RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 DEFB108BQ8NET1 73 aa2.56□□□□□ -2
ITGB1-219ENST00000534049 TP53AIP1Q9HCN2 124 aa2.56□□□□□ -2
ITGB1-219ENST00000534049 TOMM7Q9P0U1 55 aa2.56□□□□□ -2
ITGB1-219ENST00000534049 ARHGAP32A7KAX9 2087 aa2.55□□□□□ -2
ITGB1-219ENST00000534049 CCL3L1P16619 93 aa2.55□□□□□ -2
ITGB1-219ENST00000534049 LUZP6Q538Z0 58 aa2.55□□□□□ -2
ITGB1-219ENST00000534049 LYPD2Q6UXB3 125 aa2.55□□□□□ -2
ITGB1-219ENST00000534049 C20orf166-AS1Q96NR2 134 aa2.55□□□□□ -2
ITGB1-219ENST00000534049 C8orf17Q9NRJ1 99 aa2.55□□□□□ -2
ITGB1-219ENST00000534049 SACSQ9NZJ4 4579 aa2.55□□□□□ -2
ITGB1-219ENST00000534049 TGP01266 2768 aa2.55□□□□□ -2
ITGB1-219ENST00000534049 NUPR2A6NF83 97 aa2.54□□□□□ -2
ITGB1-219ENST00000534049 A8MWP4 228 aa2.54□□□□□ -2
ITGB1-219ENST00000534049 ZNF861PO60384 105 aa2.54□□□□□ -2
ITGB1-219ENST00000534049 CMC4P56277 68 aaPredicted RBP2.54□□□□□ -2
ITGB1-219ENST00000534049 PRB3Q04118 309 aaPredicted RBP2.54□□□□□ -2
ITGB1-219ENST00000534049 EGFEM1PQ0D2K5 195 aa2.54□□□□□ -2
ITGB1-219ENST00000534049 DEFB104AQ8WTQ1 72 aa2.54□□□□□ -2
ITGB1-219ENST00000534049 ZNRD1Q9P1U0 126 aa2.54□□□□□ -2
ITGB1-219ENST00000534049 KLK12Q9UKR0 248 aa2.54□□□□□ -2
ITGB1-219ENST00000534049 DYNC2H1Q8NCM8 4307 aaKnown RBP2.54□□□□□ -2
ITGB1-219ENST00000534049 RYR2Q92736 4967 aa2.53□□□□□ -2
ITGB1-219ENST00000534049 WNK1Q9H4A3 2382 aa2.53□□□□□ -2
ITGB1-219ENST00000534049 A0A1B0GU69 56 aa2.53□□□□□ -2
ITGB1-219ENST00000534049 H3BUA1 57 aa2.53□□□□□ -2
ITGB1-219ENST00000534049 LCE1CQ5T751 118 aa2.53□□□□□ -2
ITGB1-219ENST00000534049 LCE1BQ5T7P3 118 aa2.53□□□□□ -2
ITGB1-219ENST00000534049 CAMK2N1Q7Z7J9 78 aa2.53□□□□□ -2
ITGB1-219ENST00000534049 C7orf33Q8WU49 177 aa2.53□□□□□ -2
ITGB1-219ENST00000534049 ODF3BA8MYP8 253 aa2.52□□□□□ -2.01
ITGB1-219ENST00000534049 KRTAP4-16G5E9R7 235 aaPredicted RBP2.52□□□□□ -2.01
ITGB1-219ENST00000534049 K7EQZ3 153 aa2.52□□□□□ -2.01
ITGB1-219ENST00000534049 P0C880 135 aa2.52□□□□□ -2.01
ITGB1-219ENST00000534049 ACYP2P14621 99 aa2.52□□□□□ -2.01
ITGB1-219ENST00000534049 KRTAP10-1P60331 282 aa2.52□□□□□ -2.01
ITGB1-219ENST00000534049 KRTAP26-1Q6PEX3 210 aa2.52□□□□□ -2.01
ITGB1-219ENST00000534049 Q8N9W7 124 aa2.52□□□□□ -2.01
ITGB1-219ENST00000534049 USMG5Q96IX5 58 aa2.52□□□□□ -2.01
ITGB1-219ENST00000534049 MINOS1-NBL1R4GNA1 71 aa2.52□□□□□ -2.01
ITGB1-219ENST00000534049 DNAH7Q8WXX0 4024 aa2.52□□□□□ -2.01
ITGB1-219ENST00000534049 HUWE1Q7Z6Z7 4374 aaKnown RBP2.52□□□□□ -2.01
ITGB1-219ENST00000534049 WNK2Q9Y3S1 2297 aa2.52□□□□□ -2.01
ITGB1-219ENST00000534049 TRGV1A0A0A0MS02 117 aa2.51□□□□□ -2.01
ITGB1-219ENST00000534049 A6NDX4 124 aa2.51□□□□□ -2.01
ITGB1-219ENST00000534049 HRES1P13985 223 aa2.51□□□□□ -2.01
ITGB1-219ENST00000534049 BRD3OSQ6XYD6 125 aa2.51□□□□□ -2.01
ITGB1-219ENST00000534049 PLXNB1O43157 2135 aa2.5□□□□□ -2.01
ITGB1-219ENST00000534049 STARD9Q9P2P6 4700 aa2.5□□□□□ -2.01
ITGB1-219ENST00000534049 TNCP24821 2201 aa2.5□□□□□ -2.01
ITGB1-219ENST00000534049 MUC4Q99102 2169 aa2.49□□□□□ -2.01
ITGB1-219ENST00000534049 IGKV3-7A0A075B6H7 116 aa2.49□□□□□ -2.01
ITGB1-219ENST00000534049 IGLV8-61A0A075B6I0 122 aa2.49□□□□□ -2.01
ITGB1-219ENST00000534049 GVQW2A0A096LPI5 108 aaPredicted RBP2.49□□□□□ -2.01
ITGB1-219ENST00000534049 A8MTW9 85 aa2.49□□□□□ -2.01
ITGB1-219ENST00000534049 Q5W150 140 aa2.49□□□□□ -2.01
ITGB1-219ENST00000534049 RHPN1-AS1Q9BWJ2 59 aa2.49□□□□□ -2.01
ITGB1-219ENST00000534049 NBEAL2Q6ZNJ1 2754 aa2.49□□□□□ -2.01
ITGB1-219ENST00000534049 DNAH1Q9P2D7 4330 aa2.49□□□□□ -2.01
ITGB1-219ENST00000534049 BIRC6Q9NR09 4857 aa2.48□□□□□ -2.01
ITGB1-219ENST00000534049 STAB2Q8WWQ8 2551 aa2.48□□□□□ -2.01
ITGB1-219ENST00000534049 A8MUU9 505 aa2.48□□□□□ -2.01
ITGB1-219ENST00000534049 INSP01308 110 aa2.48□□□□□ -2.01
ITGB1-219ENST00000534049 ANGP03950 147 aaKnown RBP2.48□□□□□ -2.01
ITGB1-219ENST00000534049 TLX1NBP0CAT3 122 aa2.48□□□□□ -2.01
ITGB1-219ENST00000534049 C16orf74Q96GX8 76 aa2.48□□□□□ -2.01
ITGB1-219ENST00000534049 EPPK1P58107 5090 aaKnown RBP2.48□□□□□ -2.01
ITGB1-219ENST00000534049 IGKV3OR2-268A0A0C4DH90 116 aa2.47□□□□□ -2.01
ITGB1-219ENST00000534049 DEFB131AP59861 70 aa2.47□□□□□ -2.01
ITGB1-219ENST00000534049 WFDC13Q8IUB5 93 aa2.47□□□□□ -2.01
ITGB1-219ENST00000534049 LYSTQ99698 3801 aa2.47□□□□□ -2.01
ITGB1-219ENST00000534049 COL7A1Q02388 2944 aa2.46□□□□□ -2.02
ITGB1-219ENST00000534049 ALMS1Q8TCU4 4167 aa2.46□□□□□ -2.02
ITGB1-219ENST00000534049 IGLV7-43P04211 117 aa2.46□□□□□ -2.02
ITGB1-219ENST00000534049 PLECQ15149 4684 aaKnown RBP2.46□□□□□ -2.02
ITGB1-219ENST00000534049 WFDC10BQ8IUB3 73 aa2.46□□□□□ -2.02
ITGB1-219ENST00000534049 C4orf3Q8WVX3 66 aa2.46□□□□□ -2.02
ITGB1-219ENST00000534049 TENM3Q9P273 2699 aa2.46□□□□□ -2.02
ITGB1-219ENST00000534049 IGKV2-24A0A0C4DH68 120 aa2.45□□□□□ -2.02
ITGB1-219ENST00000534049 SPINK13Q1W4C9 94 aa2.45□□□□□ -2.02
ITGB1-219ENST00000534049 SPINT4Q6UDR6 99 aa2.45□□□□□ -2.02
ITGB1-219ENST00000534049 LINC00472Q9H8W2 130 aa2.45□□□□□ -2.02
ITGB1-219ENST00000534049 HYDINQ4G0P3 5121 aa2.44□□□□□ -2.02
ITGB1-219ENST00000534049 H3BUX3 64 aa2.44□□□□□ -2.02
ITGB1-219ENST00000534049 C6orf48Q9UBA6 75 aa2.44□□□□□ -2.02
ITGB1-219ENST00000534049 CSMD3Q7Z407 3707 aa2.43□□□□□ -2.02
ITGB1-219ENST00000534049 A0A1B0GVX0 72 aa2.43□□□□□ -2.02
ITGB1-219ENST00000534049 LY6EQ16553 131 aa2.43□□□□□ -2.02
ITGB1-219ENST00000534049 PCOTHQ58A44 107 aa2.42□□□□□ -2.02
ITGB1-219ENST00000534049 C10orf99Q6UWK7 81 aa2.42□□□□□ -2.02
ITGB1-219ENST00000534049 PP632Q6XCG6 107 aa2.42□□□□□ -2.02
ITGB1-219ENST00000534049 HECTD4Q9Y4D8 3996 aa2.41□□□□□ -2.02
ITGB1-219ENST00000534049 PANO1I0J062 215 aa2.41□□□□□ -2.02
ITGB1-219ENST00000534049 K7EIL1 84 aa2.41□□□□□ -2.02
ITGB1-219ENST00000534049 DEFB1P60022 68 aa2.41□□□□□ -2.02
ITGB1-219ENST00000534049 CIRBP-AS1Q8TBR5 109 aa2.41□□□□□ -2.02
ITGB1-219ENST00000534049 HERC2O95714 4834 aa2.4□□□□□ -2.02
ITGB1-219ENST00000534049 FRAS1Q86XX4 4008 aa2.4□□□□□ -2.03
ITGB1-219ENST00000534049 A0A087WTM6 91 aa2.4□□□□□ -2.03
ITGB1-219ENST00000534049 LY6G6CO95867 125 aa2.4□□□□□ -2.03
ITGB1-219ENST00000534049 DEFB116Q30KQ4 102 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms