00000535739 Q8N9P0 234 aaPredicted RBP10.06□□□□□ -0.8
LTBR-205ENST00000535739 ZCCHC13Q8WW36 166 aaKnown RBP10.05□□□□□ -0.8
LTBR-205ENST00000535739 SPINK7P58062 85 aa10.03□□□□□ -0.8
LTBR-205ENST00000535739 NDUFS5O43920 106 aa10□□□□□ -0.81
LTBR-205ENST00000535739 MACF1Q9UPN3 7388 aaKnown RBP9.97□□□□□ -0.81
LTBR-205ENST00000535739 TP53AIP1Q9HCN2 124 aa9.9□□□□□ -0.82
LTBR-205ENST00000535739 SYNE2Q8WXH0 6885 aaKnown RBP9.89□□□□□ -0.83
LTBR-205ENST00000535739 SCGB1A1P11684 91 aa9.89□□□□□ -0.83
LTBR-205ENST00000535739 KRTAP19-6Q3LI70 58 aa9.89□□□□□ -0.83
LTBR-205ENST00000535739 FAM236AA0A1B0GUQ0 79 aa9.86□□□□□ -0.83
LTBR-205ENST00000535739 FAM236BA0A1B0GV22 79 aa9.86□□□□□ -0.83
LTBR-205ENST00000535739 Q5W150 140 aa9.85□□□□□ -0.83
LTBR-205ENST00000535739 UQCRQO14949 82 aa9.82□□□□□ -0.84
LTBR-205ENST00000535739 OCR1Q9BZK8 76 aa9.81□□□□□ -0.84
LTBR-205ENST00000535739 SMIM20Q8N5G0 67 aa9.75□□□□□ -0.85
LTBR-205ENST00000535739 ATOX1O00244 68 aa9.74□□□□□ -0.85
LTBR-205ENST00000535739 TRAV22A0A0B4J277 110 aa9.73□□□□□ -0.85
LTBR-205ENST00000535739 TRAV7A0A075B6U4 112 aa9.7□□□□□ -0.86
LTBR-205ENST00000535739 H0Y9P7 68 aa9.7□□□□□ -0.86
LTBR-205ENST00000535739 H1FX-AS1Q4G0G2 97 aa9.7□□□□□ -0.86
LTBR-205ENST00000535739 C5orf47Q569G3 176 aa9.7□□□□□ -0.86
LTBR-205ENST00000535739 IGKV2D-30A0A075B6S6 120 aa9.68□□□□□ -0.86
LTBR-205ENST00000535739 IGKV2-30P06310 120 aa9.68□□□□□ -0.86
LTBR-205ENST00000535739 MP68P56378 58 aa9.66□□□□□ -0.86
LTBR-205ENST00000535739 C7orf65Q6ZTY9 151 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms