RNA–Protein interactions for RNA: ENST00000534794.1

RSF1-212, Transcript of remodeling and spacing factor 1, humanhuman

TSL 3

Gene RSF1, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-212ENST00000534794 OTOGQ6ZRI0 2925 aa0.61□□□□□ -2.31
RSF1-212ENST00000534794 AKAP13Q12802 2813 aa0.6□□□□□ -2.31
RSF1-212ENST00000534794 AHNAK2Q8IVF2 5795 aa0.6□□□□□ -2.31
RSF1-212ENST00000534794 SRRM2Q9UQ35 2752 aaKnown RBP0.6□□□□□ -2.31
RSF1-212ENST00000534794 NCOR1O75376 2440 aa0.6□□□□□ -2.31
RSF1-212ENST00000534794 CREBBPQ92793 2442 aa0.6□□□□□ -2.31
RSF1-212ENST00000534794 TENM3Q9P273 2699 aa0.59□□□□□ -2.31
RSF1-212ENST00000534794 A0A096LNI7 61 aa0.59□□□□□ -2.31
RSF1-212ENST00000534794 STATHP02808 62 aa0.59□□□□□ -2.31
RSF1-212ENST00000534794 RPS29P62273 56 aaKnown RBP0.59□□□□□ -2.31
RSF1-212ENST00000534794 DEFB136Q30KP8 78 aa0.59□□□□□ -2.31
RSF1-212ENST00000534794 APC2O95996 2303 aa0.58□□□□□ -2.32
RSF1-212ENST00000534794 KRTAP8-1Q8IUC2 63 aa0.58□□□□□ -2.32
RSF1-212ENST00000534794 MGAQ8IWI9 3026 aa0.57□□□□□ -2.32
RSF1-212ENST00000534794 HECTD1Q9ULT8 2610 aa0.57□□□□□ -2.32
RSF1-212ENST00000534794 PRM1P04553 51 aa0.57□□□□□ -2.32
RSF1-212ENST00000534794 SETD2Q9BYW2 2564 aaPredicted RBP0.57□□□□□ -2.32
RSF1-212ENST00000534794 FBN2P35556 2912 aa0.57□□□□□ -2.32
RSF1-212ENST00000534794 TNRC18O15417 2968 aaPredicted RBP0.57□□□□□ -2.32
RSF1-212ENST00000534794 NBASA2RRP1 2371 aa0.56□□□□□ -2.32
RSF1-212ENST00000534794 CHD6Q8TD26 2715 aa0.56□□□□□ -2.32
RSF1-212ENST00000534794 DEFB133Q30KQ1 61 aa0.56□□□□□ -2.32
RSF1-212ENST00000534794 LINC01556Q5JQF7 62 aa0.56□□□□□ -2.32
RSF1-212ENST00000534794 ATRQ13535 2644 aa0.55□□□□□ -2.32
RSF1-212ENST00000534794 MAP1BP46821 2468 aaKnown RBP0.55□□□□□ -2.32
RSF1-212ENST00000534794 CACNA1AO00555 2505 aa0.55□□□□□ -2.32
RSF1-212ENST00000534794 KRTAP19-3Q7Z4W3 81 aa0.55□□□□□ -2.32
RSF1-212ENST00000534794 DEFB108BQ8NET1 73 aa0.55□□□□□ -2.32
RSF1-212ENST00000534794 HIVEP3Q5T1R4 2406 aa0.55□□□□□ -2.32
RSF1-212ENST00000534794 PIEZO1Q92508 2521 aa0.55□□□□□ -2.32
RSF1-212ENST00000534794 NCOR2Q9Y618 2525 aa0.55□□□□□ -2.32
RSF1-212ENST00000534794 USP24Q9UPU5 2620 aa0.54□□□□□ -2.32
RSF1-212ENST00000534794 SPRR2DP22532 72 aa0.54□□□□□ -2.32
RSF1-212ENST00000534794 SPRR2BP35325 72 aa0.54□□□□□ -2.32
RSF1-212ENST00000534794 CRYBG3Q68DQ2 2970 aa0.54□□□□□ -2.32
RSF1-212ENST00000534794 ITPR3Q14573 2671 aa0.54□□□□□ -2.32
RSF1-212ENST00000534794 TNXBP22105 4242 aa0.53□□□□□ -2.32
RSF1-212ENST00000534794 CSMD3Q7Z407 3707 aa0.53□□□□□ -2.32
RSF1-212ENST00000534794 PDZD2O15018 2839 aa0.53□□□□□ -2.32
RSF1-212ENST00000534794 FRYQ5TBA9 3013 aa0.53□□□□□ -2.32
RSF1-212ENST00000534794 CD52P31358 61 aa0.53□□□□□ -2.32
RSF1-212ENST00000534794 DMBT1Q9UGM3 2413 aaPredicted RBP0.53□□□□□ -2.33
RSF1-212ENST00000534794 BDP1A6H8Y1 2624 aa0.52□□□□□ -2.33
RSF1-212ENST00000534794 PTPN13Q12923 2485 aa0.52□□□□□ -2.33
RSF1-212ENST00000534794 USP9YO00507 2555 aaPredicted RBP0.51□□□□□ -2.33
RSF1-212ENST00000534794 GCN1Q92616 2671 aaKnown RBP0.51□□□□□ -2.33
RSF1-212ENST00000534794 A0A096LPF7 62 aa0.51□□□□□ -2.33
RSF1-212ENST00000534794 ACANP16112 2415 aa0.51□□□□□ -2.33
RSF1-212ENST00000534794 NF1P21359 2839 aa0.51□□□□□ -2.33
RSF1-212ENST00000534794 APCP25054 2843 aa0.51□□□□□ -2.33
RSF1-212ENST00000534794 SPRR2AP35326 72 aa0.51□□□□□ -2.33
RSF1-212ENST00000534794 MTORP42345 2549 aa0.51□□□□□ -2.33
RSF1-212ENST00000534794 VPS13DQ5THJ4 4388 aa0.51□□□□□ -2.33
RSF1-212ENST00000534794 WDR87Q6ZQQ6 2873 aa0.51□□□□□ -2.33
RSF1-212ENST00000534794 FLNCQ14315 2725 aa0.51□□□□□ -2.33
RSF1-212ENST00000534794 NSD1Q96L73 2696 aaPredicted RBP0.51□□□□□ -2.33
RSF1-212ENST00000534794 MUC5BQ9HC84 5762 aaPredicted RBP0.5□□□□□ -2.33
RSF1-212ENST00000534794 STAB1Q9NY15 2570 aa0.5□□□□□ -2.33
RSF1-212ENST00000534794 MT1AP04731 61 aa0.5□□□□□ -2.33
RSF1-212ENST00000534794 CHD8Q9HCK8 2581 aa0.5□□□□□ -2.33
RSF1-212ENST00000534794 RANBP2P49792 3224 aaKnown RBP0.49□□□□□ -2.33
RSF1-212ENST00000534794 NOTCH1P46531 2555 aa0.49□□□□□ -2.33
RSF1-212ENST00000534794 LRRK2Q5S007 2527 aa0.49□□□□□ -2.33
RSF1-212ENST00000534794 FAM186AA6NE01 2351 aa0.49□□□□□ -2.33
RSF1-212ENST00000534794 COL7A1Q02388 2944 aa0.49□□□□□ -2.33
RSF1-212ENST00000534794 AHNAKQ09666 5890 aaKnown RBP0.48□□□□□ -2.33
RSF1-212ENST00000534794 CELSR3Q9NYQ7 3312 aa0.48□□□□□ -2.33
RSF1-212ENST00000534794 ACACBO00763 2458 aa0.48□□□□□ -2.33
RSF1-212ENST00000534794 SETXQ7Z333 2677 aaKnown RBP0.48□□□□□ -2.33
RSF1-212ENST00000534794 FRYLO94915 3013 aa0.48□□□□□ -2.33
RSF1-212ENST00000534794 ZZEF1O43149 2961 aa0.48□□□□□ -2.33
RSF1-212ENST00000534794 EPG5Q9HCE0 2579 aa0.48□□□□□ -2.33
RSF1-212ENST00000534794 KMT2AQ03164 3969 aa0.47□□□□□ -2.33
RSF1-212ENST00000534794 ZFHX4Q86UP3 3567 aa0.47□□□□□ -2.33
RSF1-212ENST00000534794 SACSQ9NZJ4 4579 aa0.47□□□□□ -2.33
RSF1-212ENST00000534794 DNAH11Q96DT5 4516 aa0.47□□□□□ -2.33
RSF1-212ENST00000534794 NBPF19A0A087WUL8 3843 aa0.47□□□□□ -2.33
RSF1-212ENST00000534794 SMR3BP02814 79 aaPredicted RBP0.47□□□□□ -2.33
RSF1-212ENST00000534794 RELNP78509 3460 aa0.47□□□□□ -2.33
RSF1-212ENST00000534794 COL12A1Q99715 3063 aa0.47□□□□□ -2.33
RSF1-212ENST00000534794 TACC2O95359 2948 aa0.47□□□□□ -2.33
RSF1-212ENST00000534794 MYCBP2O75592 4640 aa0.47□□□□□ -2.33
RSF1-212ENST00000534794 VPS13BQ7Z7G8 4022 aa0.47□□□□□ -2.33
RSF1-212ENST00000534794 NIPBLQ6KC79 2804 aaeCLIP0.46□□□□□ -2.346e-6■■■□□ 17.7
RSF1-212ENST00000534794 PKD1L1Q8TDX9 2849 aa0.46□□□□□ -2.34
RSF1-212ENST00000534794 CEP250Q9BV73 2442 aa0.46□□□□□ -2.34
RSF1-212ENST00000534794 ANKRD11Q6UB99 2663 aaPredicted RBP0.46□□□□□ -2.34
RSF1-212ENST00000534794 KRTAP21-1Q3LI58 79 aa0.46□□□□□ -2.34
RSF1-212ENST00000534794 KRTAP19-5Q3LI72 72 aa0.46□□□□□ -2.34
RSF1-212ENST00000534794 RIF1Q5UIP0 2472 aaKnown RBP0.46□□□□□ -2.34
RSF1-212ENST00000534794 DCHS2Q6V1P9 2916 aa0.46□□□□□ -2.34
RSF1-212ENST00000534794 PRKDCP78527 4128 aaKnown RBP0.46□□□□□ -2.34
RSF1-212ENST00000534794 COL6A3P12111 3177 aa0.45□□□□□ -2.34
RSF1-212ENST00000534794 SPRR2FQ96RM1 72 aa0.45□□□□□ -2.34
RSF1-212ENST00000534794 CFAP54Q96N23 3096 aa0.45□□□□□ -2.34
RSF1-212ENST00000534794 TEP1Q99973 2627 aaKnown RBP0.45□□□□□ -2.34
RSF1-212ENST00000534794 UNC79Q9P2D8 2635 aa0.45□□□□□ -2.34
RSF1-212ENST00000534794 AKAP9Q99996 3911 aa0.45□□□□□ -2.34
RSF1-212ENST00000534794 FRAS1Q86XX4 4008 aa0.44□□□□□ -2.34
RSF1-212ENST00000534794 ZNF469Q96JG9 3925 aaPredicted RBP0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms