RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 SMIM29Q86T20 159 aa6.78□□□□□ -1.32
CAPRIN1-213ENST00000533562 PRO0628Q9UI54 55 aa6.78□□□□□ -1.32
CAPRIN1-213ENST00000533562 hADV29S1A0JD25 119 aa6.76□□□□□ -1.33
CAPRIN1-213ENST00000533562 DNAL4O96015 105 aa6.76□□□□□ -1.33
CAPRIN1-213ENST00000533562 PCOTHQ58A44 107 aa6.76□□□□□ -1.33
CAPRIN1-213ENST00000533562 SMIM11BQ8TCY0 68 aa6.76□□□□□ -1.33
CAPRIN1-213ENST00000533562 ATP5EP56381 51 aaPredicted RBP6.75□□□□□ -1.33
CAPRIN1-213ENST00000533562 IGLV8-61A0A075B6I0 122 aa6.74□□□□□ -1.33
CAPRIN1-213ENST00000533562 BAALC-AS2P0C853 105 aa6.74□□□□□ -1.33
CAPRIN1-213ENST00000533562 C1orf195Q5TG92 126 aa6.74□□□□□ -1.33
CAPRIN1-213ENST00000533562 SERP1Q9Y6X1 66 aa6.74□□□□□ -1.33
CAPRIN1-213ENST00000533562 H0YGX0 51 aa6.73□□□□□ -1.33
CAPRIN1-213ENST00000533562 F8WEM9 126 aa6.72□□□□□ -1.33
CAPRIN1-213ENST00000533562 CLEC2BQ92478 149 aa6.72□□□□□ -1.33
CAPRIN1-213ENST00000533562 A0A0G2JQZ4 141 aa6.71□□□□□ -1.34
CAPRIN1-213ENST00000533562 KRTAP9-6A0A140TA67 174 aa6.71□□□□□ -1.34
CAPRIN1-213ENST00000533562 NDUFC1O43677 76 aa6.71□□□□□ -1.34
CAPRIN1-213ENST00000533562 LINC00575Q6W349 94 aa6.7□□□□□ -1.34
CAPRIN1-213ENST00000533562 OBSCN-AS1Q96MR7 158 aa6.69□□□□□ -1.34
CAPRIN1-213ENST00000533562 FAM236DA0A1B0GTK5 79 aa6.68□□□□□ -1.34
CAPRIN1-213ENST00000533562 FAM236CP0DP71 79 aa6.68□□□□□ -1.34
CAPRIN1-213ENST00000533562 SMIM26A0A096LP01 95 aa6.67□□□□□ -1.34
CAPRIN1-213ENST00000533562 JMJD7-PLA2G4BH0Y9G9 81 aa6.67□□□□□ -1.34
CAPRIN1-213ENST00000533562 H3BQ85 93 aa6.67□□□□□ -1.34
CAPRIN1-213ENST00000533562 Q6ZQY7 126 aa6.67□□□□□ -1.34
CAPRIN1-213ENST00000533562 KRTAP19-2Q3LHN2 52 aa6.66□□□□□ -1.34
CAPRIN1-213ENST00000533562 RPL37P61927 97 aaKnown RBP6.65□□□□□ -1.34
CAPRIN1-213ENST00000533562 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.64□□□□□ -1.35
CAPRIN1-213ENST00000533562 TRAV7A0A075B6U4 112 aa6.63□□□□□ -1.35
CAPRIN1-213ENST00000533562 MT1HP80294 61 aa6.63□□□□□ -1.35
CAPRIN1-213ENST00000533562 FSIP2Q5CZC0 6907 aa6.62□□□□□ -1.35
CAPRIN1-213ENST00000533562 CCKP06307 115 aa6.62□□□□□ -1.35
CAPRIN1-213ENST00000533562 C4orf26Q17RF5 130 aa6.62□□□□□ -1.35
CAPRIN1-213ENST00000533562 IGFL1Q6UW32 110 aa6.62□□□□□ -1.35
CAPRIN1-213ENST00000533562 DSCR8Q96T75 97 aa6.62□□□□□ -1.35
CAPRIN1-213ENST00000533562 KLKP1Q107X0 134 aa6.61□□□□□ -1.35
CAPRIN1-213ENST00000533562 UBL5Q9BZL1 73 aa6.61□□□□□ -1.35
CAPRIN1-213ENST00000533562 ORMDL1Q9P0S3 153 aa6.6□□□□□ -1.35
CAPRIN1-213ENST00000533562 V9GYY9 64 aa6.6□□□□□ -1.35
CAPRIN1-213ENST00000533562 PDE6GP18545 87 aa6.59□□□□□ -1.35
CAPRIN1-213ENST00000533562 TMEM256-PLSCR3K7ERE1 68 aa6.58□□□□□ -1.36
CAPRIN1-213ENST00000533562 COX6B2Q6YFQ2 88 aa6.58□□□□□ -1.36
CAPRIN1-213ENST00000533562 KRTAP23-1A1A580 65 aa6.57□□□□□ -1.36
CAPRIN1-213ENST00000533562 LINC00846Q9NV44 126 aa6.57□□□□□ -1.36
CAPRIN1-213ENST00000533562 IGKV3D-7A0A0C4DH55 119 aa6.56□□□□□ -1.36
CAPRIN1-213ENST00000533562 M0R2T5 61 aa6.56□□□□□ -1.36
CAPRIN1-213ENST00000533562 ATP11AUNQ6ZP68 121 aa6.56□□□□□ -1.36
CAPRIN1-213ENST00000533562 C14orf132Q9NPU4 83 aa6.54□□□□□ -1.36
CAPRIN1-213ENST00000533562 H7BZZ5 65 aa6.53□□□□□ -1.36
CAPRIN1-213ENST00000533562 SEC61GP60059 68 aa6.53□□□□□ -1.36
CAPRIN1-213ENST00000533562 CXCL6P80162 114 aa6.53□□□□□ -1.36
CAPRIN1-213ENST00000533562 Q75L30 129 aa6.53□□□□□ -1.36
CAPRIN1-213ENST00000533562 C20orf197Q8N268 126 aa6.53□□□□□ -1.36
CAPRIN1-213ENST00000533562 CRCT1Q9UGL9 99 aa6.53□□□□□ -1.36
CAPRIN1-213ENST00000533562 KRTAP10-6P60371 365 aaPredicted RBP6.52□□□□□ -1.37
CAPRIN1-213ENST00000533562 FAM218AQ96MZ4 157 aa6.52□□□□□ -1.37
CAPRIN1-213ENST00000533562 CYSTM1Q9H1C7 97 aa6.51□□□□□ -1.37
CAPRIN1-213ENST00000533562 FLGP20930 4061 aaPredicted RBP6.5□□□□□ -1.37
CAPRIN1-213ENST00000533562 LOC110117498A0A087WWA1 95 aa6.5□□□□□ -1.37
CAPRIN1-213ENST00000533562 Q96NJ1 140 aa6.5□□□□□ -1.37
CAPRIN1-213ENST00000533562 A0A087WVE0 104 aa6.49□□□□□ -1.37
CAPRIN1-213ENST00000533562 RBM3P98179 157 aaKnown RBP6.47□□□□□ -1.37
CAPRIN1-213ENST00000533562 A0A087WSZ3 146 aa6.46□□□□□ -1.38
CAPRIN1-213ENST00000533562 A0A0A0MQY5 61 aa6.44□□□□□ -1.38
CAPRIN1-213ENST00000533562 C20orf166-AS1Q96NR2 134 aa6.44□□□□□ -1.38
CAPRIN1-213ENST00000533562 PRR15Q8IV56 129 aa6.43□□□□□ -1.38
CAPRIN1-213ENST00000533562 A8MUU9 505 aa6.42□□□□□ -1.38
CAPRIN1-213ENST00000533562 BRK1Q8WUW1 75 aa6.42□□□□□ -1.38
CAPRIN1-213ENST00000533562 Q6ZQT0 140 aa6.4□□□□□ -1.38
CAPRIN1-213ENST00000533562 TRBV7-4A0A0J9YYF1 115 aa6.39□□□□□ -1.39
CAPRIN1-213ENST00000533562 A0A1W2PNM2 257 aa6.39□□□□□ -1.39
CAPRIN1-213ENST00000533562 A0A1B0GW54 56 aa6.38□□□□□ -1.39
CAPRIN1-213ENST00000533562 DSCR10P59022 87 aa6.38□□□□□ -1.39
CAPRIN1-213ENST00000533562 LINC00313P59037 77 aa6.38□□□□□ -1.39
CAPRIN1-213ENST00000533562 PMAIP1Q13794 54 aa6.38□□□□□ -1.39
CAPRIN1-213ENST00000533562 TMEM254Q8TBM7 123 aa6.37□□□□□ -1.39
CAPRIN1-213ENST00000533562 IGKV4-1P06312 121 aa6.36□□□□□ -1.39
CAPRIN1-213ENST00000533562 NREPQ16612 68 aa6.36□□□□□ -1.39
CAPRIN1-213ENST00000533562 Q6ZVQ6 151 aa6.36□□□□□ -1.39
CAPRIN1-213ENST00000533562 Q1T7F1 81 aa6.35□□□□□ -1.39
CAPRIN1-213ENST00000533562 KRTAP4-8Q9BYQ9 185 aa6.34□□□□□ -1.39
CAPRIN1-213ENST00000533562 BPY2O14599 106 aa6.32□□□□□ -1.4
CAPRIN1-213ENST00000533562 SNURFQ9Y675 71 aa6.32□□□□□ -1.4
CAPRIN1-213ENST00000533562 DEFB116Q30KQ4 102 aa6.3□□□□□ -1.4
CAPRIN1-213ENST00000533562 LINC00472Q9H8W2 130 aa6.3□□□□□ -1.4
CAPRIN1-213ENST00000533562 KRTAP16-1A8MUX0 517 aa6.29□□□□□ -1.4
CAPRIN1-213ENST00000533562 NDUFB1O75438 58 aa6.29□□□□□ -1.4
CAPRIN1-213ENST00000533562 IGHV6-1A0A0B4J1U7 121 aa6.28□□□□□ -1.4
CAPRIN1-213ENST00000533562 NOTCH2NLQ7Z3S9 236 aa6.27□□□□□ -1.41
CAPRIN1-213ENST00000533562 RBM12B-AS1Q9P1G2 102 aa6.27□□□□□ -1.41
CAPRIN1-213ENST00000533562 KRTAP9-8Q9BYQ0 159 aa6.26□□□□□ -1.41
CAPRIN1-213ENST00000533562 OCR1Q9BZK8 76 aa6.26□□□□□ -1.41
CAPRIN1-213ENST00000533562 CYP4F30PQ9H0H9 118 aa6.26□□□□□ -1.41
CAPRIN1-213ENST00000533562 hDV103S1A0JD37 113 aa6.25□□□□□ -1.41
CAPRIN1-213ENST00000533562 C8orf87E5RJ46 101 aa6.24□□□□□ -1.41
CAPRIN1-213ENST00000533562 MPLKIPQ8TAP9 179 aa6.24□□□□□ -1.41
CAPRIN1-213ENST00000533562 NDUFS5O43920 106 aa6.23□□□□□ -1.41
CAPRIN1-213ENST00000533562 A0A1B0GVX0 72 aa6.22□□□□□ -1.41
CAPRIN1-213ENST00000533562 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.22□□□□□ -1.41
CAPRIN1-213ENST00000533562 HRES1P13985 223 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 167.4 ms