RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 HIST1H2BMQ99879 126 aa1.38□□□□□ -2.19
SNHG1-202ENST00000535689 CST9LQ9H4G1 147 aa1.38□□□□□ -2.19
SNHG1-202ENST00000535689 V9GYV3 84 aa1.38□□□□□ -2.19
SNHG1-202ENST00000535689 A0A0G2JQZ4 141 aa1.37□□□□□ -2.19
SNHG1-202ENST00000535689 TRBV10-3A0A0K0K1G6 114 aa1.37□□□□□ -2.19
SNHG1-202ENST00000535689 MYMXA0A1B0GTQ4 84 aa1.37□□□□□ -2.19
SNHG1-202ENST00000535689 C11orf86A6NJI1 115 aa1.37□□□□□ -2.19
SNHG1-202ENST00000535689 A6NN06 94 aa1.37□□□□□ -2.19
SNHG1-202ENST00000535689 ERC2-IT1O76042 136 aa1.37□□□□□ -2.19
SNHG1-202ENST00000535689 NDUFC2O95298 119 aa1.37□□□□□ -2.19
SNHG1-202ENST00000535689 MT1FP04733 61 aa1.37□□□□□ -2.19
SNHG1-202ENST00000535689 KRTAP12-4P60329 112 aa1.37□□□□□ -2.19
SNHG1-202ENST00000535689 NDUFA5Q16718 116 aa1.37□□□□□ -2.19
SNHG1-202ENST00000535689 Q96NJ1 140 aa1.37□□□□□ -2.19
SNHG1-202ENST00000535689 F8WEM9 126 aa1.36□□□□□ -2.19
SNHG1-202ENST00000535689 NCR3O14931 201 aa1.36□□□□□ -2.19
SNHG1-202ENST00000535689 LEPROTO15243 131 aa1.36□□□□□ -2.19
SNHG1-202ENST00000535689 RHEBQ15382 184 aa1.36□□□□□ -2.19
SNHG1-202ENST00000535689 TMEM170BQ5T4T1 132 aa1.36□□□□□ -2.19
SNHG1-202ENST00000535689 KRTAP5-7Q6L8G8 165 aa1.36□□□□□ -2.19
SNHG1-202ENST00000535689 TTTY13Q9BZ97 58 aa1.36□□□□□ -2.19
SNHG1-202ENST00000535689 SMCO4Q9NRQ5 59 aa1.36□□□□□ -2.19
SNHG1-202ENST00000535689 NAT8Q9UHE5 227 aa1.36□□□□□ -2.19
SNHG1-202ENST00000535689 MUC19Q7Z5P9 8384 aa1.35□□□□□ -2.19
SNHG1-202ENST00000535689 TRAV7A0A075B6U4 112 aa1.35□□□□□ -2.19
SNHG1-202ENST00000535689 TRAV23DV6A0A075B6W5 121 aa1.35□□□□□ -2.19
SNHG1-202ENST00000535689 SMIM13P0DJ93 91 aa1.35□□□□□ -2.19
SNHG1-202ENST00000535689 IGLC3P0DOY3 106 aa1.35□□□□□ -2.19
SNHG1-202ENST00000535689 TMEM258P61165 79 aa1.35□□□□□ -2.19
SNHG1-202ENST00000535689 ADIRFQ15847 76 aa1.35□□□□□ -2.19
SNHG1-202ENST00000535689 LYRM7Q5U5X0 104 aa1.35□□□□□ -2.19
SNHG1-202ENST00000535689 Q6JHZ5 121 aa1.35□□□□□ -2.19
SNHG1-202ENST00000535689 TCTE3Q8IZS6 198 aa1.35□□□□□ -2.19
SNHG1-202ENST00000535689 DEFB105AQ8NG35 78 aa1.35□□□□□ -2.19
SNHG1-202ENST00000535689 OBSCN-AS1Q96MR7 158 aa1.35□□□□□ -2.19
SNHG1-202ENST00000535689 NHP2Q9NX24 153 aaKnown RBP1.35□□□□□ -2.19
SNHG1-202ENST00000535689 SS18L2Q9UHA2 77 aa1.35□□□□□ -2.19
SNHG1-202ENST00000535689 MUC12Q9UKN1 5478 aa1.35□□□□□ -2.19
SNHG1-202ENST00000535689 TRBV7-6A0A0J9YX20 115 aa1.34□□□□□ -2.19
SNHG1-202ENST00000535689 PEA15Q15121 130 aa1.34□□□□□ -2.19
SNHG1-202ENST00000535689 HBDP02042 147 aa1.33□□□□□ -2.2
SNHG1-202ENST00000535689 MT-ND4LP03901 98 aa1.33□□□□□ -2.2
SNHG1-202ENST00000535689 COX7BP24311 80 aa1.33□□□□□ -2.2
SNHG1-202ENST00000535689 FXYD2P54710 66 aa1.33□□□□□ -2.2
SNHG1-202ENST00000535689 KRTAP12-1P59990 96 aa1.33□□□□□ -2.2
SNHG1-202ENST00000535689 KTN1-AS1Q86SY8 53 aa1.33□□□□□ -2.2
SNHG1-202ENST00000535689 BAGE3Q86Y29 109 aa1.33□□□□□ -2.2
SNHG1-202ENST00000535689 OR13C6PQ8NH95 151 aa1.33□□□□□ -2.2
SNHG1-202ENST00000535689 TRAV13-2A0A0B4J235 113 aa1.32□□□□□ -2.2
SNHG1-202ENST00000535689 LINC01546A6NGU7 62 aa1.32□□□□□ -2.2
SNHG1-202ENST00000535689 H3BT86 120 aa1.32□□□□□ -2.2
SNHG1-202ENST00000535689 J3QQQ9 107 aa1.32□□□□□ -2.2
SNHG1-202ENST00000535689 ADCYAP1P18509 176 aa1.32□□□□□ -2.2
SNHG1-202ENST00000535689 HIST3H2BBQ8N257 126 aa1.32□□□□□ -2.2
SNHG1-202ENST00000535689 COPS9Q8WXC6 57 aa1.32□□□□□ -2.2
SNHG1-202ENST00000535689 IMUPQ9GZP8 106 aa1.32□□□□□ -2.2
SNHG1-202ENST00000535689 PRO2289Q9P1D8 64 aa1.32□□□□□ -2.2
SNHG1-202ENST00000535689 TRBV7-7A0A0K0K1E9 115 aa1.31□□□□□ -2.2
SNHG1-202ENST00000535689 SNCGO76070 127 aa1.31□□□□□ -2.2
SNHG1-202ENST00000535689 C3orf79P0CE67 100 aa1.31□□□□□ -2.2
SNHG1-202ENST00000535689 SPRR2EP22531 72 aa1.31□□□□□ -2.2
SNHG1-202ENST00000535689 SPRR2BP35325 72 aa1.31□□□□□ -2.2
SNHG1-202ENST00000535689 SPRR2AP35326 72 aa1.31□□□□□ -2.2
SNHG1-202ENST00000535689 ELOF1P60002 83 aaKnown RBP1.31□□□□□ -2.2
SNHG1-202ENST00000535689 Q5VV11 94 aa1.31□□□□□ -2.2
SNHG1-202ENST00000535689 SPANXDQ9BXN6 97 aa1.31□□□□□ -2.2
SNHG1-202ENST00000535689 NEBP20929 6669 aa1.3□□□□□ -2.2
SNHG1-202ENST00000535689 KMT2DO14686 5537 aa1.3□□□□□ -2.2
SNHG1-202ENST00000535689 IGLV5-48A0A075B6I7 105 aa1.3□□□□□ -2.2
SNHG1-202ENST00000535689 TRAV12-1A0A0B4J245 112 aa1.3□□□□□ -2.2
SNHG1-202ENST00000535689 S100PP25815 95 aa1.3□□□□□ -2.2
SNHG1-202ENST00000535689 PPDPFLQ8WWR9 84 aa1.3□□□□□ -2.2
SNHG1-202ENST00000535689 CLEC2BQ92478 149 aa1.3□□□□□ -2.2
SNHG1-202ENST00000535689 SNHG12Q9BXW3 62 aa1.3□□□□□ -2.2
SNHG1-202ENST00000535689 SPANXCQ9NY87 97 aa1.3□□□□□ -2.2
SNHG1-202ENST00000535689 MDN1Q9NU22 5596 aa1.3□□□□□ -2.2
SNHG1-202ENST00000535689 OCIAD2Q56VL3 154 aa1.29□□□□□ -2.2
SNHG1-202ENST00000535689 LCA10Q71F78 164 aa1.29□□□□□ -2.2
SNHG1-202ENST00000535689 TEN1Q86WV5 123 aa1.29□□□□□ -2.2
SNHG1-202ENST00000535689 DSCR8Q96T75 97 aa1.29□□□□□ -2.2
SNHG1-202ENST00000535689 SEC11CQ9BY50 192 aa1.29□□□□□ -2.2
SNHG1-202ENST00000535689 BATF3Q9NR55 127 aa1.29□□□□□ -2.2
SNHG1-202ENST00000535689 A0A1B0GV72 72 aa1.28□□□□□ -2.2
SNHG1-202ENST00000535689 LINC01554Q52M75 96 aa1.28□□□□□ -2.2
SNHG1-202ENST00000535689 SPRR2FQ96RM1 72 aa1.28□□□□□ -2.2
SNHG1-202ENST00000535689 C12orf57Q99622 126 aa1.28□□□□□ -2.2
SNHG1-202ENST00000535689 HIST1H2BLQ99880 126 aa1.28□□□□□ -2.2
SNHG1-202ENST00000535689 NAA38Q9BRA0 125 aaKnown RBP1.28□□□□□ -2.2
SNHG1-202ENST00000535689 FAM236AA0A1B0GUQ0 79 aa1.27□□□□□ -2.21
SNHG1-202ENST00000535689 FAM236BA0A1B0GV22 79 aa1.27□□□□□ -2.21
SNHG1-202ENST00000535689 SPRR2DP22532 72 aa1.27□□□□□ -2.21
SNHG1-202ENST00000535689 PLNP26678 52 aa1.27□□□□□ -2.21
SNHG1-202ENST00000535689 SPINK7P58062 85 aa1.27□□□□□ -2.21
SNHG1-202ENST00000535689 H1FX-AS1Q4G0G2 97 aa1.27□□□□□ -2.21
SNHG1-202ENST00000535689 SOSTDC1Q6X4U4 206 aa1.27□□□□□ -2.21
SNHG1-202ENST00000535689 IFI27L1Q96BM0 104 aa1.27□□□□□ -2.21
SNHG1-202ENST00000535689 hADV29S1A0JD25 119 aa1.26□□□□□ -2.21
SNHG1-202ENST00000535689 TIMM17BO60830 172 aa1.26□□□□□ -2.21
SNHG1-202ENST00000535689 TRGC2P03986 189 aa1.26□□□□□ -2.21
SNHG1-202ENST00000535689 KRTAP13-4Q3LI77 160 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms